Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is yrrI [H]

Identifier: 197106263

GI number: 197106263

Start: 3214073

End: 3215140

Strand: Direct

Name: yrrI [H]

Synonym: PHZ_c2802

Alternate gene names: 197106263

Gene position: 3214073-3215140 (Clockwise)

Preceding gene: 197106262

Following gene: 197106264

Centisome position: 80.43

GC content: 73.31

Gene sequence:

>1068_bases
GTGAGCGCGGGGCGGGGAAATCCGTTCGTCGGCCGCCTGCTGACGGTGGCGGCGTTCGTCGCGCTGGGCGCGCTCGTCTG
GAAGCTGGCGGACGTCATCCTGCTGGCCTTCGGGGCGGTGCTCACCGCCGTCCTGCTGCACGCCCTCGCCGACCCGCTGG
TCAGATACGCGCGCCTGCCCCGGCCCTGGGCCCTGACGGCGGCGGTGGTCGGCCTGACGGCGGCCACCTGGGGCACGCTG
TACCTGTTCGGCCGCGAGGCGGCCCTGCAGCTCGCCGCGCTCAGCGAGTTGCTGCCCAACGCCTGGCGGGCGCTGCAGGG
CGAGCTCTCGCGCTCGGTCCTGGGCGCCTACATCCTCGACGACCTGCGCAGCCTGCAGCACGCCGACGGCTTGATCGTGC
AGCTCGGCCCGCGGCTGATCCGCGGCTCGGCCAGCGCCGGGGCGGCGGCGGTGATCGTCCTCTTCGCGGGCCTCTATCTC
GCCTACAATCCAAGCACCTACCTCGGGGGGCTGCTGAAGCTCGTGCCGGCGCGCGGGCGCCAGCGCGCCGAGGAGGTGTT
CAAGGCCTGCGGCAAGGCGCTGAACCGCTGGCTGGTCGGCCAGCTGATCTCGATGATGCTGGTCGGCGTGACCACCGGCG
TGGGGCTGTGGCTGGCGGGCGTGCCTTCGCCGCTGGCGCTCGGCGTCGTCGCCGGCCTCGGCCAGTTCGTGCCGGTCGTG
GGGCCGATGGTCTCGATGATCCCCGGCCTCATCATCGCCGCCGGCGCCGGCTGGGAGACCCTGGCCTGGACCGCGGTGGT
CTATGTCGGCGCGATGCAGGCCGAGGCCAACGTCATCACCCCGCTGGTGCTGCGCCAGATGGTCGAGCTGCCGATGGCGG
TGACCCTGTTCGCGGTGCTGGCCATGGGCGTGCTGCTGGGGCCGCTGGGCGTGCTGTTCGCCACGCCGCTGGCGGTGGTC
GCCTATGTCGTCGTGCGGATGATCTACGTCGAGGACCTGCTGGGCGAGCGTCCCCCGGAGCGCCCAACGGAGCGCCCAAC
GGAGCGTCCCGCCGGCGGGACGGGATGA

Upstream 100 bases:

>100_bases
GCGCCCGCGAGTTCGTCCTGGGCGGGGCCACGGCCGCGATGCTGGACGCCCCGCCCTGCGCCGTGCTGCTCTCGCACTGA
GACAACCCGGGGGACGATTC

Downstream 100 bases:

>100_bases
GCCCCGCCCCCGACGCAGGCGAAAGGTTGCCTCCGGCCGCCTTCCCGCCTACGCCTGGGGCCATGGGGCCTCCGGACAAG
CTATCTCCACGCGCGTGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSAGRGNPFVGRLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALTAAVVGLTAATWGTL
YLFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILDDLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYL
AYNPSTYLGGLLKLVPARGRQRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVV
GPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVLAMGVLLGPLGVLFATPLAVV
AYVVVRMIYVEDLLGERPPERPTERPTERPAGGTG

Sequences:

>Translated_355_residues
MSAGRGNPFVGRLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALTAAVVGLTAATWGTL
YLFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILDDLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYL
AYNPSTYLGGLLKLVPARGRQRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVV
GPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVLAMGVLLGPLGVLFATPLAVV
AYVVVRMIYVEDLLGERPPERPTERPTERPAGGTG
>Mature_354_residues
SAGRGNPFVGRLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLPRPWALTAAVVGLTAATWGTLY
LFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILDDLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLA
YNPSTYLGGLLKLVPARGRQRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVVG
PMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVLAMGVLLGPLGVLFATPLAVVA
YVVVRMIYVEDLLGERPPERPTERPTERPAGGTG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0118 (perM) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002549 [H]

Pfam domain/function: PF01594 UPF0118 [H]

EC number: NA

Molecular weight: Translated: 37163; Mature: 37032

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAGRGNPFVGRLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPWALTAAVVGLTAATWGTLYLFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLAYNPSTYLGGLLKLVPARGR
HHHHHHHHCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
QRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AMGVLLGPLGVLFATPLAVVAYVVVRMIYVEDLLGERPPERPTERPTERPAGGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SAGRGNPFVGRLLTVAAFVALGALVWKLADVILLAFGAVLTAVLLHALADPLVRYARLP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RPWALTAAVVGLTAATWGTLYLFGREAALQLAALSELLPNAWRALQGELSRSVLGAYILD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DLRSLQHADGLIVQLGPRLIRGSASAGAAAVIVLFAGLYLAYNPSTYLGGLLKLVPARGR
HHHHHHHHCCHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCH
QRAEEVFKACGKALNRWLVGQLISMMLVGVTTGVGLWLAGVPSPLALGVVAGLGQFVPVV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
GPMVSMIPGLIIAAGAGWETLAWTAVVYVGAMQAEANVITPLVLRQMVELPMAVTLFAVL
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
AMGVLLGPLGVLFATPLAVVAYVVVRMIYVEDLLGERPPERPTERPTERPAGGTG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]