| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116526
Identifier: 197116526
GI number: 197116526
Start: 151341
End: 152213
Strand: Direct
Name: 197116526
Synonym: Gbem_0126
Alternate gene names: NA
Gene position: 151341-152213 (Clockwise)
Preceding gene: 197116513
Following gene: 197116529
Centisome position: 3.28
GC content: 58.19
Gene sequence:
>873_bases ATGAAGATAGACGTGGAGCAGTTCCAGGTTAAGGCAAAGGAGAAGGTGTCACTGAAGAGGCGGCCGACCGATGTGGCCCC TTTTTATCACTCAAAGGAACAGTACCAGGAGTGTCTCACCGAACAGATCGAGAGGCTGAGCGCCCTGCAGGGGCTTCTCT ATGCCAATAACAACTATGCCGTGCTCTTGATCTTCCAGGCCATGGACGCCGCAGGCAAGGATGGTGTCATCAAGCATGTG CTTTCGGGGATCAACCCGCAGGGGTGCGAGGTCTACTCCTTCAAGCATCCCAGCGCCGAAGAACTGGACCACGACTTCCT GTGGCGCAGCGGGCGCCGGCTCCCGGAACGGGGGCGCATCGGGATCTTCAACCGCTCCTATTACGAGGAGGTGCTGATAG TTCGGGTGCACCCGGAGATCCTGGCGGGGGAAGGGCTTCCGGGGCAGTTGGTCAACGGCCATGTATGGCGGGACCGCTTC GAGTCCATCGTGAACCTGGAGGAGCATCTGCACAGAAACGGCACCCGCATCGCCAAGTTCTTCCTGCACATCTCCAAGGA AGAGCAGCGCAAGCGCTTCATCGAGCGGATCGACAACCCGGAGAAGAATTGGAAGTTCGACAAGGCAGACGTGGAAGAGC GAAAGCTCTGGAAGCAGTACATGGAGGCGTACCAGGATTGCCTGGAGGCAACCAGCCGCAAAAACGCCCCGTGGTACATC GTCCCTGCGGACGACAAGAAGAACGCGCGCCTGATCGTCGCCCAGGTACTGCTGAACCTGCTGGAGGAATTGAAGATGGA ATATCCGGATACCTCGGAGGAGCGCCGCAAGGAACTGCAGGAGATACGGAAGGAATTGGCTAAGCCGGAATAG
Upstream 100 bases:
>100_bases CGTTAGTCAAGAACGTGAAACTCACCAGACGAGACCGCTCACGTTGACGCAGCCATAAATTGCGCTAGCCTGAAGCTCTA TGAGTGGAAAGGAGCGAGCT
Downstream 100 bases:
>100_bases CGGAAAGCAGGCATGAAAAAGGCGGCTTGCGCCGCCTGATTCGAAAGCTGCATGGCAACTGTACCTAACGTGTGATGTTC CGGCCCGCGAGTAGAGCCGA
Product: polyphosphate-dependent ADP kinase
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKIDVEQFQVKAKEKVSLKRRPTDVAPFYHSKEQYQECLTEQIERLSALQGLLYANNNYAVLLIFQAMDAAGKDGVIKHV LSGINPQGCEVYSFKHPSAEELDHDFLWRSGRRLPERGRIGIFNRSYYEEVLIVRVHPEILAGEGLPGQLVNGHVWRDRF ESIVNLEEHLHRNGTRIAKFFLHISKEEQRKRFIERIDNPEKNWKFDKADVEERKLWKQYMEAYQDCLEATSRKNAPWYI VPADDKKNARLIVAQVLLNLLEELKMEYPDTSEERRKELQEIRKELAKPE
Sequences:
>Translated_290_residues MKIDVEQFQVKAKEKVSLKRRPTDVAPFYHSKEQYQECLTEQIERLSALQGLLYANNNYAVLLIFQAMDAAGKDGVIKHV LSGINPQGCEVYSFKHPSAEELDHDFLWRSGRRLPERGRIGIFNRSYYEEVLIVRVHPEILAGEGLPGQLVNGHVWRDRF ESIVNLEEHLHRNGTRIAKFFLHISKEEQRKRFIERIDNPEKNWKFDKADVEERKLWKQYMEAYQDCLEATSRKNAPWYI VPADDKKNARLIVAQVLLNLLEELKMEYPDTSEERRKELQEIRKELAKPE >Mature_290_residues MKIDVEQFQVKAKEKVSLKRRPTDVAPFYHSKEQYQECLTEQIERLSALQGLLYANNNYAVLLIFQAMDAAGKDGVIKHV LSGINPQGCEVYSFKHPSAEELDHDFLWRSGRRLPERGRIGIFNRSYYEEVLIVRVHPEILAGEGLPGQLVNGHVWRDRF ESIVNLEEHLHRNGTRIAKFFLHISKEEQRKRFIERIDNPEKNWKFDKADVEERKLWKQYMEAYQDCLEATSRKNAPWYI VPADDKKNARLIVAQVLLNLLEELKMEYPDTSEERRKELQEIRKELAKPE
Specific function: Unknown
COG id: COG2326
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011993 - InterPro: IPR022488 [H]
Pfam domain/function: PF03976 PPK2 [H]
EC number: NA
Molecular weight: Translated: 34176; Mature: 34176
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIDVEQFQVKAKEKVSLKRRPTDVAPFYHSKEQYQECLTEQIERLSALQGLLYANNNYA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEE VLLIFQAMDAAGKDGVIKHVLSGINPQGCEVYSFKHPSAEELDHDFLWRSGRRLPERGRI EEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCE GIFNRSYYEEVLIVRVHPEILAGEGLPGQLVNGHVWRDRFESIVNLEEHLHRNGTRIAKF EEECHHHHHEEEEEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH FLHISKEEQRKRFIERIDNPEKNWKFDKADVEERKLWKQYMEAYQDCLEATSRKNAPWYI HHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VPADDKKNARLIVAQVLLNLLEELKMEYPDTSEERRKELQEIRKELAKPE EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKIDVEQFQVKAKEKVSLKRRPTDVAPFYHSKEQYQECLTEQIERLSALQGLLYANNNYA CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCEE VLLIFQAMDAAGKDGVIKHVLSGINPQGCEVYSFKHPSAEELDHDFLWRSGRRLPERGRI EEEEEEECCCCCCCHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCE GIFNRSYYEEVLIVRVHPEILAGEGLPGQLVNGHVWRDRFESIVNLEEHLHRNGTRIAKF EEECHHHHHEEEEEEECHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHH FLHISKEEQRKRFIERIDNPEKNWKFDKADVEERKLWKQYMEAYQDCLEATSRKNAPWYI HHHHCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEE VPADDKKNARLIVAQVLLNLLEELKMEYPDTSEERRKELQEIRKELAKPE EECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8199775 [H]