Click here to switch to the map view.

The map label for this gene is 197106121

Identifier: 197106121

GI number: 197106121

Start: 3052263

End: 3052856

Strand: Direct

Name: 197106121

Synonym: PHZ_c2660

Alternate gene names: NA

Gene position: 3052263-3052856 (Clockwise)

Preceding gene: 197106120

Following gene: 197106122

Centisome position: 76.38

GC content: 71.04

Gene sequence:

>594_bases
TTGCGCAAGGGTGAGGCGACGCGCCTCCGGATCATCGACGAAGCGGCCCGCCAGGCGGCGTCCCGCGGCCTGGGCCCGGT
CAGCCTCGCCGACGTGGCCGAGGCGGTGGGCCTGTCGAAGAGCGGCCTCTTCAAGCACTTCGATTCGAAAGAGGCGATGG
AGCTGGCGGTCATCGACCATGTCAGCCGGCTCTTCACCGAATTCGTCTGGCGGCCGGCCGAGGGGCTGCCCACCGCCCGC
GCGCGGCTGTCGCGGATCTTCGAGCTGTGGCTCGACTGGGAGGAGAAGGAGTGGGCCAAGGGCGGCTGCCCGCTCATGGC
CTTCAGCGTCGAGCTGGACGACCAGCCGGGGCCCGCCCGCGACCTCCTGCAGAAGCGGCTGCAGCAGTGGAAGCGTACGC
TGGTGCGCCAGTTCCAGGAGATGCGTGAGCCGCCGCTCTCCGAGCCCGAGGCGCAGGCGGCCTATTTCCAGATGAAGAGC
TTCGCGCTCGGCCACTTGGACGCCCGCCGGATCATGGGCGACGCCGACGCGCGCCGATCGGCCCAGGCGGCCTTCGCGGC
CCTGCTGGACCGCACGGAACGTCAGGCGGCCTGA

Upstream 100 bases:

>100_bases
TGCATTCTCGTGATCCTTTCGGTAGAAAAGAGCACGACCGGTCGCTAAGCCCGGAAAGAGCACGATCGGTCACTTTCTGT
CAAGCAGGGAGGCTTGGCCT

Downstream 100 bases:

>100_bases
CGGCTGCTGCGGAACCTCGCCCGCCCGCCCCGCGTACTCCTTGCTGACCCAAGGAGACATCACATGCACAAGGACGAGAT
GAAGGGCGCCGGCAAGGACC

Product: transcriptional regulator, TetR family

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MRKGEATRLRIIDEAARQAASRGLGPVSLADVAEAVGLSKSGLFKHFDSKEAMELAVIDHVSRLFTEFVWRPAEGLPTAR
ARLSRIFELWLDWEEKEWAKGGCPLMAFSVELDDQPGPARDLLQKRLQQWKRTLVRQFQEMREPPLSEPEAQAAYFQMKS
FALGHLDARRIMGDADARRSAQAAFAALLDRTERQAA

Sequences:

>Translated_197_residues
MRKGEATRLRIIDEAARQAASRGLGPVSLADVAEAVGLSKSGLFKHFDSKEAMELAVIDHVSRLFTEFVWRPAEGLPTAR
ARLSRIFELWLDWEEKEWAKGGCPLMAFSVELDDQPGPARDLLQKRLQQWKRTLVRQFQEMREPPLSEPEAQAAYFQMKS
FALGHLDARRIMGDADARRSAQAAFAALLDRTERQAA
>Mature_197_residues
MRKGEATRLRIIDEAARQAASRGLGPVSLADVAEAVGLSKSGLFKHFDSKEAMELAVIDHVSRLFTEFVWRPAEGLPTAR
ARLSRIFELWLDWEEKEWAKGGCPLMAFSVELDDQPGPARDLLQKRLQQWKRTLVRQFQEMREPPLSEPEAQAAYFQMKS
FALGHLDARRIMGDADARRSAQAAFAALLDRTERQAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22251; Mature: 22251

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGEATRLRIIDEAARQAASRGLGPVSLADVAEAVGLSKSGLFKHFDSKEAMELAVIDH
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
VSRLFTEFVWRPAEGLPTARARLSRIFELWLDWEEKEWAKGGCPLMAFSVELDDQPGPAR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCHH
DLLQKRLQQWKRTLVRQFQEMREPPLSEPEAQAAYFQMKSFALGHLDARRIMGDADARRS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQAAFAALLDRTERQAA
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKGEATRLRIIDEAARQAASRGLGPVSLADVAEAVGLSKSGLFKHFDSKEAMELAVIDH
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHH
VSRLFTEFVWRPAEGLPTARARLSRIFELWLDWEEKEWAKGGCPLMAFSVELDDQPGPAR
HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEEEECCCCCCHH
DLLQKRLQQWKRTLVRQFQEMREPPLSEPEAQAAYFQMKSFALGHLDARRIMGDADARRS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
AQAAFAALLDRTERQAA
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA