| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is aor [H]
Identifier: 197116712
GI number: 197116712
Start: 384678
End: 386480
Strand: Reverse
Name: aor [H]
Synonym: Gbem_0312
Alternate gene names: 197116712
Gene position: 386480-384678 (Counterclockwise)
Preceding gene: 197116713
Following gene: 197116703
Centisome position: 8.37
GC content: 59.29
Gene sequence:
>1803_bases ATGAGCGGGAAACCGGGTTATCACGGCAAGATATTGAACATAGACCTTTCCACCGGGAAGATTGAAACGGTGCCCGTCCC CGCCGAAGACTTCGATAAGTTCGTGGGCGGGCAGGGACTGGGCATGAAGATACTCTGGGACCGGCTGAAGAAGCCGGGCG TCGACCCGCTTTCTCCGGATAACCTGCTCATGTTCATGCCGGGACCGTTTTCCGGGCTTCCGGTCCCGTCCTCGTCCAGG ACCTGCGTGGTGACCAAATCCCCTATCACGTCGCCTTTGAAATCCGACTACACGCACCCGTCCACCGTCACCTACTCGAA CATGGGAGGCTTTTTCGGACCCGAAGTCCGCTTTGCCGGCTATGACGGCATCGTGATCACCGGCAAGGCGCGGGTGCTTT CCTATGTCGTGATTGAGGACGACAAAGTGGAGATTCGCGAAGCCGCCAAGTTCAAGGGGATGCGAACCGATGCCTTCGAC CGGGCGTTCCTGGCGGAACTGGGGGACCGGCGATTCAAAACGGTATACATCGGCCCTGCCGGGGAGAATCTCGTTCCCTA TTCCAGCATCCTGCATACCGCAGGGCGGGCAGCAGGCCGGGGCGGTACCGGCTGCGTCATGGGTTCCAAGAATCTGAAAG CCATTGCGGTGCGAGGCACGGGACAACCGACTGTCGCCGATCATAAAGCGTTCCTTGCCGCGCTTGAAAACGCCAGACGC GCCCTCAACGGTTCCGCCTTTGCCAAATCCTGGGCGGAGCAGGGGACGGCGCGGGCCATCGTCGGCAACAGCAATGCCGG TACCGAGGCGGTTCGCAACTATCGCGAAGGGACTTTCACGGAGGCTGACAAGATCGGCGGCGATGCCGCCCGGCGCGATG TCTGGGTAAAGGACATAGCCTGTTACTGTTGTCCGCTCGCCTGCAAGAAAAGCGGTATGACGAAGGGTAAACACGGCGGG GTCGTCCACGACGGACCCGAGTACGAAACCGGCGTGATGCTCGGTTCAAACCTGATGATTTCCGATATGCCCGGACTGCT GAAGGCGATAACCACCATCGACGATCTCGGCCTGGACCAGATCTCCACCGGCAACGTCATCGGCTTTCTCATGGAAGCGT ACGAGCGTGGGTTGATCAATCGGAGTTTTCTAGACGGCATCGACCTTAAATGGGGAAGTGTCGATGCGACGCTGGCGATG ATCGAGAAGATTGCCGCCAAGGAGGGGGTGGGAGCCCTGGCCGCCGAGGGGGTGCGGGGCCTTTCCTGGCATATCGGCAA AGGGAGCGACAAGTTTGCCATCCAGGTGAAAGGGCTTGAGCTCGCTGCCCACAACATCCAGGCAAATCAGCCACGGGGGC TTTCCTACGTGACAGCGTCGCGGGGGGCCTGCCACATGAGCGGAGACAACATTGCCATGCAGAACAGGCGGGCCATGATG GATTCCACCGGCATGTGCTTTTTCCCTACCTTCGAACCGACGCTGGAAGAACCGATGTTAGCGCTGCTCAGTGCCATAAC CGGCCGGAAATTCGACAAGGCAGAGTTCGAAAAAGTGGGCGAGCGAATCTTCACCCTGGAAAAGCTGTTCAATTACCGCG AGGGGTTTCGCCGCGAAGACGACCGTCTCCCGGACCGTTTTTTCGAGGATGCCTTCACCGTTGGACCGAAAAAGGGAGCG GTGCTGGACCGGGAGAAGTTCGAGAGCATGCTCACCCAGTATTACCAGGATCGCGGATGGGATCCGGAGACCACCGAGCC CGGAAAGAAGAAGCTGAAGGAACTGGGGCTGGATACCATTTAG
Upstream 100 bases:
>100_bases AGGTCAGGCGTGACCGAAAGTTTTACGGGCTAGATCCTGAAAAAATTGCGGCTGAACTGGCCAAAACCTGGTACGGCACG GCCGACTTCGGAGGGTTAAA
Downstream 100 bases:
>100_bases ACGAGTCGCGTCCGCAGTACTTATGCCAGTTCCACTTTCAGGTTTTTACCGAGGGCAAGGGCCGCTCTTTCGAGGGTTTG AAGAGTGACGGAGACATTGG
Product: aldehyde ferredoxin oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSGKPGYHGKILNIDLSTGKIETVPVPAEDFDKFVGGQGLGMKILWDRLKKPGVDPLSPDNLLMFMPGPFSGLPVPSSSR TCVVTKSPITSPLKSDYTHPSTVTYSNMGGFFGPEVRFAGYDGIVITGKARVLSYVVIEDDKVEIREAAKFKGMRTDAFD RAFLAELGDRRFKTVYIGPAGENLVPYSSILHTAGRAAGRGGTGCVMGSKNLKAIAVRGTGQPTVADHKAFLAALENARR ALNGSAFAKSWAEQGTARAIVGNSNAGTEAVRNYREGTFTEADKIGGDAARRDVWVKDIACYCCPLACKKSGMTKGKHGG VVHDGPEYETGVMLGSNLMISDMPGLLKAITTIDDLGLDQISTGNVIGFLMEAYERGLINRSFLDGIDLKWGSVDATLAM IEKIAAKEGVGALAAEGVRGLSWHIGKGSDKFAIQVKGLELAAHNIQANQPRGLSYVTASRGACHMSGDNIAMQNRRAMM DSTGMCFFPTFEPTLEEPMLALLSAITGRKFDKAEFEKVGERIFTLEKLFNYREGFRREDDRLPDRFFEDAFTVGPKKGA VLDREKFESMLTQYYQDRGWDPETTEPGKKKLKELGLDTI
Sequences:
>Translated_600_residues MSGKPGYHGKILNIDLSTGKIETVPVPAEDFDKFVGGQGLGMKILWDRLKKPGVDPLSPDNLLMFMPGPFSGLPVPSSSR TCVVTKSPITSPLKSDYTHPSTVTYSNMGGFFGPEVRFAGYDGIVITGKARVLSYVVIEDDKVEIREAAKFKGMRTDAFD RAFLAELGDRRFKTVYIGPAGENLVPYSSILHTAGRAAGRGGTGCVMGSKNLKAIAVRGTGQPTVADHKAFLAALENARR ALNGSAFAKSWAEQGTARAIVGNSNAGTEAVRNYREGTFTEADKIGGDAARRDVWVKDIACYCCPLACKKSGMTKGKHGG VVHDGPEYETGVMLGSNLMISDMPGLLKAITTIDDLGLDQISTGNVIGFLMEAYERGLINRSFLDGIDLKWGSVDATLAM IEKIAAKEGVGALAAEGVRGLSWHIGKGSDKFAIQVKGLELAAHNIQANQPRGLSYVTASRGACHMSGDNIAMQNRRAMM DSTGMCFFPTFEPTLEEPMLALLSAITGRKFDKAEFEKVGERIFTLEKLFNYREGFRREDDRLPDRFFEDAFTVGPKKGA VLDREKFESMLTQYYQDRGWDPETTEPGKKKLKELGLDTI >Mature_599_residues SGKPGYHGKILNIDLSTGKIETVPVPAEDFDKFVGGQGLGMKILWDRLKKPGVDPLSPDNLLMFMPGPFSGLPVPSSSRT CVVTKSPITSPLKSDYTHPSTVTYSNMGGFFGPEVRFAGYDGIVITGKARVLSYVVIEDDKVEIREAAKFKGMRTDAFDR AFLAELGDRRFKTVYIGPAGENLVPYSSILHTAGRAAGRGGTGCVMGSKNLKAIAVRGTGQPTVADHKAFLAALENARRA LNGSAFAKSWAEQGTARAIVGNSNAGTEAVRNYREGTFTEADKIGGDAARRDVWVKDIACYCCPLACKKSGMTKGKHGGV VHDGPEYETGVMLGSNLMISDMPGLLKAITTIDDLGLDQISTGNVIGFLMEAYERGLINRSFLDGIDLKWGSVDATLAMI EKIAAKEGVGALAAEGVRGLSWHIGKGSDKFAIQVKGLELAAHNIQANQPRGLSYVTASRGACHMSGDNIAMQNRRAMMD STGMCFFPTFEPTLEEPMLALLSAITGRKFDKAEFEKVGERIFTLEKLFNYREGFRREDDRLPDRFFEDAFTVGPKKGAV LDREKFESMLTQYYQDRGWDPETTEPGKKKLKELGLDTI
Specific function: Catalyzes the oxidation of aldehydes to their corresponding carboxylic acids. May have a pyroglycolytic (saccharolytic) role [H]
COG id: COG2414
COG function: function code C; Aldehyde:ferredoxin oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AOR/FOR family [H]
Homologues:
Organism=Escherichia coli, GI1787962, Length=328, Percent_Identity=33.5365853658537, Blast_Score=142, Evalue=7e-35,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013985 - InterPro: IPR013983 - InterPro: IPR001203 [H]
Pfam domain/function: PF01314 AFOR_C; PF02730 AFOR_N [H]
EC number: =1.2.7.5 [H]
Molecular weight: Translated: 65158; Mature: 65027
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGKPGYHGKILNIDLSTGKIETVPVPAEDFDKFVGGQGLGMKILWDRLKKPGVDPLSPD CCCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC NLLMFMPGPFSGLPVPSSSRTCVVTKSPITSPLKSDYTHPSTVTYSNMGGFFGPEVRFAG CEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEC YDGIVITGKARVLSYVVIEDDKVEIREAAKFKGMRTDAFDRAFLAELGDRRFKTVYIGPA CCCEEEECCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCC GENLVPYSSILHTAGRAAGRGGTGCVMGSKNLKAIAVRGTGQPTVADHKAFLAALENARR CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH ALNGSAFAKSWAEQGTARAIVGNSNAGTEAVRNYREGTFTEADKIGGDAARRDVWVKDIA HHCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH CYCCPLACKKSGMTKGKHGGVVHDGPEYETGVMLGSNLMISDMPGLLKAITTIDDLGLDQ HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCC ISTGNVIGFLMEAYERGLINRSFLDGIDLKWGSVDATLAMIEKIAAKEGVGALAAEGVRG CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC LSWHIGKGSDKFAIQVKGLELAAHNIQANQPRGLSYVTASRGACHMSGDNIAMQNRRAMM CEEECCCCCCEEEEEEECEEEEECCCCCCCCCCCEEEECCCCEEEECCCCEEHHCCHHHH DSTGMCFFPTFEPTLEEPMLALLSAITGRKFDKAEFEKVGERIFTLEKLFNYREGFRRED CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DRLPDRFFEDAFTVGPKKGAVLDREKFESMLTQYYQDRGWDPETTEPGKKKLKELGLDTI HCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure SGKPGYHGKILNIDLSTGKIETVPVPAEDFDKFVGGQGLGMKILWDRLKKPGVDPLSPD CCCCCCCCEEEEEEECCCEEEEECCCHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCC NLLMFMPGPFSGLPVPSSSRTCVVTKSPITSPLKSDYTHPSTVTYSNMGGFFGPEVRFAG CEEEECCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCEEEECCCCCCCCCCEEEEC YDGIVITGKARVLSYVVIEDDKVEIREAAKFKGMRTDAFDRAFLAELGDRRFKTVYIGPA CCCEEEECCCEEEEEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEECCC GENLVPYSSILHTAGRAAGRGGTGCVMGSKNLKAIAVRGTGQPTVADHKAFLAALENARR CCCCCCHHHHHHHHHCCCCCCCCEEEECCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHH ALNGSAFAKSWAEQGTARAIVGNSNAGTEAVRNYREGTFTEADKIGGDAARRDVWVKDIA HHCCHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHH CYCCPLACKKSGMTKGKHGGVVHDGPEYETGVMLGSNLMISDMPGLLKAITTIDDLGLDQ HHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECCCHHHHHHHHHHHHCCCCC ISTGNVIGFLMEAYERGLINRSFLDGIDLKWGSVDATLAMIEKIAAKEGVGALAAEGVRG CCCCHHHHHHHHHHHHCCCCCHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCC LSWHIGKGSDKFAIQVKGLELAAHNIQANQPRGLSYVTASRGACHMSGDNIAMQNRRAMM CEEECCCCCCEEEEEEECEEEEECCCCCCCCCCCEEEECCCCEEEECCCCEEHHCCHHHH DSTGMCFFPTFEPTLEEPMLALLSAITGRKFDKAEFEKVGERIFTLEKLFNYREGFRRED CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCH DRLPDRFFEDAFTVGPKKGAVLDREKFESMLTQYYQDRGWDPETTEPGKKKLKELGLDTI HCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7642512; 7878465 [H]