Click here to switch to the map view.

The map label for this gene is 197116618

Identifier: 197116618

GI number: 197116618

Start: 258607

End: 259806

Strand: Direct

Name: 197116618

Synonym: Gbem_0218

Alternate gene names: NA

Gene position: 258607-259806 (Clockwise)

Preceding gene: 197116616

Following gene: 197116619

Centisome position: 5.6

GC content: 61.5

Gene sequence:

>1200_bases
ATGAAGCAATTCGACGCCATCGTCATAGGTGCAGGAATCAGCGGACTCAGCTTTGCCAACTACTCTGCTGCCGCGGGACT
GAACACGCTGGTCCTGGAGAAGAGCGGCCGGGTGGGCGGGTGCTTCCATTCGCACCGCTTCGACGGTGAAGCGGCTGGCT
TCTGGCTCGAACTGGGGGCGCACACCTGTTACAACTCCTACCAGGGGTTGATCGGGCTTATGGAGCGGCACGGCATGATG
GAGAGCATCCTGGCCAGGGAGAAAGTCTCCTTCAAGATGCTTGTCGACAACGAGATAAAGAGCATAACCTCGCAACTCTC
CTTCCCCGAGCTGTTCGGCTCCGCATGGCGGATCTTCACCCTTAAAAAAGAGGGGGAGAGCGTCGCCTCCTACTACGGGC
GCATCGTGGGGCGCAAGAATTACGACCGGGTCTTCGCACCGGCTTTCAACGCGGTCATCTCGCAGCGCGCCAACGACTTT
CCCGCCGACATGCTCTTCAACAAGCGACCCAGGAGAAAAGACGTCATCAAGAGCTTCACCCTGCAGGGGGGGCTCAACAC
CGTGATCGACAAGCTCTCCGCCGCTGCCGGCATCACCGTTGTAACCGGCGCCGAGGTGGCCCGGGTGGCGCAGGGGGGGA
AAGGTTACGTCGTTGAACTCGCCGGCGGCGAGGGTTTCGAGGCGCCGCGGCTGGTTTTGGCCACCCCGCCCCCCGCATCC
GCGCAACTTTCCGGCGAGATCTCCCCCGAACTCTCCCGCCTCTTCACGCAGATCAAGGTGGAGAACATAGAGACGGTAGG
TGCCGCGGTCAAGAAAGGGAAGCTGACGCTCCCCTCCATGGCCGGCATCATCCCCATCGGCGAGAACTTCTATTCCGCCG
TTTCCCGGGACACCGTGCCGCACGACAGTTACCGCGGCTTCAGTTTCCACTTCAAGTCCGGGGGAGGGGCGCTGGAGGCT
AAGCTCAAACGGGTGGCAGCAGTGCTGCGCGTGAAACCGGAAGACCTCGAACAGGTAGTGCAGCGGGAAAGCCAGCTCCC
ATCGCCGGTGGTCGGGCACAAGGCGCTGACCGACCGGATCGACCAGATCACCTCCGGCCAGAAGCTGTACGTCACCGGCA
ACTACTTTGCCGGCATGGCCATAGAGGACTGCATCGTGCGGTCGAGAAAAGAATATGAGAGGTTCACGGCAGCGCTTTAG

Upstream 100 bases:

>100_bases
GGAACAAAGGTTGTCAACATGTTGTAAACCTTGACAAGCTGCGGCAGCCGGGCTTATATAAGCGCGTGATTAACGACTCT
TTAACGCGAGGAGCTGTCAG

Downstream 100 bases:

>100_bases
CGCTCGCAGTTGGACTATCGGACAGTACCGTAAGAAAAGGCCTCCCCCACCTCAGGTGATGCGGAGGCCTTTTTGCGTCC
GCAGGGGCTTGAGGCCTGTG

Product: protoporphyrinogen oxidase-like protein

Products: NA

Alternate protein names: Amine Oxidase; Protoporphyrinogen Oxidase; Protoporphyrinogen Oxidase-Like Protein

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MKQFDAIVIGAGISGLSFANYSAAAGLNTLVLEKSGRVGGCFHSHRFDGEAAGFWLELGAHTCYNSYQGLIGLMERHGMM
ESILAREKVSFKMLVDNEIKSITSQLSFPELFGSAWRIFTLKKEGESVASYYGRIVGRKNYDRVFAPAFNAVISQRANDF
PADMLFNKRPRRKDVIKSFTLQGGLNTVIDKLSAAAGITVVTGAEVARVAQGGKGYVVELAGGEGFEAPRLVLATPPPAS
AQLSGEISPELSRLFTQIKVENIETVGAAVKKGKLTLPSMAGIIPIGENFYSAVSRDTVPHDSYRGFSFHFKSGGGALEA
KLKRVAAVLRVKPEDLEQVVQRESQLPSPVVGHKALTDRIDQITSGQKLYVTGNYFAGMAIEDCIVRSRKEYERFTAAL

Sequences:

>Translated_399_residues
MKQFDAIVIGAGISGLSFANYSAAAGLNTLVLEKSGRVGGCFHSHRFDGEAAGFWLELGAHTCYNSYQGLIGLMERHGMM
ESILAREKVSFKMLVDNEIKSITSQLSFPELFGSAWRIFTLKKEGESVASYYGRIVGRKNYDRVFAPAFNAVISQRANDF
PADMLFNKRPRRKDVIKSFTLQGGLNTVIDKLSAAAGITVVTGAEVARVAQGGKGYVVELAGGEGFEAPRLVLATPPPAS
AQLSGEISPELSRLFTQIKVENIETVGAAVKKGKLTLPSMAGIIPIGENFYSAVSRDTVPHDSYRGFSFHFKSGGGALEA
KLKRVAAVLRVKPEDLEQVVQRESQLPSPVVGHKALTDRIDQITSGQKLYVTGNYFAGMAIEDCIVRSRKEYERFTAAL
>Mature_399_residues
MKQFDAIVIGAGISGLSFANYSAAAGLNTLVLEKSGRVGGCFHSHRFDGEAAGFWLELGAHTCYNSYQGLIGLMERHGMM
ESILAREKVSFKMLVDNEIKSITSQLSFPELFGSAWRIFTLKKEGESVASYYGRIVGRKNYDRVFAPAFNAVISQRANDF
PADMLFNKRPRRKDVIKSFTLQGGLNTVIDKLSAAAGITVVTGAEVARVAQGGKGYVVELAGGEGFEAPRLVLATPPPAS
AQLSGEISPELSRLFTQIKVENIETVGAAVKKGKLTLPSMAGIIPIGENFYSAVSRDTVPHDSYRGFSFHFKSGGGALEA
KLKRVAAVLRVKPEDLEQVVQRESQLPSPVVGHKALTDRIDQITSGQKLYVTGNYFAGMAIEDCIVRSRKEYERFTAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43314; Mature: 43314

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQFDAIVIGAGISGLSFANYSAAAGLNTLVLEKSGRVGGCFHSHRFDGEAAGFWLELGA
CCCCCEEEEECCCCCCEECCCHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCEEEECCC
HTCYNSYQGLIGLMERHGMMESILAREKVSFKMLVDNEIKSITSQLSFPELFGSAWRIFT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECHHHHHHHHHCCCHHHHCCCEEEEE
LKKEGESVASYYGRIVGRKNYDRVFAPAFNAVISQRANDFPADMLFNKRPRRKDVIKSFT
EECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHH
LQGGLNTVIDKLSAAAGITVVTGAEVARVAQGGKGYVVELAGGEGFEAPRLVLATPPPAS
HCCCHHHHHHHHHHHCCEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCC
AQLSGEISPELSRLFTQIKVENIETVGAAVKKGKLTLPSMAGIIPIGENFYSAVSRDTVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHCCCCC
HDSYRGFSFHFKSGGGALEAKLKRVAAVLRVKPEDLEQVVQRESQLPSPVVGHKALTDRI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DQITSGQKLYVTGNYFAGMAIEDCIVRSRKEYERFTAAL
HHHCCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKQFDAIVIGAGISGLSFANYSAAAGLNTLVLEKSGRVGGCFHSHRFDGEAAGFWLELGA
CCCCCEEEEECCCCCCEECCCHHHCCCEEEEEECCCCCCCEECCCCCCCCCCCEEEECCC
HTCYNSYQGLIGLMERHGMMESILAREKVSFKMLVDNEIKSITSQLSFPELFGSAWRIFT
HHHHHHHHHHHHHHHHCCHHHHHHHHHHCEEEEEECHHHHHHHHHCCCHHHHCCCEEEEE
LKKEGESVASYYGRIVGRKNYDRVFAPAFNAVISQRANDFPADMLFNKRPRRKDVIKSFT
EECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHH
LQGGLNTVIDKLSAAAGITVVTGAEVARVAQGGKGYVVELAGGEGFEAPRLVLATPPPAS
HCCCHHHHHHHHHHHCCEEEEECHHHHHHHCCCCEEEEEEECCCCCCCCEEEEECCCCCC
AQLSGEISPELSRLFTQIKVENIETVGAAVKKGKLTLPSMAGIIPIGENFYSAVSRDTVP
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCHHHHHHHHCCCCC
HDSYRGFSFHFKSGGGALEAKLKRVAAVLRVKPEDLEQVVQRESQLPSPVVGHKALTDRI
CCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHH
DQITSGQKLYVTGNYFAGMAIEDCIVRSRKEYERFTAAL
HHHCCCCEEEEECCCEECHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA