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The map label for this gene is dgoA [C]

Identifier: 197116688

GI number: 197116688

Start: 348921

End: 349775

Strand: Direct

Name: dgoA [C]

Synonym: Gbem_0288

Alternate gene names: 197116688

Gene position: 348921-349775 (Clockwise)

Preceding gene: 197116687

Following gene: 197116689

Centisome position: 7.56

GC content: 64.21

Gene sequence:

>855_bases
ATGGCAGCGGATGCGAAGATAGAGCAGGTTGAAGCGCAGGCCTACAGGATCCCGACCGAAGACCCGGAAAGCGACGGAAG
TTACCGCTGGACCTCGACCACTCTCGTAACGGTGCATATTCAGGGCGGCGGCGCGCGAGGGTTCGGCTACAGTTACGCCG
ACGCAGCCGCCGCTACCCTGATTACCGGCAAGCTCGCCCAGATCATCAGCGGCCGAAACCCCGTCGATATCCCCTGCTGC
TGGCGCTTGATGCTGGATGGGGTCAGGAACCTGGGCGAGCCGGGAATAGCCATGCTCGCCATATCCGCAGTGGATGCGGC
GCTTTGGGACCTGAAGGGGAAGCTCCTGGAGCTTTCCGTAGTGGACCTCCTGGGGGTGGCACGGGAGGCGGTAACGGCCG
CCGGCGTTTCCTGGTTCGAGGAGCCGGTGGTCCATCACGACTTGGAGGGGCTCAGGATCTTGCGGGACCGGACCCCGGCA
GGCATGGAGATCGCAGCGGGAGAGTACGGCTTCACCCTCCCGTACTTTCGCCGCATGTTACAAGCGGGCGCAGTCGACGT
GCTGCAGGCGGACGCCACGCGCTGCGGCATCACCGGTTTTCTCCAGGCTGCGACCCTCTGCGAAAGTCATCACCTACAAC
TTTCGGCGCATTGCGCCCCCTCGCTGCACATCCACCCCTGCTGCGCCGCTCCGACCCTGCGGCACCTGGAATACTTCCAC
GACCACGCAAGGATCGAGAGCATGCTCTTCGACGGCTTCATTCAGCCGGTTGAGGGGAAGCTCGCGCCAGACCGCAGCCG
TCCCGGCCTCGGTATCGAACTGCGGGAGGGAGAAGCCAGCCACTTCAGGTTCTGA

Upstream 100 bases:

>100_bases
AAGGGGGACCCCAACCTAGGCGGCATCATCAGCCAATCGGTGAAGCAGATGATGTCGACCCTGCTGCCGCGAAGAGAAGA
GTAGCCGACGGGGAGGCGCC

Downstream 100 bases:

>100_bases
CCCCGCGCACTATCAAACAAAGGAGTCCTGCCATGCCCCAACCTGAGGAGAACGAGATATTCGTCGCGACCCAACTGAAT
CCGGGAGCGCTGGAGGCCGA

Product: enolase superfamily protein

Products: (R)-mandelate

Alternate protein names: Mandelate Racemase/Muconate Lactonizing; Mandelate Racemase/Muconate Lactonizing Family Protein; Mandelate Racemase; Mandelate Racemase/Muconate Lactonizing-Like Protein; Mandelate Racemase/Muconate Lactonizing Family Protein; Racemase; Mandalate Racemase; Mandelate Racemase Protein; Enolase Superfamily Protein

Number of amino acids: Translated: 284; Mature: 283

Protein sequence:

>284_residues
MAADAKIEQVEAQAYRIPTEDPESDGSYRWTSTTLVTVHIQGGGARGFGYSYADAAAATLITGKLAQIISGRNPVDIPCC
WRLMLDGVRNLGEPGIAMLAISAVDAALWDLKGKLLELSVVDLLGVAREAVTAAGVSWFEEPVVHHDLEGLRILRDRTPA
GMEIAAGEYGFTLPYFRRMLQAGAVDVLQADATRCGITGFLQAATLCESHHLQLSAHCAPSLHIHPCCAAPTLRHLEYFH
DHARIESMLFDGFIQPVEGKLAPDRSRPGLGIELREGEASHFRF

Sequences:

>Translated_284_residues
MAADAKIEQVEAQAYRIPTEDPESDGSYRWTSTTLVTVHIQGGGARGFGYSYADAAAATLITGKLAQIISGRNPVDIPCC
WRLMLDGVRNLGEPGIAMLAISAVDAALWDLKGKLLELSVVDLLGVAREAVTAAGVSWFEEPVVHHDLEGLRILRDRTPA
GMEIAAGEYGFTLPYFRRMLQAGAVDVLQADATRCGITGFLQAATLCESHHLQLSAHCAPSLHIHPCCAAPTLRHLEYFH
DHARIESMLFDGFIQPVEGKLAPDRSRPGLGIELREGEASHFRF
>Mature_283_residues
AADAKIEQVEAQAYRIPTEDPESDGSYRWTSTTLVTVHIQGGGARGFGYSYADAAAATLITGKLAQIISGRNPVDIPCCW
RLMLDGVRNLGEPGIAMLAISAVDAALWDLKGKLLELSVVDLLGVAREAVTAAGVSWFEEPVVHHDLEGLRILRDRTPAG
MEIAAGEYGFTLPYFRRMLQAGAVDVLQADATRCGITGFLQAATLCESHHLQLSAHCAPSLHIHPCCAAPTLRHLEYFHD
HARIESMLFDGFIQPVEGKLAPDRSRPGLGIELREGEASHFRF

Specific function: D-galactonate degradation; first step. D-galactonate degradation; third step. [C]

COG id: COG4948

COG function: function code MR; L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.1.2.2

Molecular weight: Translated: 30829; Mature: 30697

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00908 MR_MLE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAADAKIEQVEAQAYRIPTEDPESDGSYRWTSTTLVTVHIQGGGARGFGYSYADAAAATL
CCCCCHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHH
ITGKLAQIISGRNPVDIPCCWRLMLDGVRNLGEPGIAMLAISAVDAALWDLKGKLLELSV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
VDLLGVAREAVTAAGVSWFEEPVVHHDLEGLRILRDRTPAGMEIAAGEYGFTLPYFRRML
HHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH
QAGAVDVLQADATRCGITGFLQAATLCESHHLQLSAHCAPSLHIHPCCAAPTLRHLEYFH
HHCCHHHHHHCCHHCCHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCHHHHHHHHHH
DHARIESMLFDGFIQPVEGKLAPDRSRPGLGIELREGEASHFRF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC
>Mature Secondary Structure 
AADAKIEQVEAQAYRIPTEDPESDGSYRWTSTTLVTVHIQGGGARGFGYSYADAAAATL
CCCCHHHHHHHHHEECCCCCCCCCCCEEEEEEEEEEEEEECCCCCCCCCCHHHHHHHHH
ITGKLAQIISGRNPVDIPCCWRLMLDGVRNLGEPGIAMLAISAVDAALWDLKGKLLELSV
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
VDLLGVAREAVTAAGVSWFEEPVVHHDLEGLRILRDRTPAGMEIAAGEYGFTLPYFRRML
HHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHCCCCCCCEEECCCCCCCHHHHHHHH
QAGAVDVLQADATRCGITGFLQAATLCESHHLQLSAHCAPSLHIHPCCAAPTLRHLEYFH
HHCCHHHHHHCCHHCCHHHHHHHHHHHHHCCEEEEECCCCCCEECCCCCCHHHHHHHHHH
DHARIESMLFDGFIQPVEGKLAPDRSRPGLGIELREGEASHFRF
HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: (S)-mandelate

Specific reaction: (S)-mandelate = (R)-mandelate

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA