Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

Click here to switch to the map view.

The map label for this gene is 197106018

Identifier: 197106018

GI number: 197106018

Start: 2937154

End: 2939037

Strand: Direct

Name: 197106018

Synonym: PHZ_c2557

Alternate gene names: NA

Gene position: 2937154-2939037 (Clockwise)

Preceding gene: 197106006

Following gene: 197106020

Centisome position: 73.5

GC content: 70.65

Gene sequence:

>1884_bases
ATGAGTCCGCATAAGCCCAAGGTGCGCGCGCTGCCGATCAGACCGGCGGCGGTGCAGGTCGAACATCGCATCGACGGGTC
CGTGGTGCTCGAGCAGACCACGCCGCCGGCCCCGGCTGCGCGATCGATACCGCATCTCTTCGCCGAGCGTGTCGTCCAGT
GCGGAAACAGCACGTTCGTGGCCAAGCGCGAGCGGCTGGCCGGAGGCGGATGGGGCGAGTGGCGCCGACTGTCCTACGGA
GAAGCGGCGCGGCAGGTGCGGGCGCTCGCCCAGGCGCTGCTCGACCAAGGCCTGGGGCCCGGCCGCTCGGTCATGATCCT
GTCAGGGCCATCGCCCGAGCACGCCGTGCTCGCCCTGGCGTCCCAGTGGGTGAGCGCCCCCGTCACCGCCGTCGCCACCG
CCTATTCCCTGCTCGCCGACGACTTCGCCAAGCTCCGTCACGTGTTCAATCTCTGCCGCCCCGCCATGATCCTCGTCGAG
GGTCCGGAGTACGCGCGGGCGTTGCAGGCGCTGCCGCTGGCGGGGGTCACCGTCGTGTCCCTACAGCCGATCCCGGGCGT
CCCGACGGCAGCGTTCTCCGATCTCGTCGCGACCCAGCCGACGGCCGCGGTCGAGGACGCGCTCGCCAGGGTCACGGCCG
AAACGGTCGCGCGATACGTCTTCACCTCCGGGTCGACAGGCGCGCCGAAGGCGGTGATCCACACGCAAGGCACGCTCTGC
GCCCAGATCGCCGCGCGCAACGCGCTGCTGGTGGATTCCTCCGCGGAGGCCGGTTCCACCCGGCTCAGCTGGATGCCCTG
GAACCACATCGGCGGGATCATCCACCTCAACTACGCGATCGAGGATGGCGGCTCGTACTACATCGACGAGGGACGTCCGC
TGCCCGGCCAGTTCGCCGAGACCCTGCGCAACCTCCGCGAGGTGATCCCGGCCGAATTCAACTCGGTGCCGATCCTCTAT
GGTCAGCTAGCGGACGCCCTCGAGGAGGACGCCGATCTGCGCACGCGGTTCTTCAAGACCGTGCGCTACTTCTGCTACAG
CAGCGCGGCTCTGTCCGAGGACATCTTCGAACGGATCCAGGCGATGGCGATGGAGACCCTGGGGGAGAGGGTCGCGTTCT
GCACGAAGTACGGCACGACCGAGGTGCAGGCCGTCACCCATTCCGCCCGGCCCATGGAGCGCCCGGGCGAGATCGGCGTC
CCCTACCCCGGCGCGAAGATCAAGCTCGTGCCGTACGGCGACAAGCTTGAGATGCGGGTGAAGGGCGACATGGTGAGCCC
CGGCTATCTCGGAGGCGAGGAGATCAACCGCGAGGCCTTCGACGAGGAGAGCTACTATCGCACGGGCGACGCCGCGGCGT
TCGCCGATACGGCCGATCCGGGCGCCGGGCTCGTCTTCGACGGGCGCGTGACCGAGAACTTCAAGCTCTCGACGGGCACC
TGGGTGTCGGTCGGGGCGCTCCGGGTGGCGCTGATCGAGGCGCTCGCGCCACTTGTGCAGGACGCGGTGATCGCCGGCCA
CGACCGCGACTACATCGCGGTCCTGGCCTGGCCGAAGCTCGATCAGGCGGCGCGGCTGGCGGGCCTGCCGCCCGGCGCGC
CGCTGTCCGACACGCTGGCGACCGAGCCGGTGCGGCGGTTCGTGGCCGAGCGCCTGGCGGCGCACAACGCCCGCTCCCAC
GGCTCGTCGCTGAAGGTCGCGCGCCTCATGCTGCTCGAGGAGCCGCCGGTCGGGGACGAGCAGGCCGAGAAGGGCTACAT
CAACCAACGGGGCGTGCTGAGCCGCCGCGCAGGACTCGTCGCCGACCTCTACGCGGACCCGCCGGGCCCCAAGGTGATCG
TCGTCGGGGCCGAGCAGCCCGCGGCGGCGGCCGCCGTCGGCTGA

Upstream 100 bases:

>100_bases
CGCGAGGGAGTCGAAATAAGAGTTAACTAGGTTAGCGCATGTGCAATACAGTGCGCTGCGCAACGGCGGGAACACGCCGG
CGCCGTCGGGAGGAAGCACC

Downstream 100 bases:

>100_bases
GCGGCGGTGCTCAGTCCCGGCGTCCCGTGGGGATGTCCCGGAACGGCAGATCCCTGTCGACGCGGATGTCGCCGGGCAGC
CCCAGCACGCGTTCGGCGAT

Product: feruloyl-CoA synthase

Products: NA

Alternate protein names: AMP-Dependent Synthetase And Ligase; Acyl-CoA Synthetase; Feruloyl-CoA Synthetase; Long-Chain-Fatty-Acid-CoA Ligase; Long Chain Acyl-CoA Synthetase; Polyketide Synthase Protein; Co A Ligase Long-Chain-Fatty-Acid-CoA Ligase; Acyl-CoA Synthetases / CoA Ligase; Long-Chain Fatty Acid-CoA Ligase; Feruloyl-Coa-Synthetase Protein; Long Chain Fatty Acid CoA Ligase; Co A Ligase

Number of amino acids: Translated: 627; Mature: 626

Protein sequence:

>627_residues
MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYG
EAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVE
GPEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC
AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILY
GQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGV
PYPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT
WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSH
GSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG

Sequences:

>Translated_627_residues
MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYG
EAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVE
GPEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC
AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILY
GQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGV
PYPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT
WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSH
GSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG
>Mature_626_residues
SPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYGE
AARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEG
PEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLCA
QIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILYG
QLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVP
YPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGTW
VSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSHG
SSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67017; Mature: 66886

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00455 AMP_BINDING

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFV
CCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
AKRERLAGGGWGEWRRLSYGEAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALA
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
SQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEGPEYARALQALPLAGVTVVS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEE
LQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC
ECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH
AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAE
HHHHHCCEEEEECCCCCCCCEEEECCHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHH
TLRNLREVIPAEFNSVPILYGQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQ
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVPYPGAKIKLVPYGDKLEMRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
KGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT
ECCCCCCCCCCHHHHCHHHCCCCHHEECCCCCEECCCCCCCCCEEECCEECCCEEECCCC
WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHH
TEPVRRFVAERLAAHNARSHGSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCHHHCCCCCCCCHHHHHCCCE
ADLYADPPGPKVIVVGAEQPAAAAAVG
EEECCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
SPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFV
CCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE
AKRERLAGGGWGEWRRLSYGEAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALA
HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
SQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEGPEYARALQALPLAGVTVVS
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEE
LQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC
ECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH
AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAE
HHHHHCCEEEEECCCCCCCCEEEECCHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHH
TLRNLREVIPAEFNSVPILYGQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQ
HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVPYPGAKIKLVPYGDKLEMRV
HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE
KGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT
ECCCCCCCCCCHHHHCHHHCCCCHHEECCCCCEECCCCCCCCCEEECCEECCCEEECCCC
WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLA
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHH
TEPVRRFVAERLAAHNARSHGSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLV
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCHHHCCCCCCCCHHHHHCCCE
ADLYADPPGPKVIVVGAEQPAAAAAVG
EEECCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA