Click here to switch to the map view.

The map label for this gene is nirA [H]

Identifier: 197116671

GI number: 197116671

Start: 322023

End: 323303

Strand: Direct

Name: nirA [H]

Synonym: Gbem_0271

Alternate gene names: 197116671

Gene position: 322023-323303 (Clockwise)

Preceding gene: 197116670

Following gene: 197116674

Centisome position: 6.98

GC content: 67.92

Gene sequence:

>1281_bases
ATGACCGTGGAGAAGAACCTGCGCCTGGAGGGGATCTACCCCCAGCGCCAGAAGGAATTTTACATGCAGCGGGTGAAGCT
CCCCGCGGGGATCATATCCGCGGAGCAGGCGCTCAAGGTGGCGCAACTCGCAGAGCGCTTCGCCAAAGGGTTGGTGCACC
TGACCACCAGGGGGAGCATCGAGCTGCATTGGCTCACCGAAGGCGATCTTGAGTTCGTGGCGGGCCAGCTGGCGATGGTG
GGGCTTTACAACCGGGGTGCCTGCGGCGGCGCGGTACGCGGCGTGGTCTGCGGCAGCCTGGCGGCGGCCGGGGCCCCTGC
CTTGGAGGCCTTGGTGCGTAGGATCCACCGGCACTTCACCGGCAACGCGCGCTTCGAAAAACTCCCCAAGAAGTTCAAGG
TGGGCGTGGAGGCGGACGTCTCAAGCGGGCGGCACCTGATCCAGGATCTGGGGCTCGTGCCGGCGGCGTCGGGGGAACCT
TCGCGTTTCGACGTCTGGGCGGCCGGCGGCCTTGGGCGCGAGCCGATCCCCGGCTTCCTGCTGGCGCGGGACGTGGCCGA
GGATGCGCTGATTCCGTTGATCGAGCGGGTGGCCCGGGTTTACCAGGCCAATACCCCGGCGGGGAAGCGTCTGAAGCACC
TGATACGCGAGATCGGGCAGGACGAGTTTCGGCTGAGGGTCTTGGGAGACGCAGAGGAGATTTCCAGCGCGCCGACCCTG
ACGGGGAGCCTCGTTCCCGTGCCGGCGGACACGTCGGGGCGCCTGGAGGCGCATGTCTTCGCCGGCGAACTTTCCTGCCA
AGGTCTCGTTGCGCTGGCGGAGATCACCCGGGAGTACTGCGGCGGGATCCTGATGATAACCGGCGACCAGAACGTGAAGA
TGCATCTCTCCGAGGGTGGGGAGCGCGAGAAGGCTGTCGCCGCCCTGGCCGCAGCGGGGTTTGCCGGGGAGAGCGCCAGG
GAGAAAGTAATCTTCCGGGTCTGCCCGGGGACACACGAGTGCGTCATGGGGCTCTCTGCGACCCGCGAGGTCGCGGCGGC
CGTGGTGGAGCAGATGGGGGAGGAGGCGCTGGGGCTTACCTGGGCCATTTCCGGCTGCCCCAACTGCTGCGCGCAGCCCC
AGCTGGCGCAGGCGGGTATCGTCTCCTCCCGCCTCGTGACCGATCCGGCCGGGCGTGCGTCGCGTTTCGACCTGTACCGT
CCCGGCGCCGGCCCCTTTGCCGAGCCGGTGCAGCAGGGGCTCACCCTGCCGCAGCTTTTGGCGGAGGTGAAGAAAATCTG
A

Upstream 100 bases:

>100_bases
GTGAGCGGGTTTTCGGATGACAGGAGGGGAGCAACACTGTTACTATCGTCAGCCACCGCCACCGCAGCCAGCCGGCAGAG
CTTGGAAGGAGAGACAGATC

Downstream 100 bases:

>100_bases
AAAACAGATAAAGATAGAGATAGAGATAAAGAAAACCCCAAAAGCTCTCAAAACCGAAAAGCAGATAAAGATAGAGATAG
AGATTGAGGAAAGCCTAAAA

Product: nitrite/sulfite reductase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MTVEKNLRLEGIYPQRQKEFYMQRVKLPAGIISAEQALKVAQLAERFAKGLVHLTTRGSIELHWLTEGDLEFVAGQLAMV
GLYNRGACGGAVRGVVCGSLAAAGAPALEALVRRIHRHFTGNARFEKLPKKFKVGVEADVSSGRHLIQDLGLVPAASGEP
SRFDVWAAGGLGREPIPGFLLARDVAEDALIPLIERVARVYQANTPAGKRLKHLIREIGQDEFRLRVLGDAEEISSAPTL
TGSLVPVPADTSGRLEAHVFAGELSCQGLVALAEITREYCGGILMITGDQNVKMHLSEGGEREKAVAALAAAGFAGESAR
EKVIFRVCPGTHECVMGLSATREVAAAVVEQMGEEALGLTWAISGCPNCCAQPQLAQAGIVSSRLVTDPAGRASRFDLYR
PGAGPFAEPVQQGLTLPQLLAEVKKI

Sequences:

>Translated_426_residues
MTVEKNLRLEGIYPQRQKEFYMQRVKLPAGIISAEQALKVAQLAERFAKGLVHLTTRGSIELHWLTEGDLEFVAGQLAMV
GLYNRGACGGAVRGVVCGSLAAAGAPALEALVRRIHRHFTGNARFEKLPKKFKVGVEADVSSGRHLIQDLGLVPAASGEP
SRFDVWAAGGLGREPIPGFLLARDVAEDALIPLIERVARVYQANTPAGKRLKHLIREIGQDEFRLRVLGDAEEISSAPTL
TGSLVPVPADTSGRLEAHVFAGELSCQGLVALAEITREYCGGILMITGDQNVKMHLSEGGEREKAVAALAAAGFAGESAR
EKVIFRVCPGTHECVMGLSATREVAAAVVEQMGEEALGLTWAISGCPNCCAQPQLAQAGIVSSRLVTDPAGRASRFDLYR
PGAGPFAEPVQQGLTLPQLLAEVKKI
>Mature_425_residues
TVEKNLRLEGIYPQRQKEFYMQRVKLPAGIISAEQALKVAQLAERFAKGLVHLTTRGSIELHWLTEGDLEFVAGQLAMVG
LYNRGACGGAVRGVVCGSLAAAGAPALEALVRRIHRHFTGNARFEKLPKKFKVGVEADVSSGRHLIQDLGLVPAASGEPS
RFDVWAAGGLGREPIPGFLLARDVAEDALIPLIERVARVYQANTPAGKRLKHLIREIGQDEFRLRVLGDAEEISSAPTLT
GSLVPVPADTSGRLEAHVFAGELSCQGLVALAEITREYCGGILMITGDQNVKMHLSEGGEREKAVAALAAAGFAGESARE
KVIFRVCPGTHECVMGLSATREVAAAVVEQMGEEALGLTWAISGCPNCCAQPQLAQAGIVSSRLVTDPAGRASRFDLYRP
GAGPFAEPVQQGLTLPQLLAEVKKI

Specific function: Unknown

COG id: COG0155

COG function: function code P; Sulfite reductase, beta subunit (hemoprotein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nitrite and sulfite reductase 4Fe-4S domain family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005117
- InterPro:   IPR006067
- InterPro:   IPR006066 [H]

Pfam domain/function: PF01077 NIR_SIR; PF03460 NIR_SIR_ferr [H]

EC number: =1.7.7.1 [H]

Molecular weight: Translated: 45407; Mature: 45276

Theoretical pI: Translated: 7.48; Mature: 7.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVEKNLRLEGIYPQRQKEFYMQRVKLPAGIISAEQALKVAQLAERFAKGLVHLTTRGSI
CCCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCE
ELHWLTEGDLEFVAGQLAMVGLYNRGACGGAVRGVVCGSLAAAGAPALEALVRRIHRHFT
EEEEECCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GNARFEKLPKKFKVGVEADVSSGRHLIQDLGLVPAASGEPSRFDVWAAGGLGREPIPGFL
CCCHHHHCHHHHCCCCCCCHHCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH
LARDVAEDALIPLIERVARVYQANTPAGKRLKHLIREIGQDEFRLRVLGDAEEISSAPTL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
TGSLVPVPADTSGRLEAHVFAGELSCQGLVALAEITREYCGGILMITGDQNVKMHLSEGG
CCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCC
EREKAVAALAAAGFAGESAREKVIFRVCPGTHECVMGLSATREVAAAVVEQMGEEALGLT
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCEE
WAISGCPNCCAQPQLAQAGIVSSRLVTDPAGRASRFDLYRPGAGPFAEPVQQGLTLPQLL
EEECCCCCCCCCCCHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHH
AEVKKI
HHHHCC
>Mature Secondary Structure 
TVEKNLRLEGIYPQRQKEFYMQRVKLPAGIISAEQALKVAQLAERFAKGLVHLTTRGSI
CCCCCCEEECCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCE
ELHWLTEGDLEFVAGQLAMVGLYNRGACGGAVRGVVCGSLAAAGAPALEALVRRIHRHFT
EEEEECCCCHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCC
GNARFEKLPKKFKVGVEADVSSGRHLIQDLGLVPAASGEPSRFDVWAAGGLGREPIPGFL
CCCHHHHCHHHHCCCCCCCHHCCHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCHHH
LARDVAEDALIPLIERVARVYQANTPAGKRLKHLIREIGQDEFRLRVLGDAEEISSAPTL
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCHHHHCCCCCC
TGSLVPVPADTSGRLEAHVFAGELSCQGLVALAEITREYCGGILMITGDQNVKMHLSEGG
CCCEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCCCEEEEECCCC
EREKAVAALAAAGFAGESAREKVIFRVCPGTHECVMGLSATREVAAAVVEQMGEEALGLT
CHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCEE
WAISGCPNCCAQPQLAQAGIVSSRLVTDPAGRASRFDLYRPGAGPFAEPVQQGLTLPQLL
EEECCCCCCCCCCCHHHHCHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHHHCCCHHHHH
AEVKKI
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8490140 [H]