| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is mer [H]
Identifier: 197106006
GI number: 197106006
Start: 2921036
End: 2922067
Strand: Direct
Name: mer [H]
Synonym: PHZ_c2545
Alternate gene names: 197106006
Gene position: 2921036-2922067 (Clockwise)
Preceding gene: 197105994
Following gene: 197106018
Centisome position: 73.09
GC content: 69.48
Gene sequence:
>1032_bases ATGAAACTGGCGCTGGGACTGGGGCCGCAGGATGCGCGCTTCAACGTGCCGATCGAGCTGATCCAGAAGGCCGAGGCCCT GGGGTTCGACTCGGTCTGGACGGCGGAGACCTACGGGGCCGACGCGATGACGCCACTGGCGTTCATCGCGGCGCATACGC GCAAGATCCGGCTCGGCACCGGGATCGCCCAGCTGGACGCGCGCACGCCCGCCAACCTGGCGATGTGCGCCCAGACGATC GACGCCCTGGCCGGCGGCGGCCGGATGATCGTGGGCATCGGCGTGTCGGGGCCGCAGATCGTGGAGGGCTGGTACGGCCG CCCCTGGGGCAAGCCCAATCCCCGCCTGCGCGACACGGTCGCCATCCTGAAGAAGATCTTCCGCCGCGAAAGCCCGGTGT CCCACGAGGGCAAGGAGATCAGCCTGCCCTACCAAGGCGAGGGGGCCATCGGTCTGGGCAAGCCGCTGAAGGGCATCCTC CACAGCGGCGACATCCCCGTCTACCTCGGCACTGACACCCCGCTCAACGTGCGCATGACCGGGGAAGTCGCCGACGGCTG GCTGGGCTTTCACCTCGTGCCGTCGATGGTGAAGCCGTATCGTGCGCTCCTCGAGGAGGGGCTCGCCCGACGGAGCGACG GCCGGCGCATCGAGGACTTCGACATCCAGGGCGCCGTAGGGGTCAAGGTGAACCCGGACGTGAAGGCGGCGCTGCAGGAG CCCAAGCCGCACATCGCGCTCTACGCCGGGGGCATGGGCGCCAAGGACAAGAACTTCCACAAGGAAGCCATGGTGAAGCG CGGCTACGGGGAGGCCGCCGAGCGGATCCAGGAGCTGTTCCTGGCCGGCCGCAAGGAGGAAGCCGCCGCCGCGGTTCCCG ACGATTACGTGGACGAGGAGTGGCTGGTGGGGCCGCCGGAACGCATCCGGGAGCGCTTCAAGCTGTGGCGGGATTCCGGC ATCACCACGCTCACCATCCGCCGCAGCCCGGCCGAGGTGCTGGAGCTGATCGCCGACGCGGCGTTCGCCTGA
Upstream 100 bases:
>100_bases AACGCTTCGGCTCATCGGTCCCTCCCACGCCAATGCGGCGTCTTCAACCGCGCCGCGCCGTATCGTATAACTCATCATAC TAATTAAAAGGGGAACAGGG
Downstream 100 bases:
>100_bases ACGGCCGGGGGGGCGCGGCCCCGCCGCGCCCCCTTCCTGCTCAACGGAACATGTACTCGATGCTGACGCCGTATCGCCGC GGTGGGGCCAGGATGCCGAT
Product: 5,10-methylenetetrahydromethanopterin reductase
Products: NA
Alternate protein names: Coenzyme F420-dependent N(5),N(10)-methylenetetrahydromethanopterin reductase; Methylene-H(4)MPT reductase [H]
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG ITTLTIRRSPAEVLELIADAAFA
Sequences:
>Translated_343_residues MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG ITTLTIRRSPAEVLELIADAAFA >Mature_343_residues MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGTGIAQLDARTPANLAMCAQTI DALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTVAILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGIL HSGDIPVYLGTDTPLNVRMTGEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEEWLVGPPERIRERFKLWRDSG ITTLTIRRSPAEVLELIADAAFA
Specific function: Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mer family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 - InterPro: IPR019946 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.5.99.11 [H]
Molecular weight: Translated: 37291; Mature: 37291
Theoretical pI: Translated: 7.75; Mature: 7.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGT CEEEECCCCCCCEECCCHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHCEEEEECC GIAQLDARTPANLAMCAQTIDALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTV CHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHH AILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGILHSGDIPVYLGTDTPLNVRMT HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEEEE GEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCC PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEE CCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WLVGPPERIRERFKLWRDSGITTLTIRRSPAEVLELIADAAFA CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC >Mature Secondary Structure MKLALGLGPQDARFNVPIELIQKAEALGFDSVWTAETYGADAMTPLAFIAAHTRKIRLGT CEEEECCCCCCCEECCCHHHHHHHHHCCCCCEECCHHCCCCHHHHHHHHHHHCEEEEECC GIAQLDARTPANLAMCAQTIDALAGGGRMIVGIGVSGPQIVEGWYGRPWGKPNPRLRDTV CHHHHCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCHHHHH AILKKIFRRESPVSHEGKEISLPYQGEGAIGLGKPLKGILHSGDIPVYLGTDTPLNVRMT HHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCCCCCEEECCCCCEEEEEE GEVADGWLGFHLVPSMVKPYRALLEEGLARRSDGRRIEDFDIQGAVGVKVNPDVKAALQE CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCHHHHHCC PKPHIALYAGGMGAKDKNFHKEAMVKRGYGEAAERIQELFLAGRKEEAAAAVPDDYVDEE CCCCEEEEECCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC WLVGPPERIRERFKLWRDSGITTLTIRRSPAEVLELIADAAFA CCCCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]