Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is mer [H]

Identifier: 197106006

GI number: 197106006

Start: 2921036

End: 2922067

Strand: Direct

Name: mer [H]

Synonym: PHZ_c2545

Alternate gene names: 197106006

Gene position: 2921036-2922067 (Clockwise)

Preceding gene: 197105994

Following gene: 197106018

Centisome position: 73.09

GC content: 69.48

Gene sequence:

>1032_bases
ATGAAACTGGCGCTGGGACTGGGGCCGCAGGATGCGCGCTTCAACGTGCCGATCGAGCTGATCCAGAAGGCCGAGGCCCT
GGGGTTCGACTCGGTCTGGACGGCGGAGACCTACGGGGCCGACGCGATGACGCCACTGGCGTTCATCGCGGCGCATACGC
GCAAGATCCGGCTCGGCACCGGGATCGCCCAGCTGGACGCGCGCACGCCCGCCAACCTGGCGATGTGCGCCCAGACGATC
GACGCCCTGGCCGGCGGCGGCCGGATGATCGTGGGCATCGGCGTGTCGGGGCCGCAGATCGTGGAGGGCTGGTACGGCCG
CCCCTGGGGCAAGCCCAATCCCCGCCTGCGCGACACGGTCGCCATCCTGAAGAAGATCTTCCGCCGCGAAAGCCCGGTGT
CCCACGAGGGCAAGGAGATCAGCCTGCCCTACCAAGGCGAGGGGGCCATCGGTCTGGGCAAGCCGCTGAAGGGCATCCTC
CACAGCGGCGACATCCCCGTCTACCTCGGCACTGACACCCCGCTCAACGTGCGCATGACCGGGGAAGTCGCCGACGGCTG
GCTGGGCTTTCACCTCGTGCCGTCGATGGTGAAGCCGTATCGTGCGCTCCTCGAGGAGGGGCTCGCCCGACGGAGCGACG
GCCGGCGCATCGAGGACTTCGACATCCAGGGCGCCGTAGGGGTCAAGGTGAACCCGGACGTGAAGGCGGCGCTGCAGGAG
CCCAAGCCGCACATCGCGCTCTACGCCGGGGGCATGGGCGCCAAGGACAAGAACTTCCACAAGGAAGCCATGGTGAAGCG
CGGCTACGGGGAGGCCGCCGAGCGGATCCAGGAGCTGTTCCTGGCCGGCCGCAAGGAGGAAGCCGCCGCCGCGGTTCCCG
ACGATTACGTGGACGAGGAGTGGCTGGTGGGGCCGCCGGAACGCATCCGGGAGCGCTTCAAGCTGTGGCGGGATTCCGGC
ATCACCACGCTCACCATCCGCCGCAGCCCGGCCGAGGTGCTGGAGCTGATCGCCGACGCGGCGTTCGCCTGA

Upstream 100 bases:

>100_bases
AACGCTTCGGCTCATCGGTCCCTCCCACGCCAATGCGGCGTCTTCAACCGCGCCGCGCCGTATCGTATAACTCATCATAC
TAATTAAAAGGGGAACAGGG

Downstream 100 bases:

>100_bases
ACGGCCGGGGGGGCGCGGCCCCGCCGCGCCCCCTTCCTGCTCAACGGAACATGTACTCGATGCTGACGCCGTATCGCCGC
GGTGGGGCCAGGATGCCGAT

Product: 5,10-methylenetetrahydromethanopterin reductase

Products: NA

Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI
DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL
HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE
PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG
ITTLTIRRSPAEVLELIADAAFA

Sequences:

>Translated_343_residues
MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI
DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL
HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE
PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG
ITTLTIRRSPAEVLELIADAAFA
>Mature_343_residues
MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI
DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL
HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE
PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG
ITTLTIRRSPAEVLELIADAAFA

Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mer family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011251
- InterPro:   IPR016048
- InterPro:   IPR019946 [H]

Pfam domain/function: PF00296 Bac_luciferase [H]

EC number: =1.5.99.11 [H]

Molecular weight: Translated: 37291; Mature: 37291

Theoretical pI: Translated: 7.75; Mature: 7.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGT
CEEEECCCCCCCEECCCHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHCEEEEECC
GIAQLDARTPANLAMCAQTIDALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTV
CHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHH
AILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGILHSGDIPVYLGTDTPLNVRMT
HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEEEE
GEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCC
PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEE
CCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WLVGPPERIRERFKLWRDSGITTLTIRRSPAEVLELIADAAFA
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGT
CEEEECCCCCCCEECCCHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHCEEEEECC
GIAQLDARTPANLAMCAQTIDALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTV
CHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHH
AILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGILHSGDIPVYLGTDTPLNVRMT
HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEEEE
GEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCC
PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEE
CCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
WLVGPPERIRERFKLWRDSGITTLTIRRSPAEVLELIADAAFA
CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]