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The map label for this gene is cooS-2 [H]

Identifier: 197116472

GI number: 197116472

Start: 86223

End: 88130

Strand: Direct

Name: cooS-2 [H]

Synonym: Gbem_0072

Alternate gene names: 197116472

Gene position: 86223-88130 (Clockwise)

Preceding gene: 197116471

Following gene: 197116474

Centisome position: 1.87

GC content: 65.93

Gene sequence:

>1908_bases
ATGACCCTCAATCTCACCACCGATCCGTCCGCGGCAACGCTGTTGCCGATCGCCAAGAAAGAAGGGATCTCCACGGTATG
GGACCGCCACCGCGCCATGCAGCCGCAGTGCGGCTTCGGCCAACTGGGCGTCTGCTGCCGCATCTGCTGGAAGGGGCCCT
GCCGCATCGACCCGTTCGGTGACGGCCCGCAGCGCGGCATCTGCGGCGCGGATGCCGACACCATCGTGGCCCGTAACCTG
ATCCGCATGATCGCCGCCGGCGCGGCCGGGCATTCCGAGCACGGCAGGCACGTGGCGCTGGCACTGCAGGGGGTGTCGCA
AGGGAAGCTACCGGCCTACCAGATCCGGGACGAGGCAAAGCTTTTGCGCGTTGCCGCGAAGCTCAAGATCTGCACCGAGG
GTCAGGAGATCCAGGCCGTCGCCGCGGCGGTGGCCAAGGCAACCCTGGAGGACTTCCAGAGCCAGGACCACGATGCCCCC
TGCAACTGGATCGAGGCGACGCTTACCAAGGAGCGCCTGGAGCGTCTGCAGGCCCTGCACGTGGTGCCGCACAACATCGA
TGCCGTGATCACCCAGATCATGGGACGCACCCTGGTCGGCTGCGACGCGGACCCGGTCAACCTGATCCTGGGGGGAATCA
AAGGGGCGCTGGCGGATTTCAACGGCATGTGCCTCGCCACCGAGATCTCCGATGCCCTCTTCGGCGCCCCCGCTCCGGTG
GTGACCGCCGCCAATTTGGGCGTCATCAAGCCCGACGCGGTCAACATCGCGGTGCACGGCCACAACCCGCTCCTAAGCGA
GGTGGTCTGCGAGGTGGCACAGCAGATGGACGAAGAAGCGAGGAAGGCGGGCGCGAAGGAGGGGATCAACATCGTCGGCA
TCTGCTGCACCGGCAACGAAGTGATGGTGCGCCACGGCATACCGCTCGCCGCCAACTACCTCTCGCAGGAACTGGCGCTG
GTGACCGGCGCGGTCGACGCGATGGTGGTCGACGTGCAGTGCATCATGCCTTCGGTGGCGGAGATCGGCGCCTGCTTCCA
CACCGCCGTCATCACCACCATGGAGGAGAACAAGATCAAAGGCGCGAGCCACGTCTCCTTCAAGGAGGAGACCGCCCTGG
AGAACGCGCGCCAGATCGTGGAGACGGCCATCGAGGCGTACAAGCGGCGCGACCCGCGCAGGGTCAACATACCGGACTTC
AAGCAGACCGCCATCGTCGGCTTCGGCCTGGAGTCGGTAGTGGCAGCACTTGCCACCCTCAACGCCGAAGACCCGCTACA
GCCGCTCATCGACAACATCGCCAACGGCAACATCCGCGGCATAGCGCTCTTCGCCGGATGCAACTCAACCCAGGTGGCCC
AGGACAGCAGCTTCGTCACCATGGCCAAAAAGCTGGCTAAAAACAACGTCCTGCTCTTAGCCACCGGATGCGGCGCGGGT
TCCTTCGCCAAGCACGGGTTGATGACCCAGGAGGCGACGGTCGAGTACGCCGGCGACTCGCTGAAGGCGGTGCTCACGGC
TATCGGGACCTCGGCCGGGCTGAACGGCCCCCTGCCGCTGGTGCTGCACATGGGCTCGTGCGTGGACAACAGCCGTGCGG
TGGAGGTGGCGGTCGCGGTCGCCAACCGGCTCGGGGTCGACCTGGACAAGCTCCCGCTGGTGGCCTCAGCACCCGAGGCG
ATGTCCGAGAAGGCCGTGGCCATCGGGACCTGGAGCGTCGCGCTCGGCATCCCGACCCACTTGGGGACCATGCCGCAGGT
GACGGGATCGGCCCAGGTGACCGAACTCCTGACGCAGACGGCCAAGGATCTTCTGGGTGGATATTTCCTGGTGGAACTCG
ACCCCGAGCTGGCGGCGGAGAAGCTTCTCGAAGTCATAGACGAGCGCAGGAAAGGGCTGGGGATCTGA

Upstream 100 bases:

>100_bases
CCCTGGTCGACCTGGAAGAGTACCGACAGAGCCTCATCGAAGCCAGGGCCGCCGAACTCGCCCAATCCCTACAATTTCTC
AAGAAAAGGAAGGCCAAACT

Downstream 100 bases:

>100_bases
ACATGTGCGAACACCACAACCACGAACATAGTCACGGGACGGATCATGAGCACGAGCATCGGCACCACGATCATCATCAC
CATGAGAATCTGCATCACGG

Product: carbon monoxide dehydrogenase catalytic subunit

Products: NA

Alternate protein names: CODH 1 [H]

Number of amino acids: Translated: 635; Mature: 634

Protein sequence:

>635_residues
MTLNLTTDPSAATLLPIAKKEGISTVWDRHRAMQPQCGFGQLGVCCRICWKGPCRIDPFGDGPQRGICGADADTIVARNL
IRMIAAGAAGHSEHGRHVALALQGVSQGKLPAYQIRDEAKLLRVAAKLKICTEGQEIQAVAAAVAKATLEDFQSQDHDAP
CNWIEATLTKERLERLQALHVVPHNIDAVITQIMGRTLVGCDADPVNLILGGIKGALADFNGMCLATEISDALFGAPAPV
VTAANLGVIKPDAVNIAVHGHNPLLSEVVCEVAQQMDEEARKAGAKEGINIVGICCTGNEVMVRHGIPLAANYLSQELAL
VTGAVDAMVVDVQCIMPSVAEIGACFHTAVITTMEENKIKGASHVSFKEETALENARQIVETAIEAYKRRDPRRVNIPDF
KQTAIVGFGLESVVAALATLNAEDPLQPLIDNIANGNIRGIALFAGCNSTQVAQDSSFVTMAKKLAKNNVLLLATGCGAG
SFAKHGLMTQEATVEYAGDSLKAVLTAIGTSAGLNGPLPLVLHMGSCVDNSRAVEVAVAVANRLGVDLDKLPLVASAPEA
MSEKAVAIGTWSVALGIPTHLGTMPQVTGSAQVTELLTQTAKDLLGGYFLVELDPELAAEKLLEVIDERRKGLGI

Sequences:

>Translated_635_residues
MTLNLTTDPSAATLLPIAKKEGISTVWDRHRAMQPQCGFGQLGVCCRICWKGPCRIDPFGDGPQRGICGADADTIVARNL
IRMIAAGAAGHSEHGRHVALALQGVSQGKLPAYQIRDEAKLLRVAAKLKICTEGQEIQAVAAAVAKATLEDFQSQDHDAP
CNWIEATLTKERLERLQALHVVPHNIDAVITQIMGRTLVGCDADPVNLILGGIKGALADFNGMCLATEISDALFGAPAPV
VTAANLGVIKPDAVNIAVHGHNPLLSEVVCEVAQQMDEEARKAGAKEGINIVGICCTGNEVMVRHGIPLAANYLSQELAL
VTGAVDAMVVDVQCIMPSVAEIGACFHTAVITTMEENKIKGASHVSFKEETALENARQIVETAIEAYKRRDPRRVNIPDF
KQTAIVGFGLESVVAALATLNAEDPLQPLIDNIANGNIRGIALFAGCNSTQVAQDSSFVTMAKKLAKNNVLLLATGCGAG
SFAKHGLMTQEATVEYAGDSLKAVLTAIGTSAGLNGPLPLVLHMGSCVDNSRAVEVAVAVANRLGVDLDKLPLVASAPEA
MSEKAVAIGTWSVALGIPTHLGTMPQVTGSAQVTELLTQTAKDLLGGYFLVELDPELAAEKLLEVIDERRKGLGI
>Mature_634_residues
TLNLTTDPSAATLLPIAKKEGISTVWDRHRAMQPQCGFGQLGVCCRICWKGPCRIDPFGDGPQRGICGADADTIVARNLI
RMIAAGAAGHSEHGRHVALALQGVSQGKLPAYQIRDEAKLLRVAAKLKICTEGQEIQAVAAAVAKATLEDFQSQDHDAPC
NWIEATLTKERLERLQALHVVPHNIDAVITQIMGRTLVGCDADPVNLILGGIKGALADFNGMCLATEISDALFGAPAPVV
TAANLGVIKPDAVNIAVHGHNPLLSEVVCEVAQQMDEEARKAGAKEGINIVGICCTGNEVMVRHGIPLAANYLSQELALV
TGAVDAMVVDVQCIMPSVAEIGACFHTAVITTMEENKIKGASHVSFKEETALENARQIVETAIEAYKRRDPRRVNIPDFK
QTAIVGFGLESVVAALATLNAEDPLQPLIDNIANGNIRGIALFAGCNSTQVAQDSSFVTMAKKLAKNNVLLLATGCGAGS
FAKHGLMTQEATVEYAGDSLKAVLTAIGTSAGLNGPLPLVLHMGSCVDNSRAVEVAVAVANRLGVDLDKLPLVASAPEAM
SEKAVAIGTWSVALGIPTHLGTMPQVTGSAQVTELLTQTAKDLLGGYFLVELDPELAAEKLLEVIDERRKGLGI

Specific function: CODH oxidizes carbon monoxide coupled, via CooF, to the reduction of a hydrogen cation by a hydrogenase (possibly CooH) [H]

COG id: COG1151

COG function: function code C; 6Fe-6S prismane cluster-containing protein

Gene ontology:

Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein; Cytoplasmic side. Note=Loosely attached to the membrane, probably via CooF [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Ni-containing carbon monoxide dehydrogenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016101
- InterPro:   IPR010047
- InterPro:   IPR004137
- InterPro:   IPR011254
- InterPro:   IPR016099 [H]

Pfam domain/function: PF03063 Prismane [H]

EC number: =1.2.99.2 [H]

Molecular weight: Translated: 66805; Mature: 66674

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNLTTDPSAATLLPIAKKEGISTVWDRHRAMQPQCGFGQLGVCCRICWKGPCRIDPFG
CEEEECCCCCCCEEEECHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DGPQRGICGADADTIVARNLIRMIAAGAAGHSEHGRHVALALQGVSQGKLPAYQIRDEAK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
LLRVAAKLKICTEGQEIQAVAAAVAKATLEDFQSQDHDAPCNWIEATLTKERLERLQALH
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VVPHNIDAVITQIMGRTLVGCDADPVNLILGGIKGALADFNGMCLATEISDALFGAPAPV
CCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCC
VTAANLGVIKPDAVNIAVHGHNPLLSEVVCEVAQQMDEEARKAGAKEGINIVGICCTGNE
EEECCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEECCCE
VMVRHGIPLAANYLSQELALVTGAVDAMVVDVQCIMPSVAEIGACFHTAVITTMEENKIK
EEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEEHHHCCCC
GASHVSFKEETALENARQIVETAIEAYKRRDPRRVNIPDFKQTAIVGFGLESVVAALATL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCHHHHHHHHHHC
NAEDPLQPLIDNIANGNIRGIALFAGCNSTQVAQDSSFVTMAKKLAKNNVLLLATGCGAG
CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
SFAKHGLMTQEATVEYAGDSLKAVLTAIGTSAGLNGPLPLVLHMGSCVDNSRAVEVAVAV
HHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHH
ANRLGVDLDKLPLVASAPEAMSEKAVAIGTWSVALGIPTHLGTMPQVTGSAQVTELLTQT
HHHHCCCHHHCCCEECCCHHHCCCEEEEEEEEEEECCCHHCCCCCCCCCCHHHHHHHHHH
AKDLLGGYFLVELDPELAAEKLLEVIDERRKGLGI
HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TLNLTTDPSAATLLPIAKKEGISTVWDRHRAMQPQCGFGQLGVCCRICWKGPCRIDPFG
EEEECCCCCCCEEEECHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCC
DGPQRGICGADADTIVARNLIRMIAAGAAGHSEHGRHVALALQGVSQGKLPAYQIRDEAK
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHH
LLRVAAKLKICTEGQEIQAVAAAVAKATLEDFQSQDHDAPCNWIEATLTKERLERLQALH
HHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
VVPHNIDAVITQIMGRTLVGCDADPVNLILGGIKGALADFNGMCLATEISDALFGAPAPV
CCCCCHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCCCCC
VTAANLGVIKPDAVNIAVHGHNPLLSEVVCEVAQQMDEEARKAGAKEGINIVGICCTGNE
EEECCCCEECCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHCCHHCCCEEEEEEECCCE
VMVRHGIPLAANYLSQELALVTGAVDAMVVDVQCIMPSVAEIGACFHTAVITTMEENKIK
EEEECCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHEEHHHCCCC
GASHVSFKEETALENARQIVETAIEAYKRRDPRRVNIPDFKQTAIVGFGLESVVAALATL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHEEECCHHHHHHHHHHC
NAEDPLQPLIDNIANGNIRGIALFAGCNSTQVAQDSSFVTMAKKLAKNNVLLLATGCGAG
CCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCC
SFAKHGLMTQEATVEYAGDSLKAVLTAIGTSAGLNGPLPLVLHMGSCVDNSRAVEVAVAV
HHHHCCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHH
ANRLGVDLDKLPLVASAPEAMSEKAVAIGTWSVALGIPTHLGTMPQVTGSAQVTELLTQT
HHHHCCCHHHCCCEECCCHHHCCCEEEEEEEEEEECCCHHCCCCCCCCCCHHHHHHHHHH
AKDLLGGYFLVELDPELAAEKLLEVIDERRKGLGI
HHHHHCCEEEEEECHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11489867 [H]