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The map label for this gene is cofE [H]

Identifier: 197106008

GI number: 197106008

Start: 2924373

End: 2925176

Strand: Reverse

Name: cofE [H]

Synonym: PHZ_c2547

Alternate gene names: 197106008

Gene position: 2925176-2924373 (Counterclockwise)

Preceding gene: 197106009

Following gene: 197106007

Centisome position: 73.2

GC content: 73.51

Gene sequence:

>804_bases
ATGCCAGGGACTGAAAGCCAAGGGCAGGCGCCGGACCGGGGTGTCTGCATCCGTCCGGTGCGGGGACTGCCGCTTCTCGC
GCCCGGCGACGACCTCGCCGCCCTGCTGGCGGCCGGACTCGATCGCGAGGGACTGAGACCCGAGTCCGGCGACGTGCTCG
TCGTGGCGCAGAAGGCCGTGTCCAAGGTCGAGGGGCGCTTCGTGCGCCTGGCGGAGGTGACGCCGTCCGCGCGCGCGATC
GAACTGTCCGCGGCCACCGGTAAGCCCGCGCCTCTGTGCGAGGTGATCCTATCGGAGTCCGTCGAGATCGTGCGCACGCG
CCCGGGACTGGTCATCACTCGCCATCGGACGGGCGTCGTGCTGGCCAACGCCGGTGTCGACGCCTCGAACGTGGCGCCGA
CCGAGGAGCCGGAGACCGTGCTCCTGTGGCCCCTCGACCCCGATGCAAGCGCGCGGCGGCTGCGGGGCGAATTGCAGGCG
CGATACGGCCGCGCCGCCCCCGCCGTCATCGTGAGCGACAGCCTCGGGCGCGCCTGGCGTCTCGGCACTACCGGCCAGGC
GATCGGCGTCGCGGGGCTGGCGCCGACGCGCGACCGCTGCGGCGAACGCGATCTCTTCGGGCGGGTGCTTCAGGCCACGG
TGACCGGCGTCGCCGACGAGATCGCGGCCGCGGCCTCGCTGGTCCTGGGCGAGGGCGACGAGGGAGTGCCGGCCGCGCTC
GTCCGCGGGGCGTCGTGGACCGCGAGCGACGCGGCGGGGCTGCCGGACCTGCTCCGTCCCATTGCTGACGACCTGTTCAA
ATAA

Upstream 100 bases:

>100_bases
GAGCACCTCTCCCGCCCGGAGTCGCGCTATCCCCAGACCTTCCTGCCGCGCGTGTACGAGGACCCCGCCTATCACGTCGT
CGGCCGGGTTCCGGAACCCT

Downstream 100 bases:

>100_bases
GTACAAATAGTTTGACAATTAAAGCTTGGCTGCCAGATTCCGCCTCAACCAGAAAAGAGCAGGGATAGGGAGGAAGGCAT
GCTGAAGTGGAGATTGTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 266

Protein sequence:

>267_residues
MPGTESQGQAPDRGVCIRPVRGLPLLAPGDDLAALLAAGLDREGLRPESGDVLVVAQKAVSKVEGRFVRLAEVTPSARAI
ELSAATGKPAPLCEVILSESVEIVRTRPGLVITRHRTGVVLANAGVDASNVAPTEEPETVLLWPLDPDASARRLRGELQA
RYGRAAPAVIVSDSLGRAWRLGTTGQAIGVAGLAPTRDRCGERDLFGRVLQATVTGVADEIAAAASLVLGEGDEGVPAAL
VRGASWTASDAAGLPDLLRPIADDLFK

Sequences:

>Translated_267_residues
MPGTESQGQAPDRGVCIRPVRGLPLLAPGDDLAALLAAGLDREGLRPESGDVLVVAQKAVSKVEGRFVRLAEVTPSARAI
ELSAATGKPAPLCEVILSESVEIVRTRPGLVITRHRTGVVLANAGVDASNVAPTEEPETVLLWPLDPDASARRLRGELQA
RYGRAAPAVIVSDSLGRAWRLGTTGQAIGVAGLAPTRDRCGERDLFGRVLQATVTGVADEIAAAASLVLGEGDEGVPAAL
VRGASWTASDAAGLPDLLRPIADDLFK
>Mature_266_residues
PGTESQGQAPDRGVCIRPVRGLPLLAPGDDLAALLAAGLDREGLRPESGDVLVVAQKAVSKVEGRFVRLAEVTPSARAIE
LSAATGKPAPLCEVILSESVEIVRTRPGLVITRHRTGVVLANAGVDASNVAPTEEPETVLLWPLDPDASARRLRGELQAR
YGRAAPAVIVSDSLGRAWRLGTTGQAIGVAGLAPTRDRCGERDLFGRVLQATVTGVADEIAAAASLVLGEGDEGVPAALV
RGASWTASDAAGLPDLLRPIADDLFK

Specific function: Catalyzes the GTP-dependent successive addition of multiple gamma-linked L-glutamates to the L-lactyl phosphodiester of 7,8-didemethyl-8-hydroxy-5-deazariboflavin (F420-0) to form polyglutamated F420 derivatives [H]

COG id: COG1478

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CofE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002847
- InterPro:   IPR008225 [H]

Pfam domain/function: PF01996 F420_ligase [H]

EC number: NA

Molecular weight: Translated: 27633; Mature: 27502

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGTESQGQAPDRGVCIRPVRGLPLLAPGDDLAALLAAGLDREGLRPESGDVLVVAQKAV
CCCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHH
SKVEGRFVRLAEVTPSARAIELSAATGKPAPLCEVILSESVEIVRTRPGLVITRHRTGVV
HHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEEEECCCEEE
LANAGVDASNVAPTEEPETVLLWPLDPDASARRLRGELQARYGRAAPAVIVSDSLGRAWR
EEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE
LGTTGQAIGVAGLAPTRDRCGERDLFGRVLQATVTGVADEIAAAASLVLGEGDEGVPAAL
CCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHH
VRGASWTASDAAGLPDLLRPIADDLFK
HCCCCCCCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
PGTESQGQAPDRGVCIRPVRGLPLLAPGDDLAALLAAGLDREGLRPESGDVLVVAQKAV
CCCCCCCCCCCCCEEEECCCCCEEECCCHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHH
SKVEGRFVRLAEVTPSARAIELSAATGKPAPLCEVILSESVEIVRTRPGLVITRHRTGVV
HHHCCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCEEEEECCCEEE
LANAGVDASNVAPTEEPETVLLWPLDPDASARRLRGELQARYGRAAPAVIVSDSLGRAWR
EEECCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEE
LGTTGQAIGVAGLAPTRDRCGERDLFGRVLQATVTGVADEIAAAASLVLGEGDEGVPAAL
CCCCCCEEEECCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCHHH
VRGASWTASDAAGLPDLLRPIADDLFK
HCCCCCCCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9389475 [H]