| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116461
Identifier: 197116461
GI number: 197116461
Start: 73065
End: 73868
Strand: Reverse
Name: 197116461
Synonym: Gbem_0061
Alternate gene names: NA
Gene position: 73868-73065 (Counterclockwise)
Preceding gene: 197116462
Following gene: 197116460
Centisome position: 1.6
GC content: 42.91
Gene sequence:
>804_bases ATGCATGTAGTAAATCTCGCGACGTGGGAAGAATTCGAAGGAAATGTGTTCGCTCTGTACCAACTTTTACACCCGAAGGT CCCTGAAAATAAAAGCTATGTTTCACCTTTGTTATTCAGAGGACATTCAAATGCATCATGGTTGCTAGAAACAACCCTAG AAAGAGTCGCGGGAAAGTGTTTTAGGGCCGACGAGTATTACAATATAATGCTTTCGGTACAACCGGCGATTCAGTCTTTT ACTGAAAAAACATGGGAATTCGCTCATTCATATCCAAATGATGATGGCACCCCTAAACCTCCGCCTGGATATGAGTTCAT GGCATATCTGCGACACCATGGTTTTCCATCGCCACTCCTAGACTGGTCACGTTCTCCATACATTGCCGCATTCTTTGCTT TCCAATCGCCAGAACTGCATTCACATGATGACAATGTCGCTATTTATGTTTTTGTAGAATATCTAGCTGCTGGAAAGAGC GGAATGTTGAGCGAAGCAACTATTATAGGTTGCGGACCGCATGTAACCACACATAAAAGACATTTCAATCAACAGAGTGA ATATACAATTTGCAGGAAAATCAAGGAAGACAGAGTCTTCTACTGCTGCCATGAAGAAGCTTTTGCAAGAGATGAAGGGA GCCAAGATCTGCTCTTTAAGTACATCCTACCAAGGAGCGAAAGAGGTAAGGTTTTGGAGAGGCTACATATGATGAACATA ACAGCCTACTCTCTCTATGGAAGTGAAGACAGTCTTATTTCTACTCTTGCATACCAGGAAATCAACCGCAAGCGCCGCAT CTGA
Upstream 100 bases:
>100_bases TTCGCCCCCTAGCATCTTGTTCAACCATCGGCACGACCCCTCTCCCGCCCGCCGGTCGGGGGGTAGCCTCACTCCCGTTA AAGATGAAGGAAAAGATAAC
Downstream 100 bases:
>100_bases ATTCGACCACCAGGGAGAGAGTGGGCACAGGGGTTGGTGGGCACAGGGGTCGCGTCTGTAAAATTGACAGAGTCATTGAA GCGATCGAGCCTGGGAGTCT
Product: FRG domain-containing protein
Products: NA
Alternate protein names: FRG Domain-Containing Protein
Number of amino acids: Translated: 267; Mature: 267
Protein sequence:
>267_residues MHVVNLATWEEFEGNVFALYQLLHPKVPENKSYVSPLLFRGHSNASWLLETTLERVAGKCFRADEYYNIMLSVQPAIQSF TEKTWEFAHSYPNDDGTPKPPPGYEFMAYLRHHGFPSPLLDWSRSPYIAAFFAFQSPELHSHDDNVAIYVFVEYLAAGKS GMLSEATIIGCGPHVTTHKRHFNQQSEYTICRKIKEDRVFYCCHEEAFARDEGSQDLLFKYILPRSERGKVLERLHMMNI TAYSLYGSEDSLISTLAYQEINRKRRI
Sequences:
>Translated_267_residues MHVVNLATWEEFEGNVFALYQLLHPKVPENKSYVSPLLFRGHSNASWLLETTLERVAGKCFRADEYYNIMLSVQPAIQSF TEKTWEFAHSYPNDDGTPKPPPGYEFMAYLRHHGFPSPLLDWSRSPYIAAFFAFQSPELHSHDDNVAIYVFVEYLAAGKS GMLSEATIIGCGPHVTTHKRHFNQQSEYTICRKIKEDRVFYCCHEEAFARDEGSQDLLFKYILPRSERGKVLERLHMMNI TAYSLYGSEDSLISTLAYQEINRKRRI >Mature_267_residues MHVVNLATWEEFEGNVFALYQLLHPKVPENKSYVSPLLFRGHSNASWLLETTLERVAGKCFRADEYYNIMLSVQPAIQSF TEKTWEFAHSYPNDDGTPKPPPGYEFMAYLRHHGFPSPLLDWSRSPYIAAFFAFQSPELHSHDDNVAIYVFVEYLAAGKS GMLSEATIIGCGPHVTTHKRHFNQQSEYTICRKIKEDRVFYCCHEEAFARDEGSQDLLFKYILPRSERGKVLERLHMMNI TAYSLYGSEDSLISTLAYQEINRKRRI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30919; Mature: 30919
Theoretical pI: Translated: 6.70; Mature: 6.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVVNLATWEEFEGNVFALYQLLHPKVPENKSYVSPLLFRGHSNASWLLETTLERVAGKC CEEEEECCHHHHCCCHHEEHHHHCCCCCCCCCHHCHHHEECCCCCHHHHHHHHHHHHHHH FRADEYYNIMLSVQPAIQSFTEKTWEFAHSYPNDDGTPKPPPGYEFMAYLRHHGFPSPLL CCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH DWSRSPYIAAFFAFQSPELHSHDDNVAIYVFVEYLAAGKSGMLSEATIIGCGPHVTTHKR CCCCCCEEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCCHHHH HFNQQSEYTICRKIKEDRVFYCCHEEAFARDEGSQDLLFKYILPRSERGKVLERLHMMNI HCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHE TAYSLYGSEDSLISTLAYQEINRKRRI EEEEEECCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHVVNLATWEEFEGNVFALYQLLHPKVPENKSYVSPLLFRGHSNASWLLETTLERVAGKC CEEEEECCHHHHCCCHHEEHHHHCCCCCCCCCHHCHHHEECCCCCHHHHHHHHHHHHHHH FRADEYYNIMLSVQPAIQSFTEKTWEFAHSYPNDDGTPKPPPGYEFMAYLRHHGFPSPLL CCCCCEEEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHH DWSRSPYIAAFFAFQSPELHSHDDNVAIYVFVEYLAAGKSGMLSEATIIGCGPHVTTHKR CCCCCCEEEEEEEECCCCCCCCCCCEEEEEEHHHHHCCCCCCCCCEEEEECCCCCCHHHH HFNQQSEYTICRKIKEDRVFYCCHEEAFARDEGSQDLLFKYILPRSERGKVLERLHMMNI HCCCCHHHHHHHHHCCCCEEEEECCHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHE TAYSLYGSEDSLISTLAYQEINRKRRI EEEEEECCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA