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The map label for this gene is hdrE [H]

Identifier: 197116427

GI number: 197116427

Start: 32984

End: 33994

Strand: Reverse

Name: hdrE [H]

Synonym: Gbem_0027

Alternate gene names: 197116427

Gene position: 33994-32984 (Counterclockwise)

Preceding gene: 197116428

Following gene: 197116426

Centisome position: 0.74

GC content: 60.93

Gene sequence:

>1011_bases
ATGCCACAGATAATTACGGAACAGAACCTTCGCAATCTGATCGACCTCCTGGTCAAGGAGTCGAAAGTCGTGGTGGGACC
CAAACAGGCGGACTCAGTCGTCCTGTACCAGCCGCTTGCCGCCGGATCGGAACTCACGCTCGACTCGCTTCCCCGCCGCT
CGGCCAAAGAGCTGTTCTTTCCCATCTGCGAGAAAATCCTCTCCTACCAGAGGCAGGACGGGAAGATGCAGGTGACCGAC
GTGGACCGCTCCCGATTCCCGGAGACGGTGCTGATCGGCGCGCCACCCTGCGACGCCGCTTCTCCGGCCATCCTGGACGC
GGTCTTCTCATGGGACTACAACGACGAGTTCTACCTGGAGCGCCGCCGCAAGAGCACCATCGTGGGGATCGCCTGCACCA
AAGGTGATGACGCCTGTTTCTGCACCGCGGTCGGCTTGGCTCCTAATGCTGAGGCGGGAAGCGACCTGTTCCTCACCCCG
CTCAAGGACGGCTCCTATGCCTGCAAGGCGGTCACGGAAAAAGGAAAGGCTTTGGTCGATGCCCACGCTGGGCTCTTCGG
CGAAGCCGCTTCAGTGGATGCGGCCCCCTTCGCCGAGCAGGGGACGGAAAAGCTGGACCTGGTGAAGATCAAGAAGTGGC
TTGAGGGGCACTTCGAGGACCCGCTCTGGGAAAAAATCTCAGACATCTGCGTCGGCTGCGGCTCCTGCGCTTTCATATGC
CCGGCCTGCCACTGCTTCGACATCAATGACGAGGGGAGCACCGAGCAGGGTTCCCGCCGCAAGCACTGGGACGCCTGCGG
TTTCAGCAAGTTCACCAACCACGCCTCCGGCCACAACCCGCGCGACGTGCAGAACAAGCGCTACCGCAACCGGATCATGC
ACAAGTTCAAGTATTACGACGACAAATTCGGCAAGACGCTCTGCACCGGTTGCGGTCGCTGCGTCCGCGCCTGTCCGGTA
GGGATCGACATAGCCGAGATACTCAGCACCATCAACGCAAAGCAGGACTAA

Upstream 100 bases:

>100_bases
TCAAAGTCAAGGCGCGCCCAGCTAGCGGCCTCCTTAGCCACCTAAAGATCGTTGTCCATTGTCAATTGTCAATTGTCAAT
TGCTTTATAGGAGAATCCCT

Downstream 100 bases:

>100_bases
CCCCATCTCTCCCCCTCCCTTGACGGGCCTGCGCGCCATAGCGCTTCGGTCCGCGAAGGCGGGAGGGGGTCGGGGGGTGG
GTGAAGGTGCTATCGGCAAT

Product: heterodisulfide reductase iron-sulfur cluster-binding subunit

Products: NA

Alternate protein names: Anaerobic sulfite reductase iron-sulfur subunit [H]

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPQIITEQNLRNLIDLLVKESKVVVGPKQADSVVLYQPLAAGSELTLDSLPRRSAKELFFPICEKILSYQRQDGKMQVTD
VDRSRFPETVLIGAPPCDAASPAILDAVFSWDYNDEFYLERRRKSTIVGIACTKGDDACFCTAVGLAPNAEAGSDLFLTP
LKDGSYACKAVTEKGKALVDAHAGLFGEAASVDAAPFAEQGTEKLDLVKIKKWLEGHFEDPLWEKISDICVGCGSCAFIC
PACHCFDINDEGSTEQGSRRKHWDACGFSKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCVRACPV
GIDIAEILSTINAKQD

Sequences:

>Translated_336_residues
MPQIITEQNLRNLIDLLVKESKVVVGPKQADSVVLYQPLAAGSELTLDSLPRRSAKELFFPICEKILSYQRQDGKMQVTD
VDRSRFPETVLIGAPPCDAASPAILDAVFSWDYNDEFYLERRRKSTIVGIACTKGDDACFCTAVGLAPNAEAGSDLFLTP
LKDGSYACKAVTEKGKALVDAHAGLFGEAASVDAAPFAEQGTEKLDLVKIKKWLEGHFEDPLWEKISDICVGCGSCAFIC
PACHCFDINDEGSTEQGSRRKHWDACGFSKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCVRACPV
GIDIAEILSTINAKQD
>Mature_335_residues
PQIITEQNLRNLIDLLVKESKVVVGPKQADSVVLYQPLAAGSELTLDSLPRRSAKELFFPICEKILSYQRQDGKMQVTDV
DRSRFPETVLIGAPPCDAASPAILDAVFSWDYNDEFYLERRRKSTIVGIACTKGDDACFCTAVGLAPNAEAGSDLFLTPL
KDGSYACKAVTEKGKALVDAHAGLFGEAASVDAAPFAEQGTEKLDLVKIKKWLEGHFEDPLWEKISDICVGCGSCAFICP
ACHCFDINDEGSTEQGSRRKHWDACGFSKFTNHASGHNPRDVQNKRYRNRIMHKFKYYDDKFGKTLCTGCGRCVRACPVG
IDIAEILSTINAKQD

Specific function: Electron transfer protein for anaerobic sulfite reductase subunit A [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012285
- InterPro:   IPR009051
- InterPro:   IPR014259 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37031; Mature: 36900

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
5.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPQIITEQNLRNLIDLLVKESKVVVGPKQADSVVLYQPLAAGSELTLDSLPRRSAKELFF
CCCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHH
PICEKILSYQRQDGKMQVTDVDRSRFPETVLIGAPPCDAASPAILDAVFSWDYNDEFYLE
HHHHHHHHHHHCCCCEEEEECHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH
RRRKSTIVGIACTKGDDACFCTAVGLAPNAEAGSDLFLTPLKDGSYACKAVTEKGKALVD
HHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEH
AHAGLFGEAASVDAAPFAEQGTEKLDLVKIKKWLEGHFEDPLWEKISDICVGCGSCAFIC
HHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHC
PACHCFDINDEGSTEQGSRRKHWDACGFSKFTNHASGHNPRDVQNKRYRNRIMHKFKYYD
CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DKFGKTLCTGCGRCVRACPVGIDIAEILSTINAKQD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
PQIITEQNLRNLIDLLVKESKVVVGPKQADSVVLYQPLAAGSELTLDSLPRRSAKELFF
CCCCCHHHHHHHHHHHHHCCEEEECCCCCCCEEEEECCCCCCCCCHHHCCCHHHHHHHH
PICEKILSYQRQDGKMQVTDVDRSRFPETVLIGAPPCDAASPAILDAVFSWDYNDEFYLE
HHHHHHHHHHHCCCCEEEEECHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCHHHHH
RRRKSTIVGIACTKGDDACFCTAVGLAPNAEAGSDLFLTPLKDGSYACKAVTEKGKALVD
HHCCCEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHCCCEEEH
AHAGLFGEAASVDAAPFAEQGTEKLDLVKIKKWLEGHFEDPLWEKISDICVGCGSCAFIC
HHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHC
PACHCFDINDEGSTEQGSRRKHWDACGFSKFTNHASGHNPRDVQNKRYRNRIMHKFKYYD
CCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
DKFGKTLCTGCGRCVRACPVGIDIAEILSTINAKQD
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1704886; 11677609 [H]