Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116619

Identifier: 197116619

GI number: 197116619

Start: 259968

End: 260678

Strand: Direct

Name: 197116619

Synonym: Gbem_0219

Alternate gene names: NA

Gene position: 259968-260678 (Clockwise)

Preceding gene: 197116618

Following gene: 197116621

Centisome position: 5.63

GC content: 61.6

Gene sequence:

>711_bases
ATGGAAAATGAGGCGCTGATACCGGCCCATGGCGGGTATCGCAACCTGAAGAGTTTTCAGGTGGCACAACTGGCCTATGA
TGTGACGGTCAGGTTTTGCGACCGCTACATAGGCAAAAGCAGCCGGACCCACGACCAGATGGTCCAGGCGGCGCGCAGCG
GCGTGCAGAACATCGCCGAAGGGAGCCAGGCTTCAGGCACCTCGAAAAAGACCGAGATGAAACTCACAAGTGTGGCTCGC
GCCAGCCTCGAAGAGCTGCGCCTGGACTACCAGGATTTTCTGCGCCAGCGGGGGCTTCCCCTGTGGGACCGCTCCGACCC
GCGCCGCCTTGCGCTGATAACCAGGAGGTGCCGAACGGCTGACGAGGTGGCACGGTGGGTGGTGGAAACCAGGAATGGAC
ACAATGGACTGAGTGGACGCTGTGGACATGGACCTGATGGACCTGATGGACCTGATGGACCCTGTGCGGCAACTGAGTCC
ATAAAGTCCACAGGGTCCATTGGGTCCAGGTCCATTGAGTCCACCAGGTCCACTGGCACTGCTCGCTCCGGCTACGCGGA
GGTTGCGGCCAATGCCGCTCTCACGCTCATCGCGGTGGCTTGCTCGCTGCTGGAAAGACAGCTCGCCGCCCAGGCGGCGG
CTTTCCAGAAAGAGGGAGGCTTCACCGAACGCCTCTACCGCACCCGCACCAGCTCCAGAAAGAACCCTTGA

Upstream 100 bases:

>100_bases
CGGAGGCCTTTTTGCGTCCGCAGGGGCTTGAGGCCTGTGTGGTAGAATCTGGAACTTCGCGTGAACGCGGTAAAGGTTCA
GGCGCGGGGAGGGAGTCGTC

Downstream 100 bases:

>100_bases
CCGCCCCCTACGACCCCAGATACCAAGCGCCACACCCCAACAGCGCATAGAGCGCGACCCCGGACGGCCTGGAAAAGGCG
ACCTTGAAATCCTGCCCGGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MENEALIPAHGGYRNLKSFQVAQLAYDVTVRFCDRYIGKSSRTHDQMVQAARSGVQNIAEGSQASGTSKKTEMKLTSVAR
ASLEELRLDYQDFLRQRGLPLWDRSDPRRLALITRRCRTADEVARWVVETRNGHNGLSGRCGHGPDGPDGPDGPCAATES
IKSTGSIGSRSIESTRSTGTARSGYAEVAANAALTLIAVACSLLERQLAAQAAAFQKEGGFTERLYRTRTSSRKNP

Sequences:

>Translated_236_residues
MENEALIPAHGGYRNLKSFQVAQLAYDVTVRFCDRYIGKSSRTHDQMVQAARSGVQNIAEGSQASGTSKKTEMKLTSVAR
ASLEELRLDYQDFLRQRGLPLWDRSDPRRLALITRRCRTADEVARWVVETRNGHNGLSGRCGHGPDGPDGPDGPCAATES
IKSTGSIGSRSIESTRSTGTARSGYAEVAANAALTLIAVACSLLERQLAAQAAAFQKEGGFTERLYRTRTSSRKNP
>Mature_236_residues
MENEALIPAHGGYRNLKSFQVAQLAYDVTVRFCDRYIGKSSRTHDQMVQAARSGVQNIAEGSQASGTSKKTEMKLTSVAR
ASLEELRLDYQDFLRQRGLPLWDRSDPRRLALITRRCRTADEVARWVVETRNGHNGLSGRCGHGPDGPDGPDGPCAATES
IKSTGSIGSRSIESTRSTGTARSGYAEVAANAALTLIAVACSLLERQLAAQAAAFQKEGGFTERLYRTRTSSRKNP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25677; Mature: 25677

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENEALIPAHGGYRNLKSFQVAQLAYDVTVRFCDRYIGKSSRTHDQMVQAARSGVQNIAE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GSQASGTSKKTEMKLTSVARASLEELRLDYQDFLRQRGLPLWDRSDPRRLALITRRCRTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCH
DEVARWVVETRNGHNGLSGRCGHGPDGPDGPDGPCAATESIKSTGSIGSRSIESTRSTGT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC
ARSGYAEVAANAALTLIAVACSLLERQLAAQAAAFQKEGGFTERLYRTRTSSRKNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MENEALIPAHGGYRNLKSFQVAQLAYDVTVRFCDRYIGKSSRTHDQMVQAARSGVQNIAE
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHC
GSQASGTSKKTEMKLTSVARASLEELRLDYQDFLRQRGLPLWDRSDPRRLALITRRCRTA
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCH
DEVARWVVETRNGHNGLSGRCGHGPDGPDGPDGPCAATESIKSTGSIGSRSIESTRSTGT
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCC
ARSGYAEVAANAALTLIAVACSLLERQLAAQAAAFQKEGGFTERLYRTRTSSRKNP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA