Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197106358

Identifier: 197106358

GI number: 197106358

Start: 3310077

End: 3311114

Strand: Direct

Name: 197106358

Synonym: PHZ_c2897

Alternate gene names: NA

Gene position: 3310077-3311114 (Clockwise)

Preceding gene: 197106356

Following gene: 197106359

Centisome position: 82.83

GC content: 76.4

Gene sequence:

>1038_bases
ATGCCCCGCCTGACGATCCTCTTGGCCGTCCTCGCCGCCGCTCTCAGCCTCGCCGGCGCCGCGGCGGCCCGGCCCTTGGT
CGCCATCCTCGCCGACGCCCGCGGCACGGTGGCTACCGACCTGATGGCGCCCTATGCGATCCTCGCCGAGAGCGGCGCCG
TCGACGTCCAGGTGGTCTCGGCCACGCGGGGGCCGGTGCGCCTCACGCCCGGCTACGCCTGGGTCCGGCCGCAGGCGAGC
CTGGCCGACCTCGCGCGGCGGCCGCCCGACGTGATCATCGTCCCCGCTCTCGAGGTGGAGGACGATCCCGCCCGGGCCGC
CTGGCTGCGGGACCAGCTCGCCCGCGGCGCCCGCATCATGTCCATCTGCAACGGCGCCCGGACGCTCGCCGCCGCCGGCC
TGCTGGACGGGCGGCAGGCCACCGTCCACTGGTACAGCCGCAACGAGATGCGCAAGCGCCATCCGAAGGTCCGCTGGCGC
GAGGACCGCCGCTGGGTCACCGACGGCCCGATCACCACCACCGCCGGGATCAGCGCGGGCGAGCCGGCCACCCTCCAGCT
CCTGCGCGAACTGGCCGGCGAGGACGTCATGCGGGCCACGGCCGCGCGCCTGTCCCTGCCCCTGCCCGACTCGCGCCACG
ACGGCGCCGCCTACCGGCTGACGCTCGGCGCCATGCGCCACGCCGCCTTCAACCGGCTGGCGTTCTGGACGCACGAGGAC
GTGGCGGTGCCGCTGTCCCCCGGCTTCGACGAGATCGCCTTCGGCACAGCCATCGACGCCTGGTCCCGCACCTGGCGCTC
GACGGCCTGGGCGAGCGGCGCCCCCGCCACCGTCTCGCGCCACGGCCTGGTGGTCTACCGGGCGCAGACCCCGCCGGGCC
GCTTCGACCGCCGCGCGCCCCTCCCCCGCCCGGACGTGATGCTCAACACCTTCGCCCAGGTCCGCCGCGCCTACGGCGGG
GCCACCGCCCGCTTCGTCGCCCTGCAGTTCGAGCACCCCGGTTTCCAACATCTCGGGGCCGCCGCCGGCCGCCGCTGA

Upstream 100 bases:

>100_bases
CGAGGAATGGGTGAACGCCTGGCAGAAACCGTTGGAACCTTGTCATTCCAGACAGCACCCGCCCCGGCGCATCCTCTCCC
CGAAAGGAAAGGAGCCTGCC

Downstream 100 bases:

>100_bases
GCGGAGGACCCTGGAAGTGCTCGGGCCGGCCCGGCTAGGGTGCGGGCGACCTGAGGGAGGACGAGGCATGCTCAACCACG
TGATGGTGGGATCGAACGAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator AraC Family; ThiJ/PfpI Domain-Containing Protein; AraC Family Transcription Regulator; AraC-Family Transcriptional Regulator; Transcriptional Activator FtrA; ADPA Family Transcriptional Regulator; ThiJ/PfpI Family Protein; AraC Family Regulatory Helix-Turn-Helix Protein; ThiJ/PfpI Domain Protein; DJ-1/PfpI Family; AraC Family Regulatory Protein; Transcriptional Regulator AraC Family Protein; A-Factor-Responsive Transcriptional Activator; Transcriptional Regulator Arac Family; Transcriptional Regulator SyrB; ThiJ/PfpI; Regulatory Protein; Transcription Regulator Protein; Transcriptional Regulator Protein AraC Family; Arac Family Transcriptional Regulator; Transcription Regulator; AraC Family Regulatory Helix-Turn-Helix; ThiJ/PfpI Family Transcriptional Regulator

Number of amino acids: Translated: 345; Mature: 344

Protein sequence:

>345_residues
MPRLTILLAVLAAALSLAGAAAARPLVAILADARGTVATDLMAPYAILAESGAVDVQVVSATRGPVRLTPGYAWVRPQAS
LADLARRPPDVIIVPALEVEDDPARAAWLRDQLARGARIMSICNGARTLAAAGLLDGRQATVHWYSRNEMRKRHPKVRWR
EDRRWVTDGPITTTAGISAGEPATLQLLRELAGEDVMRATAARLSLPLPDSRHDGAAYRLTLGAMRHAAFNRLAFWTHED
VAVPLSPGFDEIAFGTAIDAWSRTWRSTAWASGAPATVSRHGLVVYRAQTPPGRFDRRAPLPRPDVMLNTFAQVRRAYGG
ATARFVALQFEHPGFQHLGAAAGRR

Sequences:

>Translated_345_residues
MPRLTILLAVLAAALSLAGAAAARPLVAILADARGTVATDLMAPYAILAESGAVDVQVVSATRGPVRLTPGYAWVRPQAS
LADLARRPPDVIIVPALEVEDDPARAAWLRDQLARGARIMSICNGARTLAAAGLLDGRQATVHWYSRNEMRKRHPKVRWR
EDRRWVTDGPITTTAGISAGEPATLQLLRELAGEDVMRATAARLSLPLPDSRHDGAAYRLTLGAMRHAAFNRLAFWTHED
VAVPLSPGFDEIAFGTAIDAWSRTWRSTAWASGAPATVSRHGLVVYRAQTPPGRFDRRAPLPRPDVMLNTFAQVRRAYGG
ATARFVALQFEHPGFQHLGAAAGRR
>Mature_344_residues
PRLTILLAVLAAALSLAGAAAARPLVAILADARGTVATDLMAPYAILAESGAVDVQVVSATRGPVRLTPGYAWVRPQASL
ADLARRPPDVIIVPALEVEDDPARAAWLRDQLARGARIMSICNGARTLAAAGLLDGRQATVHWYSRNEMRKRHPKVRWRE
DRRWVTDGPITTTAGISAGEPATLQLLRELAGEDVMRATAARLSLPLPDSRHDGAAYRLTLGAMRHAAFNRLAFWTHEDV
AVPLSPGFDEIAFGTAIDAWSRTWRSTAWASGAPATVSRHGLVVYRAQTPPGRFDRRAPLPRPDVMLNTFAQVRRAYGGA
TARFVALQFEHPGFQHLGAAAGRR

Specific function: Unknown

COG id: COG0693

COG function: function code R; Putative intracellular protease/amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37327; Mature: 37196

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRLTILLAVLAAALSLAGAAAARPLVAILADARGTVATDLMAPYAILAESGAVDVQVVS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
ATRGPVRLTPGYAWVRPQASLADLARRPPDVIIVPALEVEDDPARAAWLRDQLARGARIM
CCCCCEEECCCEEEECCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHH
SICNGARTLAAAGLLDGRQATVHWYSRNEMRKRHPKVRWREDRRWVTDGPITTTAGISAG
HHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHCCCCCEECCCCEECCCCEEEECCCCCC
EPATLQLLRELAGEDVMRATAARLSLPLPDSRHDGAAYRLTLGAMRHAAFNRLAFWTHED
CHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEEEECCC
VAVPLSPGFDEIAFGTAIDAWSRTWRSTAWASGAPATVSRHGLVVYRAQTPPGRFDRRAP
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCC
LPRPDVMLNTFAQVRRAYGGATARFVALQFEHPGFQHLGAAAGRR
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCC
>Mature Secondary Structure 
PRLTILLAVLAAALSLAGAAAARPLVAILADARGTVATDLMAPYAILAESGAVDVQVVS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEE
ATRGPVRLTPGYAWVRPQASLADLARRPPDVIIVPALEVEDDPARAAWLRDQLARGARIM
CCCCCEEECCCEEEECCCCHHHHHHCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCHHHH
SICNGARTLAAAGLLDGRQATVHWYSRNEMRKRHPKVRWREDRRWVTDGPITTTAGISAG
HHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHCCCCCEECCCCEECCCCEEEECCCCCC
EPATLQLLRELAGEDVMRATAARLSLPLPDSRHDGAAYRLTLGAMRHAAFNRLAFWTHED
CHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEEEECCC
VAVPLSPGFDEIAFGTAIDAWSRTWRSTAWASGAPATVSRHGLVVYRAQTPPGRFDRRAP
EEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCC
LPRPDVMLNTFAQVRRAYGGATARFVALQFEHPGFQHLGAAAGRR
CCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA