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The map label for this gene is ygfS [C]

Identifier: 197116713

GI number: 197116713

Start: 386477

End: 387202

Strand: Reverse

Name: ygfS [C]

Synonym: Gbem_0313

Alternate gene names: 197116713

Gene position: 387202-386477 (Counterclockwise)

Preceding gene: 197116715

Following gene: 197116712

Centisome position: 8.39

GC content: 61.02

Gene sequence:

>726_bases
ATGGACAAGGGGAAAATGGAATCTTGCGGAAGCTATGACAGGACAACCCTCACCCGCCGGGAATTTATCAAAGGGGTCGG
GATAGGGGGTGGCGCACTCGTTCTGCTCGGACAATTCGGAGTCCATTCGGCAGCCTGGGCGCTTGCGGGAGATCCTGCCC
TGAACATGGTGCTGATCGATTACGCCAAGTGCACCGGGTGCAGGACTTGTGAGGCCGCCTGTTCGTCGCGCAACCGGCCC
GTGTCGCTCAAGGGGCAGGAACTGCCGGGACTTGGCAACCCTCGCTACGCGAACATCCGTGTCCACAGCTTCAACCCTGA
CGTGGATGTACCCAACGTCTGCGCCATGTGCGCCGATACCCCATGCGTGAAGGCGTGCCCGGTCGAGCCGGACTCCAAAA
CCGGCAGGCGCGCCCTCTACCGGGACAACGTTACACACACAATCCACAACGATTCTGACCGGTGCCTCGGCTGCCGGAGC
TGTGCAAAGGCCTGCGCCGCACAGAGGACGGGGGTAATTTCTCCCGACCCGGCAACTGGCAAGCCTGAGCGCATGTGCAC
GCTCTGCGGTGGCGCCCCGCAATGCGTCAAGCGGTGCCCTTTCGGGGCGCTCTCGTATGTAGAGGTCAGGCGTGACCGAA
AGTTTTACGGGCTAGATCCTGAAAAAATTGCGGCTGAACTGGCCAAAACCTGGTACGGCACGGCCGACTTCGGAGGGTTA
AAATGA

Upstream 100 bases:

>100_bases
GGCAATAATTCAGAAGGATTGGTCTATCTCTTTTTCCATCACCTGCAGTAGAATCTTCCGACTATAGGTCATAAGAAGCG
AAGCTCCAACGGAGGCTCAC

Downstream 100 bases:

>100_bases
GCGGGAAACCGGGTTATCACGGCAAGATATTGAACATAGACCTTTCCACCGGGAAGATTGAAACGGTGCCCGTCCCCGCC
GAAGACTTCGATAAGTTCGT

Product: iron-sulfur cluster-binding oxidoreductase

Products: NA

Alternate protein names: Fe-S-Cluster; Fe-S Cluster-Containing Protein; Iron-Sulfur Protein; FAD/NADPH Dehydrogenase/Oxidoreductase Family Protein; Formate Dehydrogenase Beta Subunit

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MDKGKMESCGSYDRTTLTRREFIKGVGIGGGALVLLGQFGVHSAAWALAGDPALNMVLIDYAKCTGCRTCEAACSSRNRP
VSLKGQELPGLGNPRYANIRVHSFNPDVDVPNVCAMCADTPCVKACPVEPDSKTGRRALYRDNVTHTIHNDSDRCLGCRS
CAKACAAQRTGVISPDPATGKPERMCTLCGGAPQCVKRCPFGALSYVEVRRDRKFYGLDPEKIAAELAKTWYGTADFGGL
K

Sequences:

>Translated_241_residues
MDKGKMESCGSYDRTTLTRREFIKGVGIGGGALVLLGQFGVHSAAWALAGDPALNMVLIDYAKCTGCRTCEAACSSRNRP
VSLKGQELPGLGNPRYANIRVHSFNPDVDVPNVCAMCADTPCVKACPVEPDSKTGRRALYRDNVTHTIHNDSDRCLGCRS
CAKACAAQRTGVISPDPATGKPERMCTLCGGAPQCVKRCPFGALSYVEVRRDRKFYGLDPEKIAAELAKTWYGTADFGGL
K
>Mature_241_residues
MDKGKMESCGSYDRTTLTRREFIKGVGIGGGALVLLGQFGVHSAAWALAGDPALNMVLIDYAKCTGCRTCEAACSSRNRP
VSLKGQELPGLGNPRYANIRVHSFNPDVDVPNVCAMCADTPCVKACPVEPDSKTGRRALYRDNVTHTIHNDSDRCLGCRS
CAKACAAQRTGVISPDPATGKPERMCTLCGGAPQCVKRCPFGALSYVEVRRDRKFYGLDPEKIAAELAKTWYGTADFGGL
K

Specific function: Unknown

COG id: COG1142

COG function: function code C; Fe-S-cluster-containing hydrogenase components 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082179, Length=167, Percent_Identity=32.3353293413174, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789370, Length=218, Percent_Identity=28.8990825688073, Blast_Score=60, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25872; Mature: 25872

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
9.1 %Cys+Met (Translated Protein)
7.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
9.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKGKMESCGSYDRTTLTRREFIKGVGIGGGALVLLGQFGVHSAAWALAGDPALNMVLID
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHEECCCCCCEEEEEE
YAKCTGCRTCEAACSSRNRPVSLKGQELPGLGNPRYANIRVHSFNPDVDVPNVCAMCADT
HHHCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCC
PCVKACPVEPDSKTGRRALYRDNVTHTIHNDSDRCLGCRSCAKACAAQRTGVISPDPATG
CCCEECCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KPERMCTLCGGAPQCVKRCPFGALSYVEVRRDRKFYGLDPEKIAAELAKTWYGTADFGGL
CHHHEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
K
C
>Mature Secondary Structure
MDKGKMESCGSYDRTTLTRREFIKGVGIGGGALVLLGQFGVHSAAWALAGDPALNMVLID
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHEECCCCCCEEEEEE
YAKCTGCRTCEAACSSRNRPVSLKGQELPGLGNPRYANIRVHSFNPDVDVPNVCAMCADT
HHHCCCCCHHHHHHHCCCCCEEECCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHCCC
PCVKACPVEPDSKTGRRALYRDNVTHTIHNDSDRCLGCRSCAKACAAQRTGVISPDPATG
CCCEECCCCCCCCCCCCHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
KPERMCTLCGGAPQCVKRCPFGALSYVEVRRDRKFYGLDPEKIAAELAKTWYGTADFGGL
CHHHEEEECCCCHHHHHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA