| Definition | Geobacter bemidjiensis Bem chromosome, complete genome. |
|---|---|
| Accession | NC_011146 |
| Length | 4,615,150 |
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The map label for this gene is 197116425
Identifier: 197116425
GI number: 197116425
Start: 31442
End: 31696
Strand: Reverse
Name: 197116425
Synonym: Gbem_0025
Alternate gene names: NA
Gene position: 31696-31442 (Counterclockwise)
Preceding gene: 197116426
Following gene: 197116424
Centisome position: 0.69
GC content: 50.2
Gene sequence:
>255_bases ATGAAGACCAATATTATTCGCATCGGTAATTCACAAGGGGTACGTATTCCGAAAATCCTCCTTGAACAGAGTCGTCTCGG AACTGAGGTGGAATTGGAAGTACAGAACGAAATGATCGTGATACGGTCGGCCACTCAACCTCGAGACGGGTGGGCTGAAC AATTCAGGCTTATGTCCGAGTGCGGCGACGACAAGATGATTGACGAGGACCCGGGCGAACAAACGGACTGGGACAAGGAA GAATGGGAATGGTAG
Upstream 100 bases:
>100_bases GTTTATTGCCCTGGCTGGTTGCATGTCATTTAGAAAAATCTTGACGCGCGTCAGGCCCGTAATTACAATGTGTCCACCCT CAACAACGGAGGACATCGCT
Downstream 100 bases:
>100_bases TTAAACGTTTCGACATCTTCATGGTCAATCTTGACCCTACGGTTGGCAGCGAGATTCGCAAATTCCGCCCGTGCCTCATT ATTTCTCCCGACGAGATGAA
Product: antitoxin MazE
Products: NA
Alternate protein names: Antitoxin MazE; Growth Regulator Protein
Number of amino acids: Translated: 84; Mature: 84
Protein sequence:
>84_residues MKTNIIRIGNSQGVRIPKILLEQSRLGTEVELEVQNEMIVIRSATQPRDGWAEQFRLMSECGDDKMIDEDPGEQTDWDKE EWEW
Sequences:
>Translated_84_residues MKTNIIRIGNSQGVRIPKILLEQSRLGTEVELEVQNEMIVIRSATQPRDGWAEQFRLMSECGDDKMIDEDPGEQTDWDKE EWEW >Mature_84_residues MKTNIIRIGNSQGVRIPKILLEQSRLGTEVELEVQNEMIVIRSATQPRDGWAEQFRLMSECGDDKMIDEDPGEQTDWDKE EWEW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9850; Mature: 9850
Theoretical pI: Translated: 4.10; Mature: 4.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTNIIRIGNSQGVRIPKILLEQSRLGTEVELEVQNEMIVIRSATQPRDGWAEQFRLMSE CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHH CGDDKMIDEDPGEQTDWDKEEWEW CCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKTNIIRIGNSQGVRIPKILLEQSRLGTEVELEVQNEMIVIRSATQPRDGWAEQFRLMSE CCCCEEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCCHHHHHHHHHH CGDDKMIDEDPGEQTDWDKEEWEW CCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA