Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106244

Identifier: 197106244

GI number: 197106244

Start: 3192167

End: 3192583

Strand: Direct

Name: 197106244

Synonym: PHZ_c2783

Alternate gene names: NA

Gene position: 3192167-3192583 (Clockwise)

Preceding gene: 197106243

Following gene: 197106245

Centisome position: 79.88

GC content: 74.1

Gene sequence:

>417_bases
ATGACCGCGACGAGCGAGCCCTCCGCGTCCCGGCTGATCGATGCGCGGATCGCCGAGCTGGGCGACTGGCGCGGGGAGAC
GCTGGCGCGGGTGCGGGCGCTGATCCACGAGGCCTGTCCGGACGTGACGGAGGAGTGGAAGTGGCGCGGGGTGCCGGTGT
GGTCGCAGGACGGCATCCTGTGCACCGGCGAGACCTACAAGGCGGCGGTGAAGCTGACGTTCGCGAAGGGGGCGGCGCTG
CCCGACCCGGCCGGCCTGTTCAACGCCAGCCTGGAGGGGAACACCCGCCGGGCCATCGACATCCACGAGGGCGAGGCGCT
GGAGCCCGAGGCGTTCAAGGCGCTGATCCGGGCGGCCGCCGCGCTGAACGGGGGCAAGCGGGGCCGCGGCTCGACAGCGG
CGGGCGGCGCATCCTAG

Upstream 100 bases:

>100_bases
TGGGGCGGTCGCAGGTCCGCTGGCGCGGGCCCCCTCTCCTCGATCCTCTCCCTCTCGCTTCGCGGGGGAGAGGAGGGGAC
AGAGACCTGAGGAGACCGAC

Downstream 100 bases:

>100_bases
CAAGGGCGCCCGTCCCGGAGTTCCGCATGCGTCCGACCGCCCTCGCCCTCGGCCTGCTGGCCGCCCTCGCCGCGCTGCCG
GCCAGCGCCCAGAGCGAACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTATSEPSASRLIDARIAELGDWRGETLARVRALIHEACPDVTEEWKWRGVPVWSQDGILCTGETYKAAVKLTFAKGAAL
PDPAGLFNASLEGNTRRAIDIHEGEALEPEAFKALIRAAAALNGGKRGRGSTAAGGAS

Sequences:

>Translated_138_residues
MTATSEPSASRLIDARIAELGDWRGETLARVRALIHEACPDVTEEWKWRGVPVWSQDGILCTGETYKAAVKLTFAKGAAL
PDPAGLFNASLEGNTRRAIDIHEGEALEPEAFKALIRAAAALNGGKRGRGSTAAGGAS
>Mature_137_residues
TATSEPSASRLIDARIAELGDWRGETLARVRALIHEACPDVTEEWKWRGVPVWSQDGILCTGETYKAAVKLTFAKGAALP
DPAGLFNASLEGNTRRAIDIHEGEALEPEAFKALIRAAAALNGGKRGRGSTAAGGAS

Specific function: Unknown

COG id: COG5649

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14558; Mature: 14426

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATSEPSASRLIDARIAELGDWRGETLARVRALIHEACPDVTEEWKWRGVPVWSQDGIL
CCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCEE
CTGETYKAAVKLTFAKGAALPDPAGLFNASLEGNTRRAIDIHEGEALEPEAFKALIRAAA
EECCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
ALNGGKRGRGSTAAGGAS
HHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TATSEPSASRLIDARIAELGDWRGETLARVRALIHEACPDVTEEWKWRGVPVWSQDGIL
CCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHCCCCCCCEECCCCEE
CTGETYKAAVKLTFAKGAALPDPAGLFNASLEGNTRRAIDIHEGEALEPEAFKALIRAAA
EECCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHH
ALNGGKRGRGSTAAGGAS
HHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA