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The map label for this gene is ybaC [H]

Identifier: 197106245

GI number: 197106245

Start: 3192610

End: 3193746

Strand: Direct

Name: ybaC [H]

Synonym: PHZ_c2784

Alternate gene names: 197106245

Gene position: 3192610-3193746 (Clockwise)

Preceding gene: 197106244

Following gene: 197106247

Centisome position: 79.89

GC content: 71.68

Gene sequence:

>1137_bases
ATGCGTCCGACCGCCCTCGCCCTCGGCCTGCTGGCCGCCCTCGCCGCGCTGCCGGCCAGCGCCCAGAGCGAACCGAAGCC
GTTCTCGCGCGACGACGCGCGGGCGATCATCCGGGACGCGCGCAAGATCGTCTCGCCGCAGGGGATCGAGGAGCTGCGGG
CCGTGGAGATCAACGGCCTGCCGCAGTGGATCAGCGTGCGCGGCCGCGACCGGCGCAACCCGATCCTGCTGTTCATCCAC
GGCGGCCCGGCCTCGACCGAAATGCCGGTGAGCTGGCTGTACCAGAGCCCGTGGGAGGACTTCTTCACCGTCGTCCAGTG
GGACCAGCGGGCGGCGGGCAAGACCGCGGTCGGCGCCGACCACGCCGCGGTCGGCCCGACGGTGACGGTCGAGCAGATGA
CCGCCGACGGCGAGGCGATGGTCGCCCACCTGCGCGAGCGCTACGGCAAGGAGAAGGTCTTCGTTCTCGGCCATTCGTGG
GGCTCGGTGATCGGGCTGAACCTGGCCCGGCGGCGGCCCGAGTGGCTGCACGCCTACGTCGGCATGGGCCAGATCGTGGA
CTGGAACGCCAACGAGGCCGCCGGCTACGACTTCGCCCTGCGCATGGCCCGGGCCGACGGCAACGCCCAGGCGGTGCGAG
AGCTGGAGGCGCTCGCCCCCTACCCGCCGGCCGAAGGCGTGCTGTCGTTCGAGCAGGTGGTGACCCAGCGCAAGTGGGTG
ATCCACTACGGCGGGCTGACCATGGGACGGTCCGACTTCGCCTACGACCTCAACGCCCGGAAGATCTCGCCGGACTACAC
CGACCGGGACCTGTCGCCCGGCGTGCCGGACGGCGATGCGCTGATCCGGCTGCTGCCCGGCATGACGGCGCTGGACTTCG
CGCAGGTGAACCGGGTGGAGACGCCGGTGTTCCTGTTCCTGGGCCGCCGCGACTACCAGACGCCCTCGAAGGTCGCCGCC
GACTGGCACGCCAGGCTGCAGGCGCCGCAGAAGGGGCTGTTCTGGTTCGAACGGTCGGCGCACATGATGCACCTGGAACA
GCCCGGGAAGGTCCTGATGCACCTCGTCAACGACATCCGGCCGATCGCCGAGCGGGCGGGCGACGTCGCCCCGCCCGACC
GGCCGGGCGTGGACTGA

Upstream 100 bases:

>100_bases
TGATCCGGGCGGCCGCCGCGCTGAACGGGGGCAAGCGGGGCCGCGGCTCGACAGCGGCGGGCGGCGCATCCTAGCAAGGG
CGCCCGTCCCGGAGTTCCGC

Downstream 100 bases:

>100_bases
TGCGGCGGCTGATCGCCGCCGCCGGCGCCGGCCTGCTGCTGGCCGCGTGTGGGCGGGAGGAGGAGCGCGCGCCCGAGGCG
CCGCCCGTGCTGGAGGTCCC

Product: hydrolase, alpha/beta fold family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MRPTALALGLLAALAALPASAQSEPKPFSRDDARAIIRDARKIVSPQGIEELRAVEINGLPQWISVRGRDRRNPILLFIH
GGPASTEMPVSWLYQSPWEDFFTVVQWDQRAAGKTAVGADHAAVGPTVTVEQMTADGEAMVAHLRERYGKEKVFVLGHSW
GSVIGLNLARRRPEWLHAYVGMGQIVDWNANEAAGYDFALRMARADGNAQAVRELEALAPYPPAEGVLSFEQVVTQRKWV
IHYGGLTMGRSDFAYDLNARKISPDYTDRDLSPGVPDGDALIRLLPGMTALDFAQVNRVETPVFLFLGRRDYQTPSKVAA
DWHARLQAPQKGLFWFERSAHMMHLEQPGKVLMHLVNDIRPIAERAGDVAPPDRPGVD

Sequences:

>Translated_378_residues
MRPTALALGLLAALAALPASAQSEPKPFSRDDARAIIRDARKIVSPQGIEELRAVEINGLPQWISVRGRDRRNPILLFIH
GGPASTEMPVSWLYQSPWEDFFTVVQWDQRAAGKTAVGADHAAVGPTVTVEQMTADGEAMVAHLRERYGKEKVFVLGHSW
GSVIGLNLARRRPEWLHAYVGMGQIVDWNANEAAGYDFALRMARADGNAQAVRELEALAPYPPAEGVLSFEQVVTQRKWV
IHYGGLTMGRSDFAYDLNARKISPDYTDRDLSPGVPDGDALIRLLPGMTALDFAQVNRVETPVFLFLGRRDYQTPSKVAA
DWHARLQAPQKGLFWFERSAHMMHLEQPGKVLMHLVNDIRPIAERAGDVAPPDRPGVD
>Mature_378_residues
MRPTALALGLLAALAALPASAQSEPKPFSRDDARAIIRDARKIVSPQGIEELRAVEINGLPQWISVRGRDRRNPILLFIH
GGPASTEMPVSWLYQSPWEDFFTVVQWDQRAAGKTAVGADHAAVGPTVTVEQMTADGEAMVAHLRERYGKEKVFVLGHSW
GSVIGLNLARRRPEWLHAYVGMGQIVDWNANEAAGYDFALRMARADGNAQAVRELEALAPYPPAEGVLSFEQVVTQRKWV
IHYGGLTMGRSDFAYDLNARKISPDYTDRDLSPGVPDGDALIRLLPGMTALDFAQVNRVETPVFLFLGRRDYQTPSKVAA
DWHARLQAPQKGLFWFERSAHMMHLEQPGKVLMHLVNDIRPIAERAGDVAPPDRPGVD

Specific function: Probable aminopeptidase [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S33 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR002410 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 41865; Mature: 41865

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00120 LIPASE_SER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPTALALGLLAALAALPASAQSEPKPFSRDDARAIIRDARKIVSPQGIEELRAVEINGL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEECCC
PQWISVRGRDRRNPILLFIHGGPASTEMPVSWLYQSPWEDFFTVVQWDQRAAGKTAVGAD
CCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
HAAVGPTVTVEQMTADGEAMVAHLRERYGKEKVFVLGHSWGSVIGLNLARRRPEWLHAYV
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHCCHHHHCCHHHHHHHH
GMGQIVDWNANEAAGYDFALRMARADGNAQAVRELEALAPYPPAEGVLSFEQVVTQRKWV
CCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE
IHYGGLTMGRSDFAYDLNARKISPDYTDRDLSPGVPDGDALIRLLPGMTALDFAQVNRVE
EEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCC
TPVFLFLGRRDYQTPSKVAADWHARLQAPQKGLFWFERSAHMMHLEQPGKVLMHLVNDIR
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHH
PIAERAGDVAPPDRPGVD
HHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MRPTALALGLLAALAALPASAQSEPKPFSRDDARAIIRDARKIVSPQGIEELRAVEINGL
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHEEEECCC
PQWISVRGRDRRNPILLFIHGGPASTEMPVSWLYQSPWEDFFTVVQWDQRAAGKTAVGAD
CCEEEECCCCCCCCEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
HAAVGPTVTVEQMTADGEAMVAHLRERYGKEKVFVLGHSWGSVIGLNLARRRPEWLHAYV
CCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCHHCCHHHHCCHHHHHHHH
GMGQIVDWNANEAAGYDFALRMARADGNAQAVRELEALAPYPPAEGVLSFEQVVTQRKWV
CCCEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCEE
IHYGGLTMGRSDFAYDLNARKISPDYTDRDLSPGVPDGDALIRLLPGMTALDFAQVNRVE
EEECCEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCC
TPVFLFLGRRDYQTPSKVAADWHARLQAPQKGLFWFERSAHMMHLEQPGKVLMHLVNDIR
CCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCEEEECCHHHHHHHHHHHHH
PIAERAGDVAPPDRPGVD
HHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969501; 9384377 [H]