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The map label for this gene is mcp009 [C]

Identifier: 197116657

GI number: 197116657

Start: 305505

End: 306686

Strand: Reverse

Name: mcp009 [C]

Synonym: Gbem_0257

Alternate gene names: 197116657

Gene position: 306686-305505 (Counterclockwise)

Preceding gene: 197116659

Following gene: 197116652

Centisome position: 6.65

GC content: 62.44

Gene sequence:

>1182_bases
ATGAACCGGATCTGGAACTATTATCTCGACCTCACCATTAAATTCAGGCTGGGCCTGCTCTGCGTCTGCTACAGCCTCTG
CCTCGTTGCTTCGGTGATTGCCTCGCAGGCCGACTCGCCGCTGATCAAATACGGCTCCGTCACCCTCTTCATTGTCGCCG
GGGGACTGTTTGGCTGGGTCAACATCTGGTCCATCAGGAATCCCCTCGCCAGGGCCGTCTGTTATCTGGAGACCATGGGC
CACGGGGACCTGAGCGAGCAGATCGTAGTGAACCGCCATAACGAGATCAGCCAGATGCTGCACGCGGTGAAGAAACTTCA
GGAATCGATGCGGGGGATGCTCGCCGGCATCAAGCAGACCGCCGACCATCTCACCCTGGCGTCTTCCGAACTGAGCGCCA
CCTCGCAGCAGATGGCGCAAGGAACCGAGCATGCCTCGCGGCAATCCAACTCCGTCTCCAGCGCCGTGGTCGAGATGGCG
GGGGTGAGCAACGACATAGCTTTGAGCTGCCAGCAGATGGCGGACCGCGCGGGTAGCACCAGCAGCGCCACGACAAGGGG
GGAGGAGACCATCACCCGGATGACCTCGGTCATGGAGGAGATAGAGCGGATGGTGATCGGGACGGTGGACGCGGTCAAGG
CGCTGGGAACCAACTCCGACAAGATAGGCGACATCGTGGTGGCCATCGAGGACATCGCGGACCAGACCAACCTTTTGGCC
CTCAATGCGGCGATCGAAGCGGCACGTGCCGGGGAGCAGGGTCGGGGCTTCGCGGTGGTGGCCGACGAGGTGAGAAGGCT
CGCGGAACGGACCACCGCCTCGACCCATGAGGTGCAGAGCATCATCCGCAGCCTGCAGGGCAACGTGAAGAACGTGGTGG
GGCTGATGGAGCGGAGCGCCGGCAGTGTCAGAAGTGGGACGGAGGACGTGCAGCATTCCAGCCGCGCCATCGGGACCATC
AAGGAGCAGATAACGCCGCTTCTGGAGTACGTGTCGCAAGTGGCGATCGCGGCTGAGGAGCAGTCGGCGACCACGTCAAA
CATCACCGACAGCATGAGGGAAATAATCGGGGTGGTCGAGGAAGCGGCGAGCGGAGCGCAGAACTCGGCCCGCGCGGCGG
CGGAACTGGCCGCTTCGGCGCGCTCGTTACAGGAGATGGTGAACCGGTTTAAAACCGTCTAA

Upstream 100 bases:

>100_bases
GACCCGTCAAGTTTTCTCGACCCTCCCCGATAAGGCAGACGTATCAAAACATCGTTCGCCACCTGTAACGCGTTGGCGCA
TCACCGGCAAGGAGAAAGGC

Downstream 100 bases:

>100_bases
AACCAATTGACAATTGACAATGGATAATTGACAACGAAAAACCGAAACCCCGGTTCGTCGGGCATGGCATAGGCTGGCGA
GGGAGGCTTCAGGACCAAAG

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MNRIWNYYLDLTIKFRLGLLCVCYSLCLVASVIASQADSPLIKYGSVTLFIVAGGLFGWVNIWSIRNPLARAVCYLETMG
HGDLSEQIVVNRHNEISQMLHAVKKLQESMRGMLAGIKQTADHLTLASSELSATSQQMAQGTEHASRQSNSVSSAVVEMA
GVSNDIALSCQQMADRAGSTSSATTRGEETITRMTSVMEEIERMVIGTVDAVKALGTNSDKIGDIVVAIEDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRRLAERTTASTHEVQSIIRSLQGNVKNVVGLMERSAGSVRSGTEDVQHSSRAIGTI
KEQITPLLEYVSQVAIAAEEQSATTSNITDSMREIIGVVEEAASGAQNSARAAAELAASARSLQEMVNRFKTV

Sequences:

>Translated_393_residues
MNRIWNYYLDLTIKFRLGLLCVCYSLCLVASVIASQADSPLIKYGSVTLFIVAGGLFGWVNIWSIRNPLARAVCYLETMG
HGDLSEQIVVNRHNEISQMLHAVKKLQESMRGMLAGIKQTADHLTLASSELSATSQQMAQGTEHASRQSNSVSSAVVEMA
GVSNDIALSCQQMADRAGSTSSATTRGEETITRMTSVMEEIERMVIGTVDAVKALGTNSDKIGDIVVAIEDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRRLAERTTASTHEVQSIIRSLQGNVKNVVGLMERSAGSVRSGTEDVQHSSRAIGTI
KEQITPLLEYVSQVAIAAEEQSATTSNITDSMREIIGVVEEAASGAQNSARAAAELAASARSLQEMVNRFKTV
>Mature_393_residues
MNRIWNYYLDLTIKFRLGLLCVCYSLCLVASVIASQADSPLIKYGSVTLFIVAGGLFGWVNIWSIRNPLARAVCYLETMG
HGDLSEQIVVNRHNEISQMLHAVKKLQESMRGMLAGIKQTADHLTLASSELSATSQQMAQGTEHASRQSNSVSSAVVEMA
GVSNDIALSCQQMADRAGSTSSATTRGEETITRMTSVMEEIERMVIGTVDAVKALGTNSDKIGDIVVAIEDIADQTNLLA
LNAAIEAARAGEQGRGFAVVADEVRRLAERTTASTHEVQSIIRSLQGNVKNVVGLMERSAGSVRSGTEDVQHSSRAIGTI
KEQITPLLEYVSQVAIAAEEQSATTSNITDSMREIIGVVEEAASGAQNSARAAAELAASARSLQEMVNRFKTV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788194, Length=353, Percent_Identity=30.028328611898, Blast_Score=133, Evalue=2e-32,
Organism=Escherichia coli, GI1787690, Length=325, Percent_Identity=30.4615384615385, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI2367378, Length=296, Percent_Identity=29.7297297297297, Blast_Score=118, Evalue=7e-28,
Organism=Escherichia coli, GI1788195, Length=297, Percent_Identity=28.2828282828283, Blast_Score=115, Evalue=5e-27,
Organism=Escherichia coli, GI1789453, Length=389, Percent_Identity=27.2493573264781, Blast_Score=109, Evalue=3e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 42109; Mature: 42109

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRIWNYYLDLTIKFRLGLLCVCYSLCLVASVIASQADSPLIKYGSVTLFIVAGGLFGWV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEHHHHHHHHH
NIWSIRNPLARAVCYLETMGHGDLSEQIVVNRHNEISQMLHAVKKLQESMRGMLAGIKQT
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADHLTLASSELSATSQQMAQGTEHASRQSNSVSSAVVEMAGVSNDIALSCQQMADRAGST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
SSATTRGEETITRMTSVMEEIERMVIGTVDAVKALGTNSDKIGDIVVAIEDIADQTNLLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LNAAIEAARAGEQGRGFAVVADEVRRLAERTTASTHEVQSIIRSLQGNVKNVVGLMERSA
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
GSVRSGTEDVQHSSRAIGTIKEQITPLLEYVSQVAIAAEEQSATTSNITDSMREIIGVVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EAASGAQNSARAAAELAASARSLQEMVNRFKTV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNRIWNYYLDLTIKFRLGLLCVCYSLCLVASVIASQADSPLIKYGSVTLFIVAGGLFGWV
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCEEEEEHHHHHHHHH
NIWSIRNPLARAVCYLETMGHGDLSEQIVVNRHNEISQMLHAVKKLQESMRGMLAGIKQT
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADHLTLASSELSATSQQMAQGTEHASRQSNSVSSAVVEMAGVSNDIALSCQQMADRAGST
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCC
SSATTRGEETITRMTSVMEEIERMVIGTVDAVKALGTNSDKIGDIVVAIEDIADQTNLLA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
LNAAIEAARAGEQGRGFAVVADEVRRLAERTTASTHEVQSIIRSLQGNVKNVVGLMERSA
HHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHCC
GSVRSGTEDVQHSSRAIGTIKEQITPLLEYVSQVAIAAEEQSATTSNITDSMREIIGVVE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
EAASGAQNSARAAAELAASARSLQEMVNRFKTV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA