Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

Click here to switch to the map view.

The map label for this gene is 197116529

Identifier: 197116529

GI number: 197116529

Start: 155463

End: 155642

Strand: Direct

Name: 197116529

Synonym: Gbem_0129

Alternate gene names: NA

Gene position: 155463-155642 (Clockwise)

Preceding gene: 197116526

Following gene: 197116530

Centisome position: 3.37

GC content: 55.56

Gene sequence:

>180_bases
ATGAGAGTCCAGGATATCCGGGAGATAGCCCAGAGGATGGCGATCCCCACATCAAAACTGAAGAAAGGCGAACTGATCAG
GGTGATACAAAGAACCGAGGGGAATCGGCAGTGTTTCGATTCGGGGCAGTCGGGGCAATGCGGCCAGCGGGAATGCCTGT
GGGCCGATGACTGTAACTAG

Upstream 100 bases:

>100_bases
GCCGACCCAACGAGGAGGAGGCGCTGGAACCGGATTCGGAACACGGCTTAAAGCCGAAAAAACAAAGCCCCCGAGCGGGC
GCAGGAAAGGAGAAAGAGGC

Downstream 100 bases:

>100_bases
GGCGACCGCCGCGGCAAACGCCGCCGGCGGCAGTGATGACGCGAGGCAGATGGAGGAGGCGCCGAGATGGACTTTGACTA
CACGGAGTACGAATACCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MRVQDIREIAQRMAIPTSKLKKGELIRVIQRTEGNRQCFDSGQSGQCGQRECLWADDCN

Sequences:

>Translated_59_residues
MRVQDIREIAQRMAIPTSKLKKGELIRVIQRTEGNRQCFDSGQSGQCGQRECLWADDCN
>Mature_59_residues
MRVQDIREIAQRMAIPTSKLKKGELIRVIQRTEGNRQCFDSGQSGQCGQRECLWADDCN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 6769; Mature: 6769

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVQDIREIAQRMAIPTSKLKKGELIRVIQRTEGNRQCFDSGQSGQCGQRECLWADDCN
CCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRVQDIREIAQRMAIPTSKLKKGELIRVIQRTEGNRQCFDSGQSGQCGQRECLWADDCN
CCHHHHHHHHHHHCCCHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA