| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106090
Identifier: 197106090
GI number: 197106090
Start: 3018524
End: 3019069
Strand: Direct
Name: 197106090
Synonym: PHZ_c2629
Alternate gene names: NA
Gene position: 3018524-3019069 (Clockwise)
Preceding gene: 197106088
Following gene: 197106094
Centisome position: 75.53
GC content: 74.36
Gene sequence:
>546_bases ATGAAGAAGTCTCTCCTAGTCGCCGTGGCGGTGCTGACCGCCGCCGGGCCGATCGCGACCTCCGCGGCCATGGCCCAGCC CCGCGACCGCGAGGTCCGGGAAAGCCGGCGCGAGCTGCGCGAGGAACGCCGCGAGCTGCGCGACGAACGCCACGATGCCC GCCGCGACGGCGTGGTCACGCCTCGCGAGCGCCGCGCCATCGAGCGCGACCGCCAGGACGTGCGCGAGGCCCGCCGCGAG CTGCGCTTCGACCGGCGCCGCGCCGAGACCTGGCGCGATCGGGCCGAATGGCGCGCCTATCGCGGCGACCGCCAGGGGTA CTGGTACGCGCCCGGCTACGGCTACCGGCCCTACATGCGCAGCTACGCCTGGCGGCGCGGCGCCTACGTGCCGCGGGCCT ACCGCAGCTACTATGTGCAGGACCCCTACTACTACGGCCTGCGCGCCCCGCCCCGCGGCCACCGCTGGGTCTACGCCGAC GGCAACTTCGTGCTGATGGCGCTCGCCACCGGGCTGATCGCCGAGGTGGTGTCCAACGGCTGGTGA
Upstream 100 bases:
>100_bases GGAAGCTGAACCGGACCTGACCGGCGAGGTTCAAGGCGGGTTCAGCCGGAGGGCGCGAGGGTGCGGGCGACCAGGGCCAG AACCCGAAAGGACGCACCCG
Downstream 100 bases:
>100_bases GGCGTGAGGAGCCCCCGGGAGACCGGGGGCTCCTTCGTTCTAGGCCGCCTCGAACTCGGCGGCGTGTTCGCGGAAGGGCT TCATCTGCGCGTCCAGGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD GNFVLMALATGLIAEVVSNGW
Sequences:
>Translated_181_residues MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD GNFVLMALATGLIAEVVSNGW >Mature_181_residues MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVTPRERRAIERDRQDVREARRE LRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMRSYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYAD GNFVLMALATGLIAEVVSNGW
Specific function: Unknown
COG id: COG5455
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21664; Mature: 21664
Theoretical pI: Translated: 10.77; Mature: 10.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVT CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRERRAIERDRQDVREARRELRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHH SYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYADGNFVLMALATGLIAEVVSNG HHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC W C >Mature Secondary Structure MKKSLLVAVAVLTAAGPIATSAAMAQPRDREVRESRRELREERRELRDERHDARRDGVVT CCHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC PRERRAIERDRQDVREARRELRFDRRRAETWRDRAEWRAYRGDRQGYWYAPGYGYRPYMR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCHHHH SYAWRRGAYVPRAYRSYYVQDPYYYGLRAPPRGHRWVYADGNFVLMALATGLIAEVVSNG HHHHHCCCCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCC W C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA