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The map label for this gene is dgoT [H]

Identifier: 197106017

GI number: 197106017

Start: 2935607

End: 2936944

Strand: Reverse

Name: dgoT [H]

Synonym: PHZ_c2556

Alternate gene names: 197106017

Gene position: 2936944-2935607 (Counterclockwise)

Preceding gene: 197106019

Following gene: 197106016

Centisome position: 73.49

GC content: 68.98

Gene sequence:

>1338_bases
GTGACGGCGGCAGCGGCTAGGGCGATACGGACTGGAGCTCCGCTAGGCGCGTGGCTGGCGCTGGCTGTGCTGGTGCTGCT
GTACCTGCTGAACACGCTGGACCGGGGCGTCCTTGCCCTGGTGGTCGATCCGGTGAAGGCCGACCTGGCCATCAGCGACT
TCCAGATGAGCATGTTGCTCGGGCTCGCCTTCGCCCTGTTCTACGCTCTCTGCGGCCTGCCTATCGGCTGGCTCGTGGAC
CGGTTCCCCCGGCGGATCATCCTGTATCTGGGCGTGACCTTCTGGTCGATCGCGACGATCGCCTGCGGCATGGCTCAGAG
CTTCCCCCAGCTCCTGCTGGCCCGCATGGCCTTGGGCGTCGGAGAGGCGACCCTGGGCCCCTGCGCGCATTCGATCATCG
CCGACAAGTTCCCGAAGCATCAGATGGCGACGGCCCTGTCGATCTACACGGCCGGAGCGGTGCTCGGCACCGGCGCCTCG
ATGGCGGTGGGCGGCCTGGCCGTCGCCTATTTCACCCAGCGTCCCGATCTGAGTTTCCCGTTCTTCGGCGACCTTCGCCC
CTGGCAGATGGTGTTCGTCGCCATCGGCCTGCCAGGCCTCATCCTGGCGACGCTCGTGTTCACGTTCCGCGAGCCGCAGC
GCCTTCATCAGCGGGAGGAAGTCCCGACGCGCCTGCTGCCGTTCCTGCGCGAGCGACGGGCCGTGCTGCTCGGCTACGCT
GGCAGCTTCGCGCTGTTTTCGATGCTGATCTATGGCGCCCTGGCATGGCTCCCGGCGTACATGGAGCGCGCCTTCGGCTG
GGGACCCGCCGAGGTCGGGCCGGCGCTCGGCCTTGTGAACGTCCTCAGCGCCGGCATCGGCACCATAGGCGCCGGCTGGC
TGGTCGACCGGCTCATCGCGCGCGGTCACAGCGATGCTCACCTGCAGGTCTTCTCCGCCAGCGTGCTGCTGGCGACGCCC
GTCGGGATCGGCGCCTTCCTCGTAGACGATCCGCGCGTGTTCCTGGTCTGCGTGTTCCTGCTGAAGATGATGGCGTTCTC
GTACATCGGCTACGGGGCGGCGGCGGTCCAGGCCGTGACGCCGTCGGCGCTGCGGGGGCGCATGGCGGCCATCTACCTTC
TCTCCCTCGCGATCATCGGCAACGCCGGAGGGCCGTCGCTGATCGCCTTCTTCACCGACTTCGTGTTCGGCGACCCCGCG
AAATTGGGCTGGTCCATCGCCACCGCCCTGGCCCTGCTGGCGCCGCTGGCGCTGATTTCCGCGCAGCTGGGGCGCGCGCC
GATGCGCCTGGCCGTCGAGCGGCTGCGGGGCGAGGAGGCGAGCAAGGCCGATGGCTGA

Upstream 100 bases:

>100_bases
CAATCGTCCAGGTCAAACATATAACCACGTTGACTAAGTAAGATTGAGGAGTGAAGGTCCCGATGCGGCTGTCAGGTCGC
ACGCGGAGACGGGAGCGGTC

Downstream 100 bases:

>100_bases
TCCGATGGCGCTCTTGAGGCTCGACGGGCAGGTGGCGGTGGTCACCGGCTCGACGCGCGGCATCGGCCTGGCGACTGCCC
GCCTGCTGGGCCGCGCCGGC

Product: permease of the major facilitator superfamily

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 445; Mature: 444

Protein sequence:

>445_residues
MTAAAARAIRTGAPLGAWLALAVLVLLYLLNTLDRGVLALVVDPVKADLAISDFQMSMLLGLAFALFYALCGLPIGWLVD
RFPRRIILYLGVTFWSIATIACGMAQSFPQLLLARMALGVGEATLGPCAHSIIADKFPKHQMATALSIYTAGAVLGTGAS
MAVGGLAVAYFTQRPDLSFPFFGDLRPWQMVFVAIGLPGLILATLVFTFREPQRLHQREEVPTRLLPFLRERRAVLLGYA
GSFALFSMLIYGALAWLPAYMERAFGWGPAEVGPALGLVNVLSAGIGTIGAGWLVDRLIARGHSDAHLQVFSASVLLATP
VGIGAFLVDDPRVFLVCVFLLKMMAFSYIGYGAAAVQAVTPSALRGRMAAIYLLSLAIIGNAGGPSLIAFFTDFVFGDPA
KLGWSIATALALLAPLALISAQLGRAPMRLAVERLRGEEASKADG

Sequences:

>Translated_445_residues
MTAAAARAIRTGAPLGAWLALAVLVLLYLLNTLDRGVLALVVDPVKADLAISDFQMSMLLGLAFALFYALCGLPIGWLVD
RFPRRIILYLGVTFWSIATIACGMAQSFPQLLLARMALGVGEATLGPCAHSIIADKFPKHQMATALSIYTAGAVLGTGAS
MAVGGLAVAYFTQRPDLSFPFFGDLRPWQMVFVAIGLPGLILATLVFTFREPQRLHQREEVPTRLLPFLRERRAVLLGYA
GSFALFSMLIYGALAWLPAYMERAFGWGPAEVGPALGLVNVLSAGIGTIGAGWLVDRLIARGHSDAHLQVFSASVLLATP
VGIGAFLVDDPRVFLVCVFLLKMMAFSYIGYGAAAVQAVTPSALRGRMAAIYLLSLAIIGNAGGPSLIAFFTDFVFGDPA
KLGWSIATALALLAPLALISAQLGRAPMRLAVERLRGEEASKADG
>Mature_444_residues
TAAAARAIRTGAPLGAWLALAVLVLLYLLNTLDRGVLALVVDPVKADLAISDFQMSMLLGLAFALFYALCGLPIGWLVDR
FPRRIILYLGVTFWSIATIACGMAQSFPQLLLARMALGVGEATLGPCAHSIIADKFPKHQMATALSIYTAGAVLGTGASM
AVGGLAVAYFTQRPDLSFPFFGDLRPWQMVFVAIGLPGLILATLVFTFREPQRLHQREEVPTRLLPFLRERRAVLLGYAG
SFALFSMLIYGALAWLPAYMERAFGWGPAEVGPALGLVNVLSAGIGTIGAGWLVDRLIARGHSDAHLQVFSASVLLATPV
GIGAFLVDDPRVFLVCVFLLKMMAFSYIGYGAAAVQAVTPSALRGRMAAIYLLSLAIIGNAGGPSLIAFFTDFVFGDPAK
LGWSIATALALLAPLALISAQLGRAPMRLAVERLRGEEASKADG

Specific function: Intake of galactonate into the cell [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Phthalate permease family [H]

Homologues:

Organism=Homo sapiens, GI185136021, Length=399, Percent_Identity=25.5639097744361, Blast_Score=75, Evalue=9e-14,
Organism=Homo sapiens, GI215490102, Length=142, Percent_Identity=33.8028169014084, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI215490096, Length=142, Percent_Identity=33.8028169014084, Blast_Score=67, Evalue=5e-11,
Organism=Homo sapiens, GI14042968, Length=142, Percent_Identity=33.8028169014084, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI87082320, Length=439, Percent_Identity=25.2847380410023, Blast_Score=104, Evalue=1e-23,
Organism=Escherichia coli, GI2367379, Length=303, Percent_Identity=27.0627062706271, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI1789515, Length=228, Percent_Identity=25.8771929824561, Blast_Score=66, Evalue=5e-12,
Organism=Escherichia coli, GI87082231, Length=142, Percent_Identity=28.8732394366197, Blast_Score=62, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17557872, Length=427, Percent_Identity=24.5901639344262, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193209775, Length=482, Percent_Identity=22.6141078838174, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17539092, Length=418, Percent_Identity=24.8803827751196, Blast_Score=66, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24654037, Length=388, Percent_Identity=22.680412371134, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24654041, Length=388, Percent_Identity=22.680412371134, Blast_Score=78, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17864456, Length=259, Percent_Identity=24.3243243243243, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24654039, Length=259, Percent_Identity=24.3243243243243, Blast_Score=74, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24654044, Length=259, Percent_Identity=24.3243243243243, Blast_Score=74, Evalue=3e-13,
Organism=Drosophila melanogaster, GI24640209, Length=163, Percent_Identity=30.0613496932515, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004744
- InterPro:   IPR000849
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 47270; Mature: 47139

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAARAIRTGAPLGAWLALAVLVLLYLLNTLDRGVLALVVDPVKADLAISDFQMSMLL
CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHH
GLAFALFYALCGLPIGWLVDRFPRRIILYLGVTFWSIATIACGMAQSFPQLLLARMALGV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEATLGPCAHSIIADKFPKHQMATALSIYTAGAVLGTGASMAVGGLAVAYFTQRPDLSFP
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCC
FFGDLRPWQMVFVAIGLPGLILATLVFTFREPQRLHQREEVPTRLLPFLRERRAVLLGYA
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHEEECC
GSFALFSMLIYGALAWLPAYMERAFGWGPAEVGPALGLVNVLSAGIGTIGAGWLVDRLIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHH
RGHSDAHLQVFSASVLLATPVGIGAFLVDDPRVFLVCVFLLKMMAFSYIGYGAAAVQAVT
CCCCCCEEEHEEHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PSALRGRMAAIYLLSLAIIGNAGGPSLIAFFTDFVFGDPAKLGWSIATALALLAPLALIS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AQLGRAPMRLAVERLRGEEASKADG
HHHCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TAAAARAIRTGAPLGAWLALAVLVLLYLLNTLDRGVLALVVDPVKADLAISDFQMSMLL
CCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHH
GLAFALFYALCGLPIGWLVDRFPRRIILYLGVTFWSIATIACGMAQSFPQLLLARMALGV
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
GEATLGPCAHSIIADKFPKHQMATALSIYTAGAVLGTGASMAVGGLAVAYFTQRPDLSFP
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEECCCCCCCC
FFGDLRPWQMVFVAIGLPGLILATLVFTFREPQRLHQREEVPTRLLPFLRERRAVLLGYA
CCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCHHEEECC
GSFALFSMLIYGALAWLPAYMERAFGWGPAEVGPALGLVNVLSAGIGTIGAGWLVDRLIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHH
RGHSDAHLQVFSASVLLATPVGIGAFLVDDPRVFLVCVFLLKMMAFSYIGYGAAAVQAVT
CCCCCCEEEHEEHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCC
PSALRGRMAAIYLLSLAIIGNAGGPSLIAFFTDFVFGDPAKLGWSIATALALLAPLALIS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
AQLGRAPMRLAVERLRGEEASKADG
HHHCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]