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The map label for this gene is hdrD [H]

Identifier: 197116428

GI number: 197116428

Start: 34153

End: 35097

Strand: Reverse

Name: hdrD [H]

Synonym: Gbem_0028

Alternate gene names: 197116428

Gene position: 35097-34153 (Counterclockwise)

Preceding gene: 197116429

Following gene: 197116427

Centisome position: 0.76

GC content: 64.55

Gene sequence:

>945_bases
ATGAACGCTAAAGCAAACAAAAACCAGTCGAGCTGCATCGAGCCGTCCTACTACCAGGCGGTCACCCAGGCGATCCGCAC
GCAGGCAGTGCAGGTCCTTAAGGATGGAACCGTGGCCGGCGTTGTCGGTTACCTCCCTGGCCGCCGCAAAGGGACGGCCC
GCCCGGCCTTGATCACCACGCCGGAAGAGGCGGAAAAACTCATCTTCTCGCCGGCCTGCGTCAACAACCTCTCGGTCTAC
CTGACCAAGTCGAAGAAAGGGGTGCTAAAGCAGGGACGGATCGGCATCGTCGCCAAGGGATGCGACATGCGCGCACTGGC
CGGACTGATGGGGGAATCCCAGATCAAGCGGGAGGATCTTTTCATCATCGCCGTCGACTGCGCCGGGGTCTACGGCTCCG
GGGCCGAGCGCAGCGAGTCGGTGACCGAAGCCAACATCGCCAGAAAATGTGTGGAGTGCACGGTCCATCACCCGGAGGGG
GCTGATTTCGTGGCGGGCGCCGCCACCGAACTTTCCGGCCTGACCCCGCTGGAAGCCGAGGAGATGGCGCGCATCGAGGC
GCTGCCGCAGGCGGAGCGCTGGGCTTTCTGGAAAGAGCACTTTTCCCGCTGCATCCGGTGCATGGCCTGCCGCCAGGTCT
GCCCATTCTGCTACTGCGAGCAGTGCCTGTGCGACAAGAACCGCCCCCAGGCGGTGGAGAACTCCCCCAGGCCCGCAGGA
AACACCGCCTGGCACATCGTGCGTGCCATGCACCTGGCCGGGCGCTGCGGCGGCTGCGCCGAGTGCGAGCGCGTCTGCCC
GATGGACATCCCGCTGAACCTCCTGAACCGGCGCATGGCGAAGGAGCTGAAGGAGCTTTACGACTACGAGGCAGGGCTCG
CACCCGCCGAGAAAGGGCCGCTCACCCAGTACCGGGAAGACGACGACCAGTCGTTCATAAAGTAG

Upstream 100 bases:

>100_bases
AATCGCTGGAACACGAGGAGCAGTGGTCTGCCTTTCAAGCTATGGCGGACGTCCCCGGCGTCGTGAACACGCCTGAACTC
AAAGAGGCTTACGACAAGAT

Downstream 100 bases:

>100_bases
AAGCTGTTACCAGTTAGCAACACCCTCACCCCAGCCCCTCTCCCAGAGGGCGAGGGGTTCAAAGTCAAGGCGCGCCCAGC
TAGCGGCCTCCTTAGCCACC

Product: heterodisulfide reductase iron-sulfur cluster-binding subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MNAKANKNQSSCIEPSYYQAVTQAIRTQAVQVLKDGTVAGVVGYLPGRRKGTARPALITTPEEAEKLIFSPACVNNLSVY
LTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDLFIIAVDCAGVYGSGAERSESVTEANIARKCVECTVHHPEG
ADFVAGAATELSGLTPLEAEEMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVENSPRPAG
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGPLTQYREDDDQSFIK

Sequences:

>Translated_314_residues
MNAKANKNQSSCIEPSYYQAVTQAIRTQAVQVLKDGTVAGVVGYLPGRRKGTARPALITTPEEAEKLIFSPACVNNLSVY
LTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDLFIIAVDCAGVYGSGAERSESVTEANIARKCVECTVHHPEG
ADFVAGAATELSGLTPLEAEEMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVENSPRPAG
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGPLTQYREDDDQSFIK
>Mature_314_residues
MNAKANKNQSSCIEPSYYQAVTQAIRTQAVQVLKDGTVAGVVGYLPGRRKGTARPALITTPEEAEKLIFSPACVNNLSVY
LTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDLFIIAVDCAGVYGSGAERSESVTEANIARKCVECTVHHPEG
ADFVAGAATELSGLTPLEAEEMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVENSPRPAG
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGPLTQYREDDDQSFIK

Specific function: Catalyzes the oxidation of formate [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR007516
- InterPro:   IPR007525
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF04432 FrhB_FdhB_C; PF04422 FrhB_FdhB_N [H]

EC number: =1.2.1.2 [H]

Molecular weight: Translated: 34467; Mature: 34467

Theoretical pI: Translated: 7.64; Mature: 7.64

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAKANKNQSSCIEPSYYQAVTQAIRTQAVQVLKDGTVAGVVGYLPGRRKGTARPALITT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEC
PEEAEKLIFSPACVNNLSVYLTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDL
HHHHHHHCCCCHHHCCEEEEEECCCCCHHHCCCEEEEECCCCHHHHHHHHCHHHHCCCCE
FIIAVDCAGVYGSGAERSESVTEANIARKCVECTVHHPEGADFVAGAATELSGLTPLEAE
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCHHHHCCCCCCCHH
EMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVENSPRPAG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGP
CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LTQYREDDDQSFIK
CCCCCCCCHHHHCC
>Mature Secondary Structure
MNAKANKNQSSCIEPSYYQAVTQAIRTQAVQVLKDGTVAGVVGYLPGRRKGTARPALITT
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEC
PEEAEKLIFSPACVNNLSVYLTKSKKGVLKQGRIGIVAKGCDMRALAGLMGESQIKREDL
HHHHHHHCCCCHHHCCEEEEEECCCCCHHHCCCEEEEECCCCHHHHHHHHCHHHHCCCCE
FIIAVDCAGVYGSGAERSESVTEANIARKCVECTVHHPEGADFVAGAATELSGLTPLEAE
EEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCHHHCCHHHHCCCCCCCHH
EMARIEALPQAERWAFWKEHFSRCIRCMACRQVCPFCYCEQCLCDKNRPQAVENSPRPAG
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
NTAWHIVRAMHLAGRCGGCAECERVCPMDIPLNLLNRRMAKELKELYDYEAGLAPAEKGP
CHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
LTQYREDDDQSFIK
CCCCCCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3531194 [H]