| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is eriC [C]
Identifier: 197116692
GI number: 197116692
Start: 356920
End: 358287
Strand: Reverse
Name: eriC [C]
Synonym: Gbem_0292
Alternate gene names: 197116692
Gene position: 358287-356920 (Counterclockwise)
Preceding gene: 197116693
Following gene: 197116691
Centisome position: 7.76
GC content: 63.6
Gene sequence:
>1368_bases ATGCGCAAAAACCTCATGGTGCAACTGACCCTTTTGGCCAGTGTCCTCAAATGGGCCTCCTACGCCACGGCGGTGGGGGT TCTGGTGGGATGCGGCACCGCGGCCTTCCTCCGCTCCCTGGCCTGGACCTCCGACCAATACGCCCGTTTCCCTGACTATT ACCTGCTGCTCCCCGTCACGCTGGTCGCCAGCACGCTCCTGGTGCGGTGGTTGGCGCCGGAAGCGACCGGCCACGGGACG GAAAAGGTGATCGAGGCGGTGCACCAGCGGATGGGGAGAATCCCGCTCATGGTGGTGCCGGTGAAGCTCGCGGCCACGGT AATCACCCTGGCAGGGGGAGGCTCCGCCGGCAAGGAGGGTCCCTGCGCACAGATAGGCGCCGGCCTTGCCTCGGGCTTCG CCTCGCTGCTCAGGCTCAACGACGTCGACCGGCGCAAGATAGTCATCTGCGGCATCAGCGCCGGATTCGCCACCGTCTTC GGGACCCCGATAGCCGGGGCGCTTTTCGGCGTCGAGGTCCTGGTGCTGGGTCAGGTCTTCTACGACGTGCTCTTCCCCTC CTTCGTGGCGGGGATCGTCGGCTTCCACGTGGCTACGCTTCTGGGGGTCACCTATCCGCATCTGGCAGTGACCATCTTCC CGAAGGTCACCGGCTGGAACTTCGCCGAGATGCTCATGCTGGGGATCTGGTGCGGCCTCATCGCGCTCATTTTCATCGAG ATCATGCAGTGGGGGCACCGCCTGTTCGCTCGCCTTTCCTGGCACCCGGTGGCGAAGGCGCTATTTGGGGGGGGCCTGCT GGTACTGGTGGGAAGGTTCGTGTCGCTGCGCTACCTGGGGCTTGGCGTCGATTCCATAGAGGCTGGGCTAAACGGCGCGG TGCTCCCGATGGGCTCTACCTTCATGAAGATGTTAACTACTTCGATAACGCTCGCCTGCGGCGGGAGCGGCGGCGTGGTC ACCCCTATCTTCTTCATAGGTACCGCGGCGGGGAACCTCTTCGCGGTGCTGCTGCACGAGCCGCTGGTGGCGACGTTTTC GGCCATTGGGATGGCGGCGCTCCTTGCCGGGGCTGCAAACACGCCGATCGCCGCCTCAGTCATGGCCATGGAACTCTTCG GGGCCGCCATCGCCCCACACGCCGCCATCGCCTGCATGGTCAGCTTCCTCATTGTCGGATACCGCAGCATCTATCCAAGC CAGATCCTGGGGATCGAGAAGAGCGGCTCGCTGAAGGTGGAAACAGGCAAGCCGATGTCCCAGTTCGACCCCGAAAAGCT GGAAAGCGCTGCGGTCTCGCTCCCTGGCTTCATTCTGAAGGGAGTAAAGGTGATCCGCCGCCGCAGCTTCGAGAAAAAAA GAAAGTAA
Upstream 100 bases:
>100_bases AATGTCGCAGCCGAAAAGCCCCCCCTCCCTGGCGGGAGGGGGGTGATCGATAGCACTGGTCCGCCCCCAATTTTTCACAG GCGGCAGCCAAGGAACTGCA
Downstream 100 bases:
>100_bases AGCCCCAACTACTACCCGCCCCCCCCAGGAACTTCCCCCGGCATCTGTGACCGCCAGTTTCCCCCTGATCCTCATGGGAC GCTGGCTGTTTCTTCCTCAT
Product: voltage-gated chloride channel
Products: Cl Ion [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MRKNLMVQLTLLASVLKWASYATAVGVLVGCGTAAFLRSLAWTSDQYARFPDYYLLLPVTLVASTLLVRWLAPEATGHGT EKVIEAVHQRMGRIPLMVVPVKLAATVITLAGGGSAGKEGPCAQIGAGLASGFASLLRLNDVDRRKIVICGISAGFATVF GTPIAGALFGVEVLVLGQVFYDVLFPSFVAGIVGFHVATLLGVTYPHLAVTIFPKVTGWNFAEMLMLGIWCGLIALIFIE IMQWGHRLFARLSWHPVAKALFGGGLLVLVGRFVSLRYLGLGVDSIEAGLNGAVLPMGSTFMKMLTTSITLACGGSGGVV TPIFFIGTAAGNLFAVLLHEPLVATFSAIGMAALLAGAANTPIAASVMAMELFGAAIAPHAAIACMVSFLIVGYRSIYPS QILGIEKSGSLKVETGKPMSQFDPEKLESAAVSLPGFILKGVKVIRRRSFEKKRK
Sequences:
>Translated_455_residues MRKNLMVQLTLLASVLKWASYATAVGVLVGCGTAAFLRSLAWTSDQYARFPDYYLLLPVTLVASTLLVRWLAPEATGHGT EKVIEAVHQRMGRIPLMVVPVKLAATVITLAGGGSAGKEGPCAQIGAGLASGFASLLRLNDVDRRKIVICGISAGFATVF GTPIAGALFGVEVLVLGQVFYDVLFPSFVAGIVGFHVATLLGVTYPHLAVTIFPKVTGWNFAEMLMLGIWCGLIALIFIE IMQWGHRLFARLSWHPVAKALFGGGLLVLVGRFVSLRYLGLGVDSIEAGLNGAVLPMGSTFMKMLTTSITLACGGSGGVV TPIFFIGTAAGNLFAVLLHEPLVATFSAIGMAALLAGAANTPIAASVMAMELFGAAIAPHAAIACMVSFLIVGYRSIYPS QILGIEKSGSLKVETGKPMSQFDPEKLESAAVSLPGFILKGVKVIRRRSFEKKRK >Mature_455_residues MRKNLMVQLTLLASVLKWASYATAVGVLVGCGTAAFLRSLAWTSDQYARFPDYYLLLPVTLVASTLLVRWLAPEATGHGT EKVIEAVHQRMGRIPLMVVPVKLAATVITLAGGGSAGKEGPCAQIGAGLASGFASLLRLNDVDRRKIVICGISAGFATVF GTPIAGALFGVEVLVLGQVFYDVLFPSFVAGIVGFHVATLLGVTYPHLAVTIFPKVTGWNFAEMLMLGIWCGLIALIFIE IMQWGHRLFARLSWHPVAKALFGGGLLVLVGRFVSLRYLGLGVDSIEAGLNGAVLPMGSTFMKMLTTSITLACGGSGGVV TPIFFIGTAAGNLFAVLLHEPLVATFSAIGMAALLAGAANTPIAASVMAMELFGAAIAPHAAIACMVSFLIVGYRSIYPS QILGIEKSGSLKVETGKPMSQFDPEKLESAAVSLPGFILKGVKVIRRRSFEKKRK
Specific function: Selective chloride channel [C]
COG id: COG0038
COG function: function code P; Chloride channel protein EriC
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chloride channel (TC 2.A.49) family [H]
Homologues:
Organism=Escherichia coli, GI1786350, Length=385, Percent_Identity=29.6103896103896, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI87081943, Length=337, Percent_Identity=27.893175074184, Blast_Score=69, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014743 - InterPro: IPR001807 [H]
Pfam domain/function: PF00654 Voltage_CLC [H]
EC number: NA
Molecular weight: Translated: 48002; Mature: 48002
Theoretical pI: Translated: 10.07; Mature: 10.07
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKNLMVQLTLLASVLKWASYATAVGVLVGCGTAAFLRSLAWTSDQYARFPDYYLLLPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHH LVASTLLVRWLAPEATGHGTEKVIEAVHQRMGRIPLMVVPVKLAATVITLAGGGSAGKEG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEEECCCCCCCCC PCAQIGAGLASGFASLLRLNDVDRRKIVICGISAGFATVFGTPIAGALFGVEVLVLGQVF CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH YDVLFPSFVAGIVGFHVATLLGVTYPHLAVTIFPKVTGWNFAEMLMLGIWCGLIALIFIE HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IMQWGHRLFARLSWHPVAKALFGGGLLVLVGRFVSLRYLGLGVDSIEAGLNGAVLPMGST HHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCHH FMKMLTTSITLACGGSGGVVTPIFFIGTAAGNLFAVLLHEPLVATFSAIGMAALLAGAAN HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPIAASVMAMELFGAAIAPHAAIACMVSFLIVGYRSIYPSQILGIEKSGSLKVETGKPMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCC QFDPEKLESAAVSLPGFILKGVKVIRRRSFEKKRK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKNLMVQLTLLASVLKWASYATAVGVLVGCGTAAFLRSLAWTSDQYARFPDYYLLLPVT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHCCCCHHHHHHHH LVASTLLVRWLAPEATGHGTEKVIEAVHQRMGRIPLMVVPVKLAATVITLAGGGSAGKEG HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHHHHHHEEECCCCCCCCC PCAQIGAGLASGFASLLRLNDVDRRKIVICGISAGFATVFGTPIAGALFGVEVLVLGQVF CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHHHHHH YDVLFPSFVAGIVGFHVATLLGVTYPHLAVTIFPKVTGWNFAEMLMLGIWCGLIALIFIE HHHHHHHHHHHHHHHHHHHHHHCCCCHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH IMQWGHRLFARLSWHPVAKALFGGGLLVLVGRFVSLRYLGLGVDSIEAGLNGAVLPMGST HHHHHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEECCCHH FMKMLTTSITLACGGSGGVVTPIFFIGTAAGNLFAVLLHEPLVATFSAIGMAALLAGAAN HHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TPIAASVMAMELFGAAIAPHAAIACMVSFLIVGYRSIYPSQILGIEKSGSLKVETGKPMS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCEEEECCCCCC QFDPEKLESAAVSLPGFILKGVKVIRRRSFEKKRK CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Cl Ion [Periplasm] [C]
Specific reaction: Cl Ion [Periplasm] = Cl Ion [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]