| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
Click here to switch to the map view.
The map label for this gene is mhpC [C]
Identifier: 197116486
GI number: 197116486
Start: 105215
End: 106054
Strand: Reverse
Name: mhpC [C]
Synonym: Gbem_0086
Alternate gene names: 197116486
Gene position: 106054-105215 (Counterclockwise)
Preceding gene: 197116489
Following gene: 197116482
Centisome position: 2.3
GC content: 62.98
Gene sequence:
>840_bases ATGAACTACATCACGGTGGGAAAGGAAAACTCCTGCAACATCGATCTCTATTACGAAGACATGGGAGAGGGGCAGCCGGT GGTGCTGATCCACGGCTGGCCGCTCAGCAGCAGGTCGTGGGAGAGGCAGGTCCCCGCGCTGCTGAAGGCCGGTTTCCGGG TCATCGCCTACGACCGGCGCGGGTTCGGCCAGTCGAGCAGGCCCGGCTCCGGCTATGACTACGACACCCTCGCGGACGAC CTGCATGCGCTGATGACCCGGCTCGACCTGAGGAAAGCGGTGCTGGTCGGTTTTTCGATGGGTGGAGGAGAAGTGGCGCA CTACCTGGGGCGGTACGGGACCGAGCGGGTGCAAAAGGCGGTCTTCATGGCCGCGGTGACCCCCTTTTTGCGCAAGGCCG CGGACAATGCGGCGGGGCTCGATGCCGGTATTTTCGAGGAGATCAAGCAGGCCATCAGGGCCGACCGTCCATCCTTTCTG ACCAGCTTCCTGTCCAATTTCTACAACGTGCATGCCTTTGGCGGCAAGAAGGTGAGCGAGGAGCTGCTGCGGCTCTCCTG GAGCATAGCCGCGGCCGCCTCGCCGATAGGGACCCTGGCCTGTGTCGACTCCTGGCTTACCGACTTCAGGGACGACTTGG TGCGGATTCGCATCCCGACCCTGGTGATGCACGGTGACGACGACCGCATCCTTCCCTTTGCCGCGACCGGCAGCAGAACC CATGAGGCCGTCGAGGGGAGCCGGTTGATAGTGGTAGCCGGAGCCCCCCACGGCCTCAACTGGACCCATGCCGAGGAAGT GAACGACGGCCTCATCGACTTCATGCAGGAAGCCATTTAA
Upstream 100 bases:
>100_bases TGCAATTGACTTGGCAGGAAAATGCAGTATTTGAACACTTGCGCCGCGGCTTGCGGCGCGATGACCGCCTGAAAACAGAG GCTAAAAGAGGAGATGCACA
Downstream 100 bases:
>100_bases AAAAAAGGGGACAGGCTACTTTTTCAGATGGAAAAGTAGCCTGTCCCCTTTTAGTCGATGCTTCAGTTTTTCTCAGTGTT TCCGCGTCTTTTCACATTAT
Product: alpha/beta hydrolase superfamily protein
Products: NA
Alternate protein names: Chloride peroxidase [H]
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MNYITVGKENSCNIDLYYEDMGEGQPVVLIHGWPLSSRSWERQVPALLKAGFRVIAYDRRGFGQSSRPGSGYDYDTLADD LHALMTRLDLRKAVLVGFSMGGGEVAHYLGRYGTERVQKAVFMAAVTPFLRKAADNAAGLDAGIFEEIKQAIRADRPSFL TSFLSNFYNVHAFGGKKVSEELLRLSWSIAAAASPIGTLACVDSWLTDFRDDLVRIRIPTLVMHGDDDRILPFAATGSRT HEAVEGSRLIVVAGAPHGLNWTHAEEVNDGLIDFMQEAI
Sequences:
>Translated_279_residues MNYITVGKENSCNIDLYYEDMGEGQPVVLIHGWPLSSRSWERQVPALLKAGFRVIAYDRRGFGQSSRPGSGYDYDTLADD LHALMTRLDLRKAVLVGFSMGGGEVAHYLGRYGTERVQKAVFMAAVTPFLRKAADNAAGLDAGIFEEIKQAIRADRPSFL TSFLSNFYNVHAFGGKKVSEELLRLSWSIAAAASPIGTLACVDSWLTDFRDDLVRIRIPTLVMHGDDDRILPFAATGSRT HEAVEGSRLIVVAGAPHGLNWTHAEEVNDGLIDFMQEAI >Mature_279_residues MNYITVGKENSCNIDLYYEDMGEGQPVVLIHGWPLSSRSWERQVPALLKAGFRVIAYDRRGFGQSSRPGSGYDYDTLADD LHALMTRLDLRKAVLVGFSMGGGEVAHYLGRYGTERVQKAVFMAAVTPFLRKAADNAAGLDAGIFEEIKQAIRADRPSFL TSFLSNFYNVHAFGGKKVSEELLRLSWSIAAAASPIGTLACVDSWLTDFRDDLVRIRIPTLVMHGDDDRILPFAATGSRT HEAVEGSRLIVVAGAPHGLNWTHAEEVNDGLIDFMQEAI
Specific function: 3-hydroxyphenylpropionate degradation. [C]
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial non-heme bromo- and chloro- peroxidases family [H]
Homologues:
Organism=Homo sapiens, GI27597073, Length=142, Percent_Identity=33.8028169014084, Blast_Score=80, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =1.11.1.10 [H]
Molecular weight: Translated: 30725; Mature: 30725
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYITVGKENSCNIDLYYEDMGEGQPVVLIHGWPLSSRSWERQVPALLKAGFRVIAYDRR CCEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC GFGQSSRPGSGYDYDTLADDLHALMTRLDLRKAVLVGFSMGGGEVAHYLGRYGTERVQKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH VFMAAVTPFLRKAADNAAGLDAGIFEEIKQAIRADRPSFLTSFLSNFYNVHAFGGKKVSE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCHHHH ELLRLSWSIAAAASPIGTLACVDSWLTDFRDDLVRIRIPTLVMHGDDDRILPFAATGSRT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEECCCCCH HEAVEGSRLIVVAGAPHGLNWTHAEEVNDGLIDFMQEAI HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MNYITVGKENSCNIDLYYEDMGEGQPVVLIHGWPLSSRSWERQVPALLKAGFRVIAYDRR CCEEECCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEECC GFGQSSRPGSGYDYDTLADDLHALMTRLDLRKAVLVGFSMGGGEVAHYLGRYGTERVQKA CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHH VFMAAVTPFLRKAADNAAGLDAGIFEEIKQAIRADRPSFLTSFLSNFYNVHAFGGKKVSE HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHEEEECCCCHHHH ELLRLSWSIAAAASPIGTLACVDSWLTDFRDDLVRIRIPTLVMHGDDDRILPFAATGSRT HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEEEEEEEEEEECCCCCEEEEECCCCCH HEAVEGSRLIVVAGAPHGLNWTHAEEVNDGLIDFMQEAI HHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]