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The map label for this gene is cooC [H]

Identifier: 197116474

GI number: 197116474

Start: 88292

End: 89068

Strand: Direct

Name: cooC [H]

Synonym: Gbem_0074

Alternate gene names: 197116474

Gene position: 88292-89068 (Clockwise)

Preceding gene: 197116472

Following gene: 197116475

Centisome position: 1.91

GC content: 68.47

Gene sequence:

>777_bases
TTGAGGATAGCGGTCACCGGCAAGGGGGGCGTCGGCAAGACCACCTTCGCGAGCCTTTTGGCACGCGCCTTCGCCGACGA
CGGAGCGAGGGTGCTTGCCGTGGACGCCGACCCGGACGCGAACCTGGCCCAGGCGCTCGGCATATCGTCCGAGGCGGCCA
GGGCGCTGCAACCGGTCGCCAGGATGAAGGAACTGGCGGAGGAGCGCACGGGCGCCTCCGGGGGGTACGGCTCCTTCTTC
AAACTGAACCCCAAGGTGAGCGACCTCCCCGAGCGCTTCTGCCTCACCCACGACGGGGTCCGCTTCCTCTGGATGGGGAC
CTTCGAGCAGGGGGGGAGCGGCTGCGCCTGCCCCGAAAGCACGCTGGTCAAGCGCCTGATGGGGCACCTTCTCCTGGAGC
GGGACGAGGTGGTGATCATGGACATGGAGGCGGGGCTGGAGCACCTGGGGCGCAGGACGGCCGAGTCGGTCGACGCCCTG
GTGGTCGTGGTCGAGCCGGGGCAAAGGAGCATCCAGACCGCGGAGCAGATCATGAAGCTCGCCGCCGACCTGGGAATAGA
AGAGGTCTACGTGGTGGGGAGCAAGGTGCGCGACGAGGAAGACCGTCTGCTGATAAGCGGTGCGATCCCGGCGCGGCAGT
TGTTGGGGACCGTCTCCTTTTGCGACGGCATCAGGCGTGCGGACCGGGAGAACCAGGCTCCGGCCCGCCTGAGCGCCGGC
GCGCTGGAGGAAGTCGGTGCAATCAAGGAGCGCCTGCTGGCGCTGCACGCGGCGTAA

Upstream 100 bases:

>100_bases
GCACCACGATCATCATCACCATGAGAATCTGCATCACGGCCACCCCCACCACGCCACCCCCCAGGGGGGCGACGCTGCAC
CTCTCGAAGCCCGGCGAGGC

Downstream 100 bases:

>100_bases
AATCGTTCACCACAGAGGAGCACAGAGGGACACAGAGGAAAATCTAAAATCCTTGAAAGGTGTAAAGCCTTAGTATTTTC
CTTTGTGACCTCCGTGCCCT

Product: carbon monoxide dehydrogenase accessory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRIAVTGKGGVGKTTFASLLARAFADDGARVLAVDADPDANLAQALGISSEAARALQPVARMKELAEERTGASGGYGSFF
KLNPKVSDLPERFCLTHDGVRFLWMGTFEQGGSGCACPESTLVKRLMGHLLLERDEVVIMDMEAGLEHLGRRTAESVDAL
VVVVEPGQRSIQTAEQIMKLAADLGIEEVYVVGSKVRDEEDRLLISGAIPARQLLGTVSFCDGIRRADRENQAPARLSAG
ALEEVGAIKERLLALHAA

Sequences:

>Translated_258_residues
MRIAVTGKGGVGKTTFASLLARAFADDGARVLAVDADPDANLAQALGISSEAARALQPVARMKELAEERTGASGGYGSFF
KLNPKVSDLPERFCLTHDGVRFLWMGTFEQGGSGCACPESTLVKRLMGHLLLERDEVVIMDMEAGLEHLGRRTAESVDAL
VVVVEPGQRSIQTAEQIMKLAADLGIEEVYVVGSKVRDEEDRLLISGAIPARQLLGTVSFCDGIRRADRENQAPARLSAG
ALEEVGAIKERLLALHAA
>Mature_258_residues
MRIAVTGKGGVGKTTFASLLARAFADDGARVLAVDADPDANLAQALGISSEAARALQPVARMKELAEERTGASGGYGSFF
KLNPKVSDLPERFCLTHDGVRFLWMGTFEQGGSGCACPESTLVKRLMGHLLLERDEVVIMDMEAGLEHLGRRTAESVDAL
VVVVEPGQRSIQTAEQIMKLAADLGIEEVYVVGSKVRDEEDRLLISGAIPARQLLGTVSFCDGIRRADRENQAPARLSAG
ALEEVGAIKERLLALHAA

Specific function: Involved in the insertion of nickel into the carbon monoxide dehydrogenase (CODH) [H]

COG id: COG3640

COG function: function code D; CO dehydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR014433 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27542; Mature: 27542

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIAVTGKGGVGKTTFASLLARAFADDGARVLAVDADPDANLAQALGISSEAARALQPVA
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHH
RMKELAEERTGASGGYGSFFKLNPKVSDLPERFCLTHDGVRFLWMGTFEQGGSGCACPES
HHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH
TLVKRLMGHLLLERDEVVIMDMEAGLEHLGRRTAESVDALVVVVEPGQRSIQTAEQIMKL
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH
AADLGIEEVYVVGSKVRDEEDRLLISGAIPARQLLGTVSFCDGIRRADRENQAPARLSAG
HHHCCHHHEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALEEVGAIKERLLALHAA
HHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRIAVTGKGGVGKTTFASLLARAFADDGARVLAVDADPDANLAQALGISSEAARALQPVA
CEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHH
RMKELAEERTGASGGYGSFFKLNPKVSDLPERFCLTHDGVRFLWMGTFEQGGSGCACPES
HHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHH
TLVKRLMGHLLLERDEVVIMDMEAGLEHLGRRTAESVDALVVVVEPGQRSIQTAEQIMKL
HHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHH
AADLGIEEVYVVGSKVRDEEDRLLISGAIPARQLLGTVSFCDGIRRADRENQAPARLSAG
HHHCCHHHEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHH
ALEEVGAIKERLLALHAA
HHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9079911; 1644755 [H]