| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106237
Identifier: 197106237
GI number: 197106237
Start: 3185461
End: 3186540
Strand: Direct
Name: 197106237
Synonym: PHZ_c2776
Alternate gene names: NA
Gene position: 3185461-3186540 (Clockwise)
Preceding gene: 197106236
Following gene: 197106238
Centisome position: 79.71
GC content: 77.41
Gene sequence:
>1080_bases ATGGGCGCATGGTCGCGACGCGGTGCGATGGCGGCGGGGCTCGCCGCCTGCTGCGGGTGGGCCCCCGCGTGGACCCAGGC GAGCCCGGGCGGCGGCTGGGTCTGTCCGCCCTGCGGCTGCGCGGCGGACGGGCGGGTGTTCGACGCCCCCGGACGCTGCC CCGCCTGCGGCATGGCCCTGGTCCCCACCGCCGACGGCCCGCCCGCGCCGGGCGCCCTGCCCGCAGGCTCGGGCGCCTTC ACCGTTCCCGGCGGAGCGAGGCGGGAGGACGCCCGGATCACCGTCCACTACCACCGGCCGGCCAGCTTCCGGCCGGACTC CCCCGTCCTGCTGGTGCTGCCGGGGACGGGGCGCAACGGCGGGCCCTACCGCGACGCCTGGACCCGCCTGGCCGAGGCGC GCGGCGTGCTGGTCGCCGCCCTCGCCTATCCCGAGGACCAGTACGACTTCGCCGCCTACCACCTGGGCGGGACGGTGCGG AACCTGCGCCTGCCGCCGACCGGCGGGGCGAGCGTCATACGGCTGCGCGACGAGGAGATCCGGTTCGAGGTTGAGACCGA CCGCTCCCGCTGGCTGTTCGGCGACTTCGACCGCGTGTTCGGCGTCCTGGCCGCCGCCGCCGGGGCCAGGCGCGAGCGCT ACGACCTCTTCGGCCATTCGGCGGGCGGCCAGGTGCTGCACCGGCTGGCCCTGTTCCATCCGACCTCGCGGGCCGACCGC ATCGTGGCGGCGAACGCCGGCTTCTACACCCTGCCCGACCTGAGCCTTGCGCCCCTGCCCGGCCTGAAGGGGACGGGCCT GACCCCGGACGACCTGCGGGCGGCGCTCGCCAGCCGCCTGACCGTCCTGCTGGGCGAGGAAGACAACGACCCCGAGGGCG GCGGGACCATGCTGCACACCCCGGCCATCGACCGCCAGGGCCTGCACCGCCTGGCGCGCGGGCGGACGTTCTTCGAGGCC GGGCGGCGCGCGGCGGCCGGGCTGGACGCGCCCTTCGCCTGGCGGCTCCAGACCGTGCCCGGCGTCGGCCACGACTTCCG CGGCATGGCCCGGGCCGCGGGCGAGCTGCTGTATCCCTGA
Upstream 100 bases:
>100_bases GGGAAAGGAAGGGGGCGATGGCTGGAAATGACCGGGGGTTGGCCTTTCGGCCGGGGCGGCGGCGGGTAGTCTGGGCGCCT CGGGTCGGGAGGACACCGGC
Downstream 100 bases:
>100_bases CCCTCATTAGCGCTTGAGCCCGCCGCGCGCCGGGCCTCTGATGGCCTCTCGCGGAGAGGGAGAAGATCAGTGGCGTCGGT GATCCTGAGCGTGAGCGGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 359; Mature: 358
Protein sequence:
>359_residues MGAWSRRGAMAAGLAACCGWAPAWTQASPGGGWVCPPCGCAADGRVFDAPGRCPACGMALVPTADGPPAPGALPAGSGAF TVPGGARREDARITVHYHRPASFRPDSPVLLVLPGTGRNGGPYRDAWTRLAEARGVLVAALAYPEDQYDFAAYHLGGTVR NLRLPPTGGASVIRLRDEEIRFEVETDRSRWLFGDFDRVFGVLAAAAGARRERYDLFGHSAGGQVLHRLALFHPTSRADR IVAANAGFYTLPDLSLAPLPGLKGTGLTPDDLRAALASRLTVLLGEEDNDPEGGGTMLHTPAIDRQGLHRLARGRTFFEA GRRAAAGLDAPFAWRLQTVPGVGHDFRGMARAAGELLYP
Sequences:
>Translated_359_residues MGAWSRRGAMAAGLAACCGWAPAWTQASPGGGWVCPPCGCAADGRVFDAPGRCPACGMALVPTADGPPAPGALPAGSGAF TVPGGARREDARITVHYHRPASFRPDSPVLLVLPGTGRNGGPYRDAWTRLAEARGVLVAALAYPEDQYDFAAYHLGGTVR NLRLPPTGGASVIRLRDEEIRFEVETDRSRWLFGDFDRVFGVLAAAAGARRERYDLFGHSAGGQVLHRLALFHPTSRADR IVAANAGFYTLPDLSLAPLPGLKGTGLTPDDLRAALASRLTVLLGEEDNDPEGGGTMLHTPAIDRQGLHRLARGRTFFEA GRRAAAGLDAPFAWRLQTVPGVGHDFRGMARAAGELLYP >Mature_358_residues GAWSRRGAMAAGLAACCGWAPAWTQASPGGGWVCPPCGCAADGRVFDAPGRCPACGMALVPTADGPPAPGALPAGSGAFT VPGGARREDARITVHYHRPASFRPDSPVLLVLPGTGRNGGPYRDAWTRLAEARGVLVAALAYPEDQYDFAAYHLGGTVRN LRLPPTGGASVIRLRDEEIRFEVETDRSRWLFGDFDRVFGVLAAAAGARRERYDLFGHSAGGQVLHRLALFHPTSRADRI VAANAGFYTLPDLSLAPLPGLKGTGLTPDDLRAALASRLTVLLGEEDNDPEGGGTMLHTPAIDRQGLHRLARGRTFFEAG RRAAAGLDAPFAWRLQTVPGVGHDFRGMARAAGELLYP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37935; Mature: 37804
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAWSRRGAMAAGLAACCGWAPAWTQASPGGGWVCPPCGCAADGRVFDAPGRCPACGMAL CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCEEE VPTADGPPAPGALPAGSGAFTVPGGARREDARITVHYHRPASFRPDSPVLLVLPGTGRNG EECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC GPYRDAWTRLAEARGVLVAALAYPEDQYDFAAYHLGGTVRNLRLPPTGGASVIRLRDEEI CCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCEE RFEVETDRSRWLFGDFDRVFGVLAAAAGARRERYDLFGHSAGGQVLHRLALFHPTSRADR EEEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE IVAANAGFYTLPDLSLAPLPGLKGTGLTPDDLRAALASRLTVLLGEEDNDPEGGGTMLHT EEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEC PAIDRQGLHRLARGRTFFEAGRRAAAGLDAPFAWRLQTVPGVGHDFRGMARAAGELLYP CCCCHHHHHHHHHCCHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure GAWSRRGAMAAGLAACCGWAPAWTQASPGGGWVCPPCGCAADGRVFDAPGRCPACGMAL CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCCEEECCCCCCCCCCEEE VPTADGPPAPGALPAGSGAFTVPGGARREDARITVHYHRPASFRPDSPVLLVLPGTGRNG EECCCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCCCCC GPYRDAWTRLAEARGVLVAALAYPEDQYDFAAYHLGGTVRNLRLPPTGGASVIRLRDEEI CCHHHHHHHHHHHCCEEEEEEECCCCCCCEEEEECCCCEEEEECCCCCCCEEEEEECCEE RFEVETDRSRWLFGDFDRVFGVLAAAAGARRERYDLFGHSAGGQVLHRLALFHPTSRADR EEEEECCCCCEEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCE IVAANAGFYTLPDLSLAPLPGLKGTGLTPDDLRAALASRLTVLLGEEDNDPEGGGTMLHT EEEECCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCCCCCCCCEEEEC PAIDRQGLHRLARGRTFFEAGRRAAAGLDAPFAWRLQTVPGVGHDFRGMARAAGELLYP CCCCHHHHHHHHHCCHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA