| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105956
Identifier: 197105956
GI number: 197105956
Start: 2860481
End: 2861284
Strand: Reverse
Name: 197105956
Synonym: PHZ_c2495
Alternate gene names: NA
Gene position: 2861284-2860481 (Counterclockwise)
Preceding gene: 197105959
Following gene: 197105955
Centisome position: 71.6
GC content: 67.29
Gene sequence:
>804_bases TTGGCGGAACCAGCGACCGAGACCGGCACGCGCCGGCGGCTTCCGCGCCTGCGGGTGCGGCTGCGCGAGCTCTACTACGG CCGCTCGCCGCGCGCGGTGCGCTTCCGGCTGAGCGTCATCGCGCTGGATTTCCTGCTCATCGGCTTCTTCATCGCCTCGC CGTTCCTGCGGGAGTATCCGGCCTATCTCTTCATCGACTATTTCGTCGCCCTGATCCTGGCGCTGGACCTGGCGGCGCGG GCGCTCGCCTATGTGAGCCTGCGCGACTGGCTCCGCCGCCCCAGCGTATGGGTGGACCTCTTCGTGCTGGTCACGCTGCT CTTCCCGCTGTGGCTGTTCAACCTGGCCTTCCTGCGGGTGCTGCGGCTATGGAGCCTGTTCCACAGCGACTTCTTCTGGG AGACGGTCGGTCGCCGCTACGACGACACGCGGTGGGAGGACGTCACCAAGGCGGTGGCCACGCTGGTCACCTTCGTCTTC GTGTCGACGGGCTTCGTCTACGCCAGCTTCGCGCGCGAGCACCCCGGCATCTCGGGCTACCTGGACGCGCTCTATTTCAC CGTCACGGCGCTGACGACGACGGGCTTCGGCGACATCACCCTGCCGGGGGCCTGGGGCAAGCTGCTGGCCATCATCATCA TGATCAGCGGCATCACGCTGTTCGTCCGCCTCGCCCAGACGCTGATCCGTCCGTACAAGGTCCGCTTCACCTGCCCGACG TGCGGCCTGATGCGCCACGACGCCGACGCCGTTCACTGCAAGGCCTGCGGCACGCTGCTGAACATCCCGAACGACGAGGT CTGA
Upstream 100 bases:
>100_bases CATCACTTGTCCTCCAGGCTCAGCCGCGCGAGCCTGCGCGGCCATCGCATGAACCCTCGGCGGGCGCAGGGGGTTCACCG CACCGACGGGAGACCTTTGC
Downstream 100 bases:
>100_bases TCATCCGTCAACGAACTGTCACACGCAGGTGATAGCGCGACGCCAACCGACATCCGGAGCTCCGCCATGCGATTCCCGAT CCTCACCGCCACCGTCGCGC
Product: Ion transport protein
Products: NA
Alternate protein names: Ion Transport 2 Domain Protein; Ion Channel Family; Cation Channel Family Protein; Ion Transporter; Ion Channel; Ion Transport Domain Protein C-Terminal; Ion Channel Family Protein; Voltage-Gated K+ Channel Protein; Ionic Voltage-Gated Channel Protein; Ion Transport 2 Family Protein
Number of amino acids: Translated: 267; Mature: 266
Protein sequence:
>267_residues MAEPATETGTRRRLPRLRVRLRELYYGRSPRAVRFRLSVIALDFLLIGFFIASPFLREYPAYLFIDYFVALILALDLAAR ALAYVSLRDWLRRPSVWVDLFVLVTLLFPLWLFNLAFLRVLRLWSLFHSDFFWETVGRRYDDTRWEDVTKAVATLVTFVF VSTGFVYASFAREHPGISGYLDALYFTVTALTTTGFGDITLPGAWGKLLAIIIMISGITLFVRLAQTLIRPYKVRFTCPT CGLMRHDADAVHCKACGTLLNIPNDEV
Sequences:
>Translated_267_residues MAEPATETGTRRRLPRLRVRLRELYYGRSPRAVRFRLSVIALDFLLIGFFIASPFLREYPAYLFIDYFVALILALDLAAR ALAYVSLRDWLRRPSVWVDLFVLVTLLFPLWLFNLAFLRVLRLWSLFHSDFFWETVGRRYDDTRWEDVTKAVATLVTFVF VSTGFVYASFAREHPGISGYLDALYFTVTALTTTGFGDITLPGAWGKLLAIIIMISGITLFVRLAQTLIRPYKVRFTCPT CGLMRHDADAVHCKACGTLLNIPNDEV >Mature_266_residues AEPATETGTRRRLPRLRVRLRELYYGRSPRAVRFRLSVIALDFLLIGFFIASPFLREYPAYLFIDYFVALILALDLAARA LAYVSLRDWLRRPSVWVDLFVLVTLLFPLWLFNLAFLRVLRLWSLFHSDFFWETVGRRYDDTRWEDVTKAVATLVTFVFV STGFVYASFAREHPGISGYLDALYFTVTALTTTGFGDITLPGAWGKLLAIIIMISGITLFVRLAQTLIRPYKVRFTCPTC GLMRHDADAVHCKACGTLLNIPNDEV
Specific function: Unknown
COG id: COG1226
COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30624; Mature: 30493
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEPATETGTRRRLPRLRVRLRELYYGRSPRAVRFRLSVIALDFLLIGFFIASPFLREYP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH AYLFIDYFVALILALDLAARALAYVSLRDWLRRPSVWVDLFVLVTLLFPLWLFNLAFLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRLWSLFHSDFFWETVGRRYDDTRWEDVTKAVATLVTFVFVSTGFVYASFAREHPGISGY HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LDALYFTVTALTTTGFGDITLPGAWGKLLAIIIMISGITLFVRLAQTLIRPYKVRFTCPT HHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC CGLMRHDADAVHCKACGTLLNIPNDEV CHHHHCCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEPATETGTRRRLPRLRVRLRELYYGRSPRAVRFRLSVIALDFLLIGFFIASPFLREYP CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHH AYLFIDYFVALILALDLAARALAYVSLRDWLRRPSVWVDLFVLVTLLFPLWLFNLAFLRV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH LRLWSLFHSDFFWETVGRRYDDTRWEDVTKAVATLVTFVFVSTGFVYASFAREHPGISGY HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH LDALYFTVTALTTTGFGDITLPGAWGKLLAIIIMISGITLFVRLAQTLIRPYKVRFTCPT HHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCC CGLMRHDADAVHCKACGTLLNIPNDEV CHHHHCCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA