| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116684
Identifier: 197116684
GI number: 197116684
Start: 342849
End: 344585
Strand: Direct
Name: 197116684
Synonym: Gbem_0284
Alternate gene names: NA
Gene position: 342849-344585 (Clockwise)
Preceding gene: 197116683
Following gene: 197116686
Centisome position: 7.43
GC content: 64.42
Gene sequence:
>1737_bases ATGGAGGTTGGAGGTAACTCCGCGCACCTGCCGGTGCGAGGCCGCAAAGAACCGCTGGTGCGACGCATGAGGATGAGAGA GCTGTCAAACCCCGAATCCGACCGTCGAAGCATCCTGCGATGGGGAGGCCTCGCCGCGTCCCTTGCCCTTTTTCTCGTGG CGCTTCTGGCCCCGGCGCGCCCGGCCTCCTCGTCCTATCTGGAGTTGCCTCCAATACCTGCCGCATCCGCGCCTCAAACC GCAGCACCCTCCCCACCTGCCGCATCCGCTTCCCAAGCCGCAGCGTCGCCCGCGCCTGCCGACGCCGTCGGATTCCAACT CGCCCCCGCGCCGCGGGACGCTGAAACCGCACGTTTTCGCAGCCAGTTCCGCGCCGAGTACCCCATCGAGCCTTGGACCG CGCTCGGCGACCTTACGCCCTCGTTCGTCCTGCAACAGGGGGAGTACGGCGGCCGCGGCTACGCCGTCCTTGCCGAGATG GGGGACATCCGCATCAAGCAGACTCCCAACACCCTTAACGAAGCCGCCGGTCGCGGCGGTCGTTTCGCCCTTCTTACCGG CAACTCAGGCAACACCGCGAAACTGGAGACCTTCGCCGCCTCCGGCCAGCACGGCGCCACACACGACGACCTGTTGGTGG GTGCGACGGGAGAACTCTCTCTCATGGGGGATAGCGCCCGGTTCAAGACCATCCTTTTGAGCGGCCGCAGGTCCCTGTAC AGCGAGGGGCGCTGGCCGTCCGGCGCGGAAAAGGGTGACGTGCTGGGGCTGGTCGCCGCCGTCGATCCCTTCGGCGGCAG GCTCGCAGCCGAGGCGGAAATCGACTACTCGAGCTACGACGGCGACACGACTGACGAGACCGCGGCCACGCGCGACTCCG CCCGTCGGCTCAAAGTAGGGGGAGGATGGGGCGCCAGCCGCTACAGCGCCCTCTATGAGCGAACCGGCCCGCGCTATCGC CTCCTCACCGGCTGCGGCCCTGAGAGGGACACGGAGGGGGTAAGCCTCGGGTTCGGACACGCCTTCGAGCTCCATTCCTT CGACGTCAAGCTCTCCCGTTACAACGACAACACGGAAAAGAACGACCTGTCGCCAAGGCTCTACCGGTACGAGGGGCTGG TGGACTACCACTTCAAGGTGTTCAGCAAGCTGCAGCTTTCGCTGCAATACAAGAAGAGATTCGTCGACAGCACCAAGGAA CCTTTGGGGTATCTCCCCAAGGAGGTGGAAGAGGATGCGGTCTCTGGGCAGCTTAACTACCTGACGGGAAGATGGGATCT GGGGCTTAGGGGTGGGGTGTCGCAAAGGACCGACAAGCTGCACCGGCAAAGGGAGTCGAGCACCGAGAGCATCGGCTTCC TTACCAAATTCAGCGCGGCAGGCGTGACCGTTTTGCCGGATCTCTCCCTGAAGCGGGTCACGGATTACAGTTCCAGCCAG CGCACCGACCAGTATGCGGTGAACCTGGGGCTGAACGGGACCCTGTTGGAAAAGCGGCTCGACTACGAGGTGAAGGGGGG GTACAAGCAGGAGCGAACCGGCGTCCCCGGGACCGGGAAACAGGTGGTGGGAGCCAAGGTGAGGGCGGCCTATCCGCTGG CGCGGCTTTTCAAGTGGTTTCATCCCCCTTCACTGGGGGTGAAGGGGGAGTTCAAGGAGATCAACGACCGCGGCGCCGAC AGCAGGGAGAGCGATTTCTCCCTGCTGATCTCGCTGGACGGCGGAAACTTCTTGTAA
Upstream 100 bases:
>100_bases CAATCCGTACATATACAGGCCTTACCTGCAGCACCTGCAACAGCGGCGAGCACCCGAACGGGAGCCCGCCGCACTCAATT TCCCCCCCCCGGGGGATGCA
Downstream 100 bases:
>100_bases AAGCAGATTAAGAGTGAAACAGATTAAGATTAAGAGAAAGCGGCAGACAAAGGCCTTTAGTCTTGATCTCAATCTTAATC TTAATCTGTTTTATCTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD SRESDFSLLISLDGGNFL
Sequences:
>Translated_578_residues MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD SRESDFSLLISLDGGNFL >Mature_578_residues MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPARPASSSYLELPPIPAASAPQT AAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFRSQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEM GDIRIKQTPNTLNEAAGRGGRFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVGGGWGASRYSALYERTGPRYR LLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEKNDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKE PLGYLPKEVEEDAVSGQLNYLTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWFHPPSLGVKGEFKEINDRGAD SRESDFSLLISLDGGNFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62713; Mature: 62713
Theoretical pI: Translated: 9.24; Mature: 9.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPAR CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC PASSSYLELPPIPAASAPQTAAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFR CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCEEECCCCCCHHHHHHH SQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEMGDIRIKQTPNTLNEAAGRGG HHHCCCCCCCCHHHHHCCCHHHHEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCC RFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY EEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCHHHH SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVG HCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEC GGWGASRYSALYERTGPRYRLLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEK CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCCC NDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKEPLGYLPKEVEEDAVSGQLNY CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCEEEE LTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEECCCCHHHHHCCCCCC RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWF CCCEEEEEECCCCHHHHHHCCEEECCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHH HPPSLGVKGEFKEINDRGADSRESDFSLLISLDGGNFL CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCC >Mature Secondary Structure MEVGGNSAHLPVRGRKEPLVRRMRMRELSNPESDRRSILRWGGLAASLALFLVALLAPAR CCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHCCCC PASSSYLELPPIPAASAPQTAAPSPPAASASQAAASPAPADAVGFQLAPAPRDAETARFR CCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCHHCCEEECCCCCCHHHHHHH SQFRAEYPIEPWTALGDLTPSFVLQQGEYGGRGYAVLAEMGDIRIKQTPNTLNEAAGRGG HHHCCCCCCCCHHHHHCCCHHHHEECCCCCCCCEEEEEECCCEEEEECCCHHHHHCCCCC RFALLTGNSGNTAKLETFAASGQHGATHDDLLVGATGELSLMGDSARFKTILLSGRRSLY EEEEEECCCCCCEEEEEEECCCCCCCCCCCEEEECCCCEEEECCCCCEEEEEECCCHHHH SEGRWPSGAEKGDVLGLVAAVDPFGGRLAAEAEIDYSSYDGDTTDETAATRDSARRLKVG HCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCCEEEEC GGWGASRYSALYERTGPRYRLLTGCGPERDTEGVSLGFGHAFELHSFDVKLSRYNDNTEK CCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEEEEEEEEEECCCCCCC NDLSPRLYRYEGLVDYHFKVFSKLQLSLQYKKRFVDSTKEPLGYLPKEVEEDAVSGQLNY CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHCCEEEE LTGRWDLGLRGGVSQRTDKLHRQRESSTESIGFLTKFSAAGVTVLPDLSLKRVTDYSSSQ EEEEECCCCCCCCHHHHHHHHHHHHCCCHHHHHHEECCCCCEEEECCCCHHHHHCCCCCC RTDQYAVNLGLNGTLLEKRLDYEVKGGYKQERTGVPGTGKQVVGAKVRAAYPLARLFKWF CCCEEEEEECCCCHHHHHHCCEEECCCCCHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHH HPPSLGVKGEFKEINDRGADSRESDFSLLISLDGGNFL CCCCCCCCCCHHHHCCCCCCCCCCCEEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA