| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is gcvR [C]
Identifier: 197106238
GI number: 197106238
Start: 3186610
End: 3187140
Strand: Direct
Name: gcvR [C]
Synonym: PHZ_c2777
Alternate gene names: 197106238
Gene position: 3186610-3187140 (Clockwise)
Preceding gene: 197106237
Following gene: 197106239
Centisome position: 79.74
GC content: 75.33
Gene sequence:
>531_bases GTGGCGTCGGTGATCCTGAGCGTGAGCGGCAGCGACCGGCCGGGCCTGACCGAGGCGCTGGCGCGCGCGGTGCAGGCCGG CGGCGGCAACTGGCTGGAGAGCCACTTGAGCCGGCTGGGCGGGCTCTATGTGGGCTCGGTGCTGGTGGCCCTGGACGAAG GCCGCATCGAGGCCCTGCGCGAGGCCGTCCGCGCCGTGGACGCCGAGGGCCTGGACGTGCGGATCGCGCCCGCGCTGGAG GGGGCCCCGGAGGGCGCGGCCGGCGAGGCCCTGCAGTTCAGCCTGGTGGGCCAGGACCGGCCCGGCATCGTGCGCCAGGT GACCGGGGCGCTGAGCGGCCTTTCCGTCAACATCGAGACGTTCGAGACGCGGACCAGCGCCGAGCCGCATTCCGGCGCCC CGCTGTTCCACCTCGAGGCGCGGCTTCGGCTGCCCGCGGGCCTGCCGGCCGACAAGGTGCAGGCCGCCCTGGAGGCGATC TCGGGCGAGATCATGGTCGATACGGTGCTGAAGCCGGCGGCCGGGGCGTGA
Upstream 100 bases:
>100_bases CCGGGCCGCGGGCGAGCTGCTGTATCCCTGACCCTCATTAGCGCTTGAGCCCGCCGCGCGCCGGGCCTCTGATGGCCTCT CGCGGAGAGGGAGAAGATCA
Downstream 100 bases:
>100_bases GCGCCATGCCCGGCGCGGCCGAGACGGTGACCGGCGGCTGCCTGTGCGGCGCCGTGCGGATCGCGGCCGCCGGCCGGCCC GACCGCGTCGGCCTCTGCCA
Product: glycine cleavage system transcriptional repressor
Products: NA
Alternate protein names: ACT Domain Protein; Glycine Cleavage System Regulatory Protein; Glycine Cleavage System Transcriptional Repressor; Formyl Transferase-Like; ACT Domain-Containing Regulatory Protein; Phosphoserine Phosphatase
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MASVILSVSGSDRPGLTEALARAVQAGGGNWLESHLSRLGGLYVGSVLVALDEGRIEALREAVRAVDAEGLDVRIAPALE GAPEGAAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIETFETRTSAEPHSGAPLFHLEARLRLPAGLPADKVQAALEAI SGEIMVDTVLKPAAGA
Sequences:
>Translated_176_residues MASVILSVSGSDRPGLTEALARAVQAGGGNWLESHLSRLGGLYVGSVLVALDEGRIEALREAVRAVDAEGLDVRIAPALE GAPEGAAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIETFETRTSAEPHSGAPLFHLEARLRLPAGLPADKVQAALEAI SGEIMVDTVLKPAAGA >Mature_175_residues ASVILSVSGSDRPGLTEALARAVQAGGGNWLESHLSRLGGLYVGSVLVALDEGRIEALREAVRAVDAEGLDVRIAPALEG APEGAAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIETFETRTSAEPHSGAPLFHLEARLRLPAGLPADKVQAALEAIS GEIMVDTVLKPAAGA
Specific function: Negative Transcriptional Regulator Of The Glycine Cleavage System Operon (Gcv). Does Not Autoregulate Its Own Expression. It Is Not Yet Known How Gcvr Acts As A Repressor. It Does Not Seem To Bind DNA. It Could Interact With Gcva And Suppress Its Activat
COG id: COG2716
COG function: function code E; Glycine cleavage system regulatory protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18007; Mature: 17875
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVILSVSGSDRPGLTEALARAVQAGGGNWLESHLSRLGGLYVGSVLVALDEGRIEALR CCEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHH EAVRAVDAEGLDVRIAPALEGAPEGAAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIET HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEE FETRTSAEPHSGAPLFHLEARLRLPAGLPADKVQAALEAISGEIMVDTVLKPAAGA EECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHCCCCCC >Mature Secondary Structure ASVILSVSGSDRPGLTEALARAVQAGGGNWLESHLSRLGGLYVGSVLVALDEGRIEALR CEEEEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHH EAVRAVDAEGLDVRIAPALEGAPEGAAGEALQFSLVGQDRPGIVRQVTGALSGLSVNIET HHHHHCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEE FETRTSAEPHSGAPLFHLEARLRLPAGLPADKVQAALEAISGEIMVDTVLKPAAGA EECCCCCCCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEEHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA