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The map label for this gene is yfkH [H]

Identifier: 197116537

GI number: 197116537

Start: 169630

End: 170580

Strand: Reverse

Name: yfkH [H]

Synonym: Gbem_0137

Alternate gene names: 197116537

Gene position: 170580-169630 (Counterclockwise)

Preceding gene: 197116538

Following gene: 197116528

Centisome position: 3.7

GC content: 59.94

Gene sequence:

>951_bases
ATGTTCTCACTGCGCAGATACTTCAAGCTGGGCGACACGAGCTACAAGGAACTGGCCAAACGGGCCTTCAAGAAATTCTC
GGAAGAGGACTGCCCGGAGCACGCCGCCGCCATGGCGTACTACTTCCTGTTCGCCTCCTTTCCATTCCTCCTCTTCCTGA
CCACGCTGATCGCCTACCTGCCGATCCCGCACCTACTGGATTACGTGCTGGACAACGCCTCCAGGGTTCTTCCCGGCGAA
ACTTTCACGCTGATCGAGGACAACATCCAGGCGCTGTTCACCAACAAGAAGCAAGGGCTCCTCTCCATGGGGATCGTCCT
TGCACTCTGGGCCTCCTCCAACGCTATCGTTTCCGTCATGGACGCCATGAACAACCTCTACGACGTCAAGGAAGGGCGCC
CCTTCTGGAAGGTGCGCCTGATCGCCATCGGGCTGGTGATCGGGCTGTCGGTGCTGTTCCTCGTTGCCATGGCGGCGCTC
ATGTTCGGCAACCAGATCGGCGACTACGTAGCCGGCCTGATCAACTTCGGCGGGGCGTTCAAGGTGGCATGGTTCGCCGC
CCTGGTGCCGGTCACCCTGTTCGTCCTCGTCCTCGCCGTCGCGGTCATTTACTACTTCACCCCCGACGTCGAGCACCAAT
GGGTCTGGATCAGCCCCGGCGCCGTGATCGCCATCCCGAGCTGGATCCTGATGTCCCTGGCGTTTTCGTATTACATCAAC
AACTTCGGCTCCTACGACAAGACCTACGGCAGTATCGGCGCGGTGATCGTGCTGCTGCTCTGGCTTTACCTGACCGGGCT
CATCATCCTGGCGGGCGCCGTGGTCAATTCGGTGATCGAGCACAGCTCTGCGGAAGGGAAGAAACCGGGTGAGAAGGTGG
CGGGAGAGGTGAGCGATCCGCGCGAGGACGTGAACGAAGAGATGAAGGAAGAAAAGGACCAGAAGCGCTAG

Upstream 100 bases:

>100_bases
TGACCGGGCAGGTGCTGCACCCAAACGGCGGAACCATCGTAGGAGGGTAGCTAACCCTTGCCTCGCAAGGTGGCAGGGTG
ACCACGTCAAGGAGCCGACC

Downstream 100 bases:

>100_bases
CACCGCGGTGAATAAGCCCAGCGCACGGCGCACTGTAAAAAGGGGACAGGCTGCTTTTTGATTGAAAAAGTAGCCTGTCC
CCTTTTGCTGCGGCTCCTCC

Product: ribonuclease BN family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MFSLRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIPHLLDYVLDNASRVLPGE
TFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAAL
MFGNQIGDYVAGLINFGGAFKVAWFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYIN
NFGSYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNSVIEHSSAEGKKPGEKVAGEVSDPREDVNEEMKEEKDQKR

Sequences:

>Translated_316_residues
MFSLRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIPHLLDYVLDNASRVLPGE
TFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAAL
MFGNQIGDYVAGLINFGGAFKVAWFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYIN
NFGSYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNSVIEHSSAEGKKPGEKVAGEVSDPREDVNEEMKEEKDQKR
>Mature_316_residues
MFSLRRYFKLGDTSYKELAKRAFKKFSEEDCPEHAAAMAYYFLFASFPFLLFLTTLIAYLPIPHLLDYVLDNASRVLPGE
TFTLIEDNIQALFTNKKQGLLSMGIVLALWASSNAIVSVMDAMNNLYDVKEGRPFWKVRLIAIGLVIGLSVLFLVAMAAL
MFGNQIGDYVAGLINFGGAFKVAWFAALVPVTLFVLVLAVAVIYYFTPDVEHQWVWISPGAVIAIPSWILMSLAFSYYIN
NFGSYDKTYGSIGAVIVLLLWLYLTGLIILAGAVVNSVIEHSSAEGKKPGEKVAGEVSDPREDVNEEMKEEKDQKR

Specific function: Unknown

COG id: COG1295

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017039
- InterPro:   IPR004664 [H]

Pfam domain/function: PF03631 Ribonuclease_BN [H]

EC number: NA

Molecular weight: Translated: 35175; Mature: 35175

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377 [H]