| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is yajO [H]
Identifier: 197106009
GI number: 197106009
Start: 2925163
End: 2926224
Strand: Reverse
Name: yajO [H]
Synonym: PHZ_c2548
Alternate gene names: 197106009
Gene position: 2926224-2925163 (Counterclockwise)
Preceding gene: 197106010
Following gene: 197106008
Centisome position: 73.22
GC content: 70.43
Gene sequence:
>1062_bases ATGCGGTACGCGCTTCTCGGAGGGAGCGGGCTTGTCGTGTCTCGCCTGGCGTTCGGGGCGATGACCTTCGGCGGCCCCTC ACGCTACGGCCTCGGCAAGGTGGACGCCCAAGGCGCCCAGGCGATGGTGGGCGCGGCCCTGGATGCCGGGATCAACCTGT TCGACACCGCCGACGTGTACAACGAAGGGCAGTCCGAGACCCTCCTGGGGGAGGCGCTTCGCGGGTGCCGCGAAGAGGCG CTGATCGCCACAAAGGTCGGCGCCAAGGTGGGGGACGGGCTGCTGGACTGCCGGCTCTCGGCCCATCACATCCACCGCAG CATCGACGGCAGCCTGCGGCGCCTGGGGACCGACTGGGTGGATGTCTACATCTGCCACCGGCCCGACTTTCTGACCCCGC TGGAGGAGACCCTGGCCGCGCTGGACCAGGTGATCCGCGCCGGCAAGGCCCGCTACATCGGCTTCTCGAACTGGCCGGCG TGGCTCGCCGCCAGGGCCATCGAAATCCAGAAGCGCGAGGGCTGGTCCAGGTTCGTCGTCGCCCAGATGTACTATTCCCT GGTCGGCCGCGACGTGGAGGCGGAGGTGGTTCCCTGCGCGCTCGCCAGCGACGTCGGTCTGATGGTCTGGAGCCCACTGG CGGCGGGGTTCCTGAGCGGCAAGTACACCGATGCGGATCCGTCCGGCGGCGGCGGTCGGTTGGCCACGCGAACCTCGTTC TCCGTCGGCGCTACGGCCGAAGCGCGCGCCAGGTGGAGCCCCATCCTGGAGGCCCAGCACCGCATCGCCCGGGCCCGAGG CGTTCCGCCCGCGACCGTGGCGCTCGCCTGGGTGGGCCAGCGCCCCGCAGTGTCCACGGTCCTCCTGGGCGCAACGCGCC CGGAACAGTTGGCCGACAATCTCAGGGCGGCGGACTTCACGCTCTCCGAGGCGGAGATGGCCGAACTGGAGCACCTCTCC CGCCCGGAGTCGCGCTATCCCCAGACCTTCCTGCCGCGCGTGTACGAGGACCCCGCCTATCACGTCGTCGGCCGGGTTCC GGAACCCTATGCCAGGGACTGA
Upstream 100 bases:
>100_bases TACGAGGCCGCCGCCATGGCGATCGCCGTGACCGGCCACGAGTCCCGCGAAGGCGTCGCGGCCTTCCTGGAGAAGCGCCC GCCGAGGTTCAGCTAGGGCC
Downstream 100 bases:
>100_bases AAGCCAAGGGCAGGCGCCGGACCGGGGTGTCTGCATCCGTCCGGTGCGGGGACTGCCGCTTCTCGCGCCCGGCGACGACC TCGCCGCCCTGCTGGCGGCC
Product: aldo/keto reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MRYALLGGSGLVVSRLAFGAMTFGGPSRYGLGKVDAQGAQAMVGAALDAGINLFDTADVYNEGQSETLLGEALRGCREEA LIATKVGAKVGDGLLDCRLSAHHIHRSIDGSLRRLGTDWVDVYICHRPDFLTPLEETLAALDQVIRAGKARYIGFSNWPA WLAARAIEIQKREGWSRFVVAQMYYSLVGRDVEAEVVPCALASDVGLMVWSPLAAGFLSGKYTDADPSGGGGRLATRTSF SVGATAEARARWSPILEAQHRIARARGVPPATVALAWVGQRPAVSTVLLGATRPEQLADNLRAADFTLSEAEMAELEHLS RPESRYPQTFLPRVYEDPAYHVVGRVPEPYARD
Sequences:
>Translated_353_residues MRYALLGGSGLVVSRLAFGAMTFGGPSRYGLGKVDAQGAQAMVGAALDAGINLFDTADVYNEGQSETLLGEALRGCREEA LIATKVGAKVGDGLLDCRLSAHHIHRSIDGSLRRLGTDWVDVYICHRPDFLTPLEETLAALDQVIRAGKARYIGFSNWPA WLAARAIEIQKREGWSRFVVAQMYYSLVGRDVEAEVVPCALASDVGLMVWSPLAAGFLSGKYTDADPSGGGGRLATRTSF SVGATAEARARWSPILEAQHRIARARGVPPATVALAWVGQRPAVSTVLLGATRPEQLADNLRAADFTLSEAEMAELEHLS RPESRYPQTFLPRVYEDPAYHVVGRVPEPYARD >Mature_353_residues MRYALLGGSGLVVSRLAFGAMTFGGPSRYGLGKVDAQGAQAMVGAALDAGINLFDTADVYNEGQSETLLGEALRGCREEA LIATKVGAKVGDGLLDCRLSAHHIHRSIDGSLRRLGTDWVDVYICHRPDFLTPLEETLAALDQVIRAGKARYIGFSNWPA WLAARAIEIQKREGWSRFVVAQMYYSLVGRDVEAEVVPCALASDVGLMVWSPLAAGFLSGKYTDADPSGGGGRLATRTSF SVGATAEARARWSPILEAQHRIARARGVPPATVALAWVGQRPAVSTVLLGATRPEQLADNLRAADFTLSEAEMAELEHLS RPESRYPQTFLPRVYEDPAYHVVGRVPEPYARD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aldo/keto reductase 2 family [H]
Homologues:
Organism=Homo sapiens, GI27436964, Length=307, Percent_Identity=35.1791530944625, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI27436962, Length=307, Percent_Identity=35.1791530944625, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI27436966, Length=307, Percent_Identity=34.8534201954397, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI27436969, Length=333, Percent_Identity=33.3333333333333, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI4504825, Length=331, Percent_Identity=33.2326283987915, Blast_Score=148, Evalue=7e-36, Organism=Homo sapiens, GI223718702, Length=293, Percent_Identity=33.1058020477816, Blast_Score=117, Evalue=1e-26, Organism=Homo sapiens, GI27436971, Length=339, Percent_Identity=30.6784660766962, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI41152114, Length=289, Percent_Identity=32.5259515570934, Blast_Score=113, Evalue=2e-25, Organism=Homo sapiens, GI41327764, Length=293, Percent_Identity=32.0819112627986, Blast_Score=103, Evalue=2e-22, Organism=Homo sapiens, GI223718708, Length=171, Percent_Identity=35.0877192982456, Blast_Score=82, Evalue=9e-16, Organism=Escherichia coli, GI87081735, Length=327, Percent_Identity=41.5902140672783, Blast_Score=221, Evalue=4e-59, Organism=Escherichia coli, GI1788070, Length=342, Percent_Identity=31.8713450292398, Blast_Score=150, Evalue=1e-37, Organism=Escherichia coli, GI1789199, Length=349, Percent_Identity=34.0974212034384, Blast_Score=148, Evalue=6e-37, Organism=Escherichia coli, GI1789375, Length=328, Percent_Identity=31.7073170731707, Blast_Score=138, Evalue=5e-34, Organism=Escherichia coli, GI1788081, Length=273, Percent_Identity=28.9377289377289, Blast_Score=90, Evalue=3e-19, Organism=Escherichia coli, GI1787674, Length=317, Percent_Identity=27.4447949526814, Blast_Score=78, Evalue=1e-15, Organism=Escherichia coli, GI48994888, Length=156, Percent_Identity=32.0512820512821, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI212645785, Length=166, Percent_Identity=33.7349397590361, Blast_Score=74, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6325169, Length=341, Percent_Identity=29.6187683284457, Blast_Score=140, Evalue=4e-34, Organism=Saccharomyces cerevisiae, GI6319958, Length=320, Percent_Identity=28.75, Blast_Score=129, Evalue=6e-31, Organism=Saccharomyces cerevisiae, GI6323998, Length=342, Percent_Identity=28.6549707602339, Blast_Score=128, Evalue=1e-30, Organism=Saccharomyces cerevisiae, GI6319951, Length=334, Percent_Identity=27.2455089820359, Blast_Score=113, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6322615, Length=281, Percent_Identity=27.7580071174377, Blast_Score=109, Evalue=6e-25, Organism=Saccharomyces cerevisiae, GI6321052, Length=156, Percent_Identity=30.1282051282051, Blast_Score=76, Evalue=9e-15, Organism=Drosophila melanogaster, GI24646155, Length=335, Percent_Identity=30.7462686567164, Blast_Score=103, Evalue=1e-22, Organism=Drosophila melanogaster, GI24640980, Length=341, Percent_Identity=28.7390029325513, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI45549126, Length=341, Percent_Identity=28.7390029325513, Blast_Score=97, Evalue=2e-20, Organism=Drosophila melanogaster, GI24646159, Length=222, Percent_Identity=31.981981981982, Blast_Score=81, Evalue=9e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR020471 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 38111; Mature: 38111
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYALLGGSGLVVSRLAFGAMTFGGPSRYGLGKVDAQGAQAMVGAALDAGINLFDTADVY CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHH NEGQSETLLGEALRGCREEALIATKVGAKVGDGLLDCRLSAHHIHRSIDGSLRRLGTDWV CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE DVYICHRPDFLTPLEETLAALDQVIRAGKARYIGFSNWPAWLAARAIEIQKREGWSRFVV EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHH AQMYYSLVGRDVEAEVVPCALASDVGLMVWSPLAAGFLSGKYTDADPSGGGGRLATRTSF HHHHHHHHCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC SVGATAEARARWSPILEAQHRIARARGVPPATVALAWVGQRPAVSTVLLGATRPEQLADN CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHEEEECCCCHHHHHHH LRAADFTLSEAEMAELEHLSRPESRYPQTFLPRVYEDPAYHVVGRVPEPYARD HHHCCCCCCHHHHHHHHHHCCCHHCCCHHHCCHHHCCCCHHEECCCCCCCCCC >Mature Secondary Structure MRYALLGGSGLVVSRLAFGAMTFGGPSRYGLGKVDAQGAQAMVGAALDAGINLFDTADVY CEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECHHHH NEGQSETLLGEALRGCREEALIATKVGAKVGDGLLDCRLSAHHIHRSIDGSLRRLGTDWV CCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE DVYICHRPDFLTPLEETLAALDQVIRAGKARYIGFSNWPAWLAARAIEIQKREGWSRFVV EEEEECCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHH AQMYYSLVGRDVEAEVVPCALASDVGLMVWSPLAAGFLSGKYTDADPSGGGGRLATRTSF HHHHHHHHCCCCCCCEECCHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCC SVGATAEARARWSPILEAQHRIARARGVPPATVALAWVGQRPAVSTVLLGATRPEQLADN CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCHHEEEECCCCHHHHHHH LRAADFTLSEAEMAELEHLSRPESRYPQTFLPRVYEDPAYHVVGRVPEPYARD HHHCCCCCCHHHHHHHHHHCCCHHCCCHHHCCHHHCCCCHHEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]