| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is crp [C]
Identifier: 197116466
GI number: 197116466
Start: 81597
End: 82259
Strand: Direct
Name: crp [C]
Synonym: Gbem_0066
Alternate gene names: 197116466
Gene position: 81597-82259 (Clockwise)
Preceding gene: 197116457
Following gene: 197116467
Centisome position: 1.77
GC content: 61.54
Gene sequence:
>663_bases ATGCCGAACAAGATGAAGCTCACTGCCGCGGACCTCTTATCGCTTTTTAACCCCGCTGACTCCGATCAGTTCCTCGCCCA TTTCACCACCCGCCACTACCCCCCGAAGGCACTGGTCTATTCTCCGTTCGAGGAGAAGAACCTGGTGTTCGTGGTGAAAA GCGGCCGGCTTCGGGTCTACCTCGCTTACGAGGACAAGGAGTTCACCCTGGCGCTCCTGGAGCCGGGGGATGTCTTCAGT ACCCATACGCCCGCTTTCGTGCAGGCGCTGGAAGGAAGCGAGATCCTCGTCTGCAGTACGGCAACGTTCCGGGAGGCGGT GGCGCGGCGGCCGGAACTCTCGCTCACTATGGTAAAGGTGCTGGGAGAGCTCCTGAAGAACTCGATAGAGACCATCGAGG GGCTCGCCTTCAAGGACGTCCGCCTGCGCCTGGTGGATTTCCTGCTGGGTGCCGCCGCCGAGCGCGGCCGGGCGAGCACC GAAGGGACGGTGGTGCAACTGGGCCTCGGCACCGAGGACATCGCCCTGCTCATCGGCACCACGCGCCAGACCATCTCCCA GATCGTCAACGACTTCATAAAGGCCGACCTGCTGCGTAAGATCGACCGCAAGACCCTCCTTATCACCGACATGGACGCAC TCAAGGCGCTTAGGGAACTGTAA
Upstream 100 bases:
>100_bases AGTGGAGATGAAACAGACGCGACCGCGTTTCTCATCTTGCAGGGAGCAGCGGCGTTGCCTATGATGCAATCAATGATCGC TTGATGAAAGGTGCAACCCG
Downstream 100 bases:
>100_bases ATCCTCATCGCTCCCCAGGCAGTTTCGGTTAGGCATTTGCACTATCTTCATCGAGCAGTTTCCAGCTCCCCCTCCCTTGA CGGGAGGGGGCAGGGGGGTG
Product: cyclic nucleotide-binding transcriptional activator
Products: NA
Alternate protein names: Crp/FNR Family Transcriptional Regulator; Crp/Fnr Family Transcriptional Regulator; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Crp-Family Transcriptional Regulator; Crp Family Transcriptional Regulator; Carbon Monoxide Dehydrogenase CooA Protein; Transcriptional Regulator MrpC
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MPNKMKLTAADLLSLFNPADSDQFLAHFTTRHYPPKALVYSPFEEKNLVFVVKSGRLRVYLAYEDKEFTLALLEPGDVFS THTPAFVQALEGSEILVCSTATFREAVARRPELSLTMVKVLGELLKNSIETIEGLAFKDVRLRLVDFLLGAAAERGRAST EGTVVQLGLGTEDIALLIGTTRQTISQIVNDFIKADLLRKIDRKTLLITDMDALKALREL
Sequences:
>Translated_220_residues MPNKMKLTAADLLSLFNPADSDQFLAHFTTRHYPPKALVYSPFEEKNLVFVVKSGRLRVYLAYEDKEFTLALLEPGDVFS THTPAFVQALEGSEILVCSTATFREAVARRPELSLTMVKVLGELLKNSIETIEGLAFKDVRLRLVDFLLGAAAERGRAST EGTVVQLGLGTEDIALLIGTTRQTISQIVNDFIKADLLRKIDRKTLLITDMDALKALREL >Mature_219_residues PNKMKLTAADLLSLFNPADSDQFLAHFTTRHYPPKALVYSPFEEKNLVFVVKSGRLRVYLAYEDKEFTLALLEPGDVFST HTPAFVQALEGSEILVCSTATFREAVARRPELSLTMVKVLGELLKNSIETIEGLAFKDVRLRLVDFLLGAAAERGRASTE GTVVQLGLGTEDIALLIGTTRQTISQIVNDFIKADLLRKIDRKTLLITDMDALKALREL
Specific function: This Protein Complexes With Cyclic AMP And Binds To Specific DNA Sites Near The Promoter To Regulate The Transcription Of Several Catabolite-Sensitive Operons. The Protein Induces A Severe Bend In The DNA. Acts As A Negative Regulator Of Its Own Synthesi
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24456; Mature: 24325
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50042 CNMP_BINDING_3 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNKMKLTAADLLSLFNPADSDQFLAHFTTRHYPPKALVYSPFEEKNLVFVVKSGRLRVY CCCCEEECHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCEEEE LAYEDKEFTLALLEPGDVFSTHTPAFVQALEGSEILVCSTATFREAVARRPELSLTMVKV EEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHH LGELLKNSIETIEGLAFKDVRLRLVDFLLGAAAERGRASTEGTVVQLGLGTEDIALLIGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEC TRQTISQIVNDFIKADLLRKIDRKTLLITDMDALKALREL CHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCC >Mature Secondary Structure PNKMKLTAADLLSLFNPADSDQFLAHFTTRHYPPKALVYSPFEEKNLVFVVKSGRLRVY CCCEEECHHHHHHHCCCCCCHHHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCEEEE LAYEDKEFTLALLEPGDVFSTHTPAFVQALEGSEILVCSTATFREAVARRPELSLTMVKV EEEECCCEEEEEECCCCCCCCCCHHHHHHCCCCEEEEECCHHHHHHHHCCCCCHHHHHHH LGELLKNSIETIEGLAFKDVRLRLVDFLLGAAAERGRASTEGTVVQLGLGTEDIALLIGT HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCEEEEEEC TRQTISQIVNDFIKADLLRKIDRKTLLITDMDALKALREL CHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA