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The map label for this gene is ydfK [H]

Identifier: 197116674

GI number: 197116674

Start: 331152

End: 331838

Strand: Direct

Name: ydfK [H]

Synonym: Gbem_0274

Alternate gene names: 197116674

Gene position: 331152-331838 (Clockwise)

Preceding gene: 197116671

Following gene: 197116675

Centisome position: 7.18

GC content: 64.05

Gene sequence:

>687_bases
ATGATCATGCAAGGAACAGCGGTAAACGCGGTGGCAATTGTTATCGGCAGCGTAGTCGGCCTAAAGGCCGGGCACCTGAT
CCCCACCCGGGTGCGGGGCACCGTGATGGCGGGAGTGGGGCTCGCCGTACTTCTCATCGGGTGCCAACTGGCCCTGAAGA
GCCGGGAACCGATGATCATCATCGGCTGCCTGATCGGCGGCGGCATCATCGGCGAGCTTTTGCGCATCGAGGAGCGCCTG
GAGAAGCTGGGGAACTGGATCGGCGACCGTTTCCAGGGAAGCGGGCAGGTGGCCGAGGGGTTCGTCACCGCGAGCCTTCT
TTTTTGCGTCGGCGCCATGGCCATCATGGGGTCGCTGCAGGACGGCCTGGGTTCCCGCCCCGAGATCCTCTACGCCAAGG
CCGCCCTCGACGGCATCACCTCCGTGGCTCTCGCCTCCACACTAGGCGTCGGCGTCCTCTTCTCGTCATTGGCCGTTTTC
GTCTACCAGGGGGCCATCACCCTGAGCGCGACGCTGGCCCAGCAGCTGATGACGCCTGCAGTGGTGCAGGAGATGAACGC
CGTAGGAGGGCTGCTGATCCTCGCCATAGGACTCGATCTTTTGGGGATGAAACGGGTTCCGGTGGGAAACCTTCTTCCCG
CCGTGTTCCTGGCGCCCCCCCTGGTCATGCTCTTTGCCTCCTCCTGA

Upstream 100 bases:

>100_bases
TATTGTATACCTTCCGTCTTGCCGTACTTGTTTTCCGGCAGCCGAAACAGGGAAGGCAATTTTGCTTGCCTTTAGGCGGC
CGACTATCTATCTTGGCGCG

Downstream 100 bases:

>100_bases
CCCGCCTCGCGGGACTCAAAACCTTGACAATCACTTGTGCAATTGAATAACATGCCGTGTTTGCTTCGGCGTTCCACCTT
CGCCTACGGGCTTCGGTGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MIMQGTAVNAVAIVIGSVVGLKAGHLIPTRVRGTVMAGVGLAVLLIGCQLALKSREPMIIIGCLIGGGIIGELLRIEERL
EKLGNWIGDRFQGSGQVAEGFVTASLLFCVGAMAIMGSLQDGLGSRPEILYAKAALDGITSVALASTLGVGVLFSSLAVF
VYQGAITLSATLAQQLMTPAVVQEMNAVGGLLILAIGLDLLGMKRVPVGNLLPAVFLAPPLVMLFASS

Sequences:

>Translated_228_residues
MIMQGTAVNAVAIVIGSVVGLKAGHLIPTRVRGTVMAGVGLAVLLIGCQLALKSREPMIIIGCLIGGGIIGELLRIEERL
EKLGNWIGDRFQGSGQVAEGFVTASLLFCVGAMAIMGSLQDGLGSRPEILYAKAALDGITSVALASTLGVGVLFSSLAVF
VYQGAITLSATLAQQLMTPAVVQEMNAVGGLLILAIGLDLLGMKRVPVGNLLPAVFLAPPLVMLFASS
>Mature_228_residues
MIMQGTAVNAVAIVIGSVVGLKAGHLIPTRVRGTVMAGVGLAVLLIGCQLALKSREPMIIIGCLIGGGIIGELLRIEERL
EKLGNWIGDRFQGSGQVAEGFVTASLLFCVGAMAIMGSLQDGLGSRPEILYAKAALDGITSVALASTLGVGVLFSSLAVF
VYQGAITLSATLAQQLMTPAVVQEMNAVGGLLILAIGLDLLGMKRVPVGNLLPAVFLAPPLVMLFASS

Specific function: Unknown

COG id: COG1811

COG function: function code R; Uncharacterized membrane protein, possible Na+ channel or pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789338, Length=213, Percent_Identity=31.924882629108, Blast_Score=70, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007563 [H]

Pfam domain/function: PF04474 DUF554 [H]

EC number: NA

Molecular weight: Translated: 23352; Mature: 23352

Theoretical pI: Translated: 8.05; Mature: 8.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMQGTAVNAVAIVIGSVVGLKAGHLIPTRVRGTVMAGVGLAVLLIGCQLALKSREPMII
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IGCLIGGGIIGELLRIEERLEKLGNWIGDRFQGSGQVAEGFVTASLLFCVGAMAIMGSLQ
EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DGLGSRPEILYAKAALDGITSVALASTLGVGVLFSSLAVFVYQGAITLSATLAQQLMTPA
HCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQEMNAVGGLLILAIGLDLLGMKRVPVGNLLPAVFLAPPLVMLFASS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIMQGTAVNAVAIVIGSVVGLKAGHLIPTRVRGTVMAGVGLAVLLIGCQLALKSREPMII
CCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE
IGCLIGGGIIGELLRIEERLEKLGNWIGDRFQGSGQVAEGFVTASLLFCVGAMAIMGSLQ
EEHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
DGLGSRPEILYAKAALDGITSVALASTLGVGVLFSSLAVFVYQGAITLSATLAQQLMTPA
HCCCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVQEMNAVGGLLILAIGLDLLGMKRVPVGNLLPAVFLAPPLVMLFASS
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]