| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197106018
Identifier: 197106018
GI number: 197106018
Start: 2937154
End: 2939037
Strand: Direct
Name: 197106018
Synonym: PHZ_c2557
Alternate gene names: NA
Gene position: 2937154-2939037 (Clockwise)
Preceding gene: 197106006
Following gene: 197106020
Centisome position: 73.5
GC content: 70.65
Gene sequence:
>1884_bases ATGAGTCCGCATAAGCCCAAGGTGCGCGCGCTGCCGATCAGACCGGCGGCGGTGCAGGTCGAACATCGCATCGACGGGTC CGTGGTGCTCGAGCAGACCACGCCGCCGGCCCCGGCTGCGCGATCGATACCGCATCTCTTCGCCGAGCGTGTCGTCCAGT GCGGAAACAGCACGTTCGTGGCCAAGCGCGAGCGGCTGGCCGGAGGCGGATGGGGCGAGTGGCGCCGACTGTCCTACGGA GAAGCGGCGCGGCAGGTGCGGGCGCTCGCCCAGGCGCTGCTCGACCAAGGCCTGGGGCCCGGCCGCTCGGTCATGATCCT GTCAGGGCCATCGCCCGAGCACGCCGTGCTCGCCCTGGCGTCCCAGTGGGTGAGCGCCCCCGTCACCGCCGTCGCCACCG CCTATTCCCTGCTCGCCGACGACTTCGCCAAGCTCCGTCACGTGTTCAATCTCTGCCGCCCCGCCATGATCCTCGTCGAG GGTCCGGAGTACGCGCGGGCGTTGCAGGCGCTGCCGCTGGCGGGGGTCACCGTCGTGTCCCTACAGCCGATCCCGGGCGT CCCGACGGCAGCGTTCTCCGATCTCGTCGCGACCCAGCCGACGGCCGCGGTCGAGGACGCGCTCGCCAGGGTCACGGCCG AAACGGTCGCGCGATACGTCTTCACCTCCGGGTCGACAGGCGCGCCGAAGGCGGTGATCCACACGCAAGGCACGCTCTGC GCCCAGATCGCCGCGCGCAACGCGCTGCTGGTGGATTCCTCCGCGGAGGCCGGTTCCACCCGGCTCAGCTGGATGCCCTG GAACCACATCGGCGGGATCATCCACCTCAACTACGCGATCGAGGATGGCGGCTCGTACTACATCGACGAGGGACGTCCGC TGCCCGGCCAGTTCGCCGAGACCCTGCGCAACCTCCGCGAGGTGATCCCGGCCGAATTCAACTCGGTGCCGATCCTCTAT GGTCAGCTAGCGGACGCCCTCGAGGAGGACGCCGATCTGCGCACGCGGTTCTTCAAGACCGTGCGCTACTTCTGCTACAG CAGCGCGGCTCTGTCCGAGGACATCTTCGAACGGATCCAGGCGATGGCGATGGAGACCCTGGGGGAGAGGGTCGCGTTCT GCACGAAGTACGGCACGACCGAGGTGCAGGCCGTCACCCATTCCGCCCGGCCCATGGAGCGCCCGGGCGAGATCGGCGTC CCCTACCCCGGCGCGAAGATCAAGCTCGTGCCGTACGGCGACAAGCTTGAGATGCGGGTGAAGGGCGACATGGTGAGCCC CGGCTATCTCGGAGGCGAGGAGATCAACCGCGAGGCCTTCGACGAGGAGAGCTACTATCGCACGGGCGACGCCGCGGCGT TCGCCGATACGGCCGATCCGGGCGCCGGGCTCGTCTTCGACGGGCGCGTGACCGAGAACTTCAAGCTCTCGACGGGCACC TGGGTGTCGGTCGGGGCGCTCCGGGTGGCGCTGATCGAGGCGCTCGCGCCACTTGTGCAGGACGCGGTGATCGCCGGCCA CGACCGCGACTACATCGCGGTCCTGGCCTGGCCGAAGCTCGATCAGGCGGCGCGGCTGGCGGGCCTGCCGCCCGGCGCGC CGCTGTCCGACACGCTGGCGACCGAGCCGGTGCGGCGGTTCGTGGCCGAGCGCCTGGCGGCGCACAACGCCCGCTCCCAC GGCTCGTCGCTGAAGGTCGCGCGCCTCATGCTGCTCGAGGAGCCGCCGGTCGGGGACGAGCAGGCCGAGAAGGGCTACAT CAACCAACGGGGCGTGCTGAGCCGCCGCGCAGGACTCGTCGCCGACCTCTACGCGGACCCGCCGGGCCCCAAGGTGATCG TCGTCGGGGCCGAGCAGCCCGCGGCGGCGGCCGCCGTCGGCTGA
Upstream 100 bases:
>100_bases CGCGAGGGAGTCGAAATAAGAGTTAACTAGGTTAGCGCATGTGCAATACAGTGCGCTGCGCAACGGCGGGAACACGCCGG CGCCGTCGGGAGGAAGCACC
Downstream 100 bases:
>100_bases GCGGCGGTGCTCAGTCCCGGCGTCCCGTGGGGATGTCCCGGAACGGCAGATCCCTGTCGACGCGGATGTCGCCGGGCAGC CCCAGCACGCGTTCGGCGAT
Product: feruloyl-CoA synthase
Products: NA
Alternate protein names: AMP-Dependent Synthetase And Ligase; Acyl-CoA Synthetase; Feruloyl-CoA Synthetase; Long-Chain-Fatty-Acid-CoA Ligase; Long Chain Acyl-CoA Synthetase; Polyketide Synthase Protein; Co A Ligase Long-Chain-Fatty-Acid-CoA Ligase; Acyl-CoA Synthetases / CoA Ligase; Long-Chain Fatty Acid-CoA Ligase; Feruloyl-Coa-Synthetase Protein; Long Chain Fatty Acid CoA Ligase; Co A Ligase
Number of amino acids: Translated: 627; Mature: 626
Protein sequence:
>627_residues MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYG EAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVE GPEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILY GQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGV PYPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSH GSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG
Sequences:
>Translated_627_residues MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYG EAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVE GPEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILY GQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGV PYPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSH GSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG >Mature_626_residues SPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFVAKRERLAGGGWGEWRRLSYGE AARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALASQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEG PEYARALQALPLAGVTVVSLQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLCA QIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAETLRNLREVIPAEFNSVPILYG QLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQAMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVP YPGAKIKLVPYGDKLEMRVKGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGTW VSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLATEPVRRFVAERLAAHNARSHG SSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLVADLYADPPGPKVIVVGAEQPAAAAAVG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67017; Mature: 66886
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFV CCCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE AKRERLAGGGWGEWRRLSYGEAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALA HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH SQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEGPEYARALQALPLAGVTVVS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEE LQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC ECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAE HHHHHCCEEEEECCCCCCCCEEEECCHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHH TLRNLREVIPAEFNSVPILYGQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQ HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVPYPGAKIKLVPYGDKLEMRV HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE KGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT ECCCCCCCCCCHHHHCHHHCCCCHHEECCCCCEECCCCCCCCCEEECCEECCCEEECCCC WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHH TEPVRRFVAERLAAHNARSHGSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCHHHCCCCCCCCHHHHHCCCE ADLYADPPGPKVIVVGAEQPAAAAAVG EEECCCCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure SPHKPKVRALPIRPAAVQVEHRIDGSVVLEQTTPPAPAARSIPHLFAERVVQCGNSTFV CCCCCCEEEECCCCCEEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE AKRERLAGGGWGEWRRLSYGEAARQVRALAQALLDQGLGPGRSVMILSGPSPEHAVLALA HHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH SQWVSAPVTAVATAYSLLADDFAKLRHVFNLCRPAMILVEGPEYARALQALPLAGVTVVS HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHCCCCCEEEEE LQPIPGVPTAAFSDLVATQPTAAVEDALARVTAETVARYVFTSGSTGAPKAVIHTQGTLC ECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEECCCHHH AQIAARNALLVDSSAEAGSTRLSWMPWNHIGGIIHLNYAIEDGGSYYIDEGRPLPGQFAE HHHHHCCEEEEECCCCCCCCEEEECCHHHCCCEEEEEEEEECCCCEEECCCCCCCHHHHH TLRNLREVIPAEFNSVPILYGQLADALEEDADLRTRFFKTVRYFCYSSAALSEDIFERIQ HHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMAMETLGERVAFCTKYGTTEVQAVTHSARPMERPGEIGVPYPGAKIKLVPYGDKLEMRV HHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEE KGDMVSPGYLGGEEINREAFDEESYYRTGDAAAFADTADPGAGLVFDGRVTENFKLSTGT ECCCCCCCCCCHHHHCHHHCCCCHHEECCCCCEECCCCCCCCCEEECCEECCCEEECCCC WVSVGALRVALIEALAPLVQDAVIAGHDRDYIAVLAWPKLDQAARLAGLPPGAPLSDTLA CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHCCCCCCCCCCHHHH TEPVRRFVAERLAAHNARSHGSSLKVARLMLLEEPPVGDEQAEKGYINQRGVLSRRAGLV HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHEECCCCCCCCHHHCCCCCCCCHHHHHCCCE ADLYADPPGPKVIVVGAEQPAAAAAVG EEECCCCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA