Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116462

Identifier: 197116462

GI number: 197116462

Start: 73976

End: 74794

Strand: Reverse

Name: 197116462

Synonym: Gbem_0062

Alternate gene names: NA

Gene position: 74794-73976 (Counterclockwise)

Preceding gene: 197116463

Following gene: 197116461

Centisome position: 1.62

GC content: 41.27

Gene sequence:

>819_bases
ATGAAAAAGATGTTTGCGTTAGTGGTTTGCCTTGCTGTGATTTTTCCAAATATTGTTATGGCAGCCTCAATCGAAAAGGC
GGAAATGTACAGACAGAACGGGCTCACAGCAGAAGCGAAAAGGGAACTTATTGACATCATTTATACGAAAGAGGATAGGG
CTAAGCCCGAAGCCTACTATCTGCTTGGAACTATAGCTTTCGGTGAAAGGAACATCTCATCTGCTCTGGACTTATGGAAA
AAACTAATTGAAAAATATCCGAAATCATCACAAGCAGCACTTGTCAAGGACAGGGTAAAACAATTAGCAGAAATCACAGG
AGAAGTTACGAAGGTAACGATAGAAAATGCTGTTGCACAATCATATTTACGGCACGCTGATTTCTGGTCTGAAAGGAAAA
AGGAAATATTTGTTATCGATTCAAGTTGGATCCCACAGGTTGAAGCAGCAATAAAATGGTATGACAAGGTTATTCTGGAG
TTCCCGAAATCCGAAGCGGCTAAGATTGCCTACGAAGGCAAACTAAAAACAATTATCGGCTGGGAAGAAACAGGTCGTTA
TGGAGAGCAACATGGTTTAAAGGGAAACTTTTACAAATATATGCCAATGATGTTGTCAACATTCGCGGCCTTTGAGTCAG
ATCACCCGGATGCGTCTACTCTACAATCATTTAGATATCAGATCGCCCAAGCCTACTGGAGCAATAGAGACTGGGAGAAG
ACTAGAGAATGGTTGAAGCTAATGATGGAAAAATCGGGGCCAAATGACAGTTTTTATAAAGACTTAGCTTCCCGGCGGCT
AGAGAAAGTGGAATATTAG

Upstream 100 bases:

>100_bases
TCCTGTATAAGGAACTGAGGTAAGGTAGGTATACAGGCAACAAATTACCTGTATAGGGAACCGGCAACTTATATAGCATC
ATCAAAAAAGGAGGAAAGAC

Downstream 100 bases:

>100_bases
TTCGAGTTTCGCCCCCTAGCATCTTGTTCAACCATCGGCACGACCCCTCTCCCGCCCGCCGGTCGGGGGGTAGCCTCACT
CCCGTTAAAGATGAAGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MKKMFALVVCLAVIFPNIVMAASIEKAEMYRQNGLTAEAKRELIDIIYTKEDRAKPEAYYLLGTIAFGERNISSALDLWK
KLIEKYPKSSQAALVKDRVKQLAEITGEVTKVTIENAVAQSYLRHADFWSERKKEIFVIDSSWIPQVEAAIKWYDKVILE
FPKSEAAKIAYEGKLKTIIGWEETGRYGEQHGLKGNFYKYMPMMLSTFAAFESDHPDASTLQSFRYQIAQAYWSNRDWEK
TREWLKLMMEKSGPNDSFYKDLASRRLEKVEY

Sequences:

>Translated_272_residues
MKKMFALVVCLAVIFPNIVMAASIEKAEMYRQNGLTAEAKRELIDIIYTKEDRAKPEAYYLLGTIAFGERNISSALDLWK
KLIEKYPKSSQAALVKDRVKQLAEITGEVTKVTIENAVAQSYLRHADFWSERKKEIFVIDSSWIPQVEAAIKWYDKVILE
FPKSEAAKIAYEGKLKTIIGWEETGRYGEQHGLKGNFYKYMPMMLSTFAAFESDHPDASTLQSFRYQIAQAYWSNRDWEK
TREWLKLMMEKSGPNDSFYKDLASRRLEKVEY
>Mature_272_residues
MKKMFALVVCLAVIFPNIVMAASIEKAEMYRQNGLTAEAKRELIDIIYTKEDRAKPEAYYLLGTIAFGERNISSALDLWK
KLIEKYPKSSQAALVKDRVKQLAEITGEVTKVTIENAVAQSYLRHADFWSERKKEIFVIDSSWIPQVEAAIKWYDKVILE
FPKSEAAKIAYEGKLKTIIGWEETGRYGEQHGLKGNFYKYMPMMLSTFAAFESDHPDASTLQSFRYQIAQAYWSNRDWEK
TREWLKLMMEKSGPNDSFYKDLASRRLEKVEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31582; Mature: 31582

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKMFALVVCLAVIFPNIVMAASIEKAEMYRQNGLTAEAKRELIDIIYTKEDRAKPEAYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEE
LLGTIAFGERNISSALDLWKKLIEKYPKSSQAALVKDRVKQLAEITGEVTKVTIENAVAQ
EEEEHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLRHADFWSERKKEIFVIDSSWIPQVEAAIKWYDKVILEFPKSEAAKIAYEGKLKTIIG
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCEEEEEC
WEETGRYGEQHGLKGNFYKYMPMMLSTFAAFESDHPDASTLQSFRYQIAQAYWSNRDWEK
CHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
TREWLKLMMEKSGPNDSFYKDLASRRLEKVEY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKMFALVVCLAVIFPNIVMAASIEKAEMYRQNGLTAEAKRELIDIIYTKEDRAKPEAYY
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCEE
LLGTIAFGERNISSALDLWKKLIEKYPKSSQAALVKDRVKQLAEITGEVTKVTIENAVAQ
EEEEHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SYLRHADFWSERKKEIFVIDSSWIPQVEAAIKWYDKVILEFPKSEAAKIAYEGKLKTIIG
HHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHEEECCCEEEEEC
WEETGRYGEQHGLKGNFYKYMPMMLSTFAAFESDHPDASTLQSFRYQIAQAYWSNRDWEK
CHHHCCCCHHCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCHHH
TREWLKLMMEKSGPNDSFYKDLASRRLEKVEY
HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA