| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is sphX [H]
Identifier: 197105955
GI number: 197105955
Start: 2859329
End: 2860414
Strand: Reverse
Name: sphX [H]
Synonym: PHZ_c2494
Alternate gene names: 197105955
Gene position: 2860414-2859329 (Counterclockwise)
Preceding gene: 197105956
Following gene: 197105951
Centisome position: 71.58
GC content: 70.9
Gene sequence:
>1086_bases ATGCGATTCCCGATCCTCACCGCCACCGTCGCGCTCGCCGCGCTCAGCCTAGCCGCCTGCGGGCAGGGGGGCGGAAGCCC CGCCGGCCAGGGCGCCGCGCCCAAGGGCGGCGCCCAGGGCCAGGTCTGGGCCGCCGGCTCCTCGACCGTCTTCCCGTTCG CGACGCGCGTGGCCGAGACCGTCGCCCGCACCACCGGCGGCGCGCCGGCCAAGGTCGAGAGCCTGGGCACCGGCGGCGGC ATCAAGCTGTTCTGCGGCGGCGCCGGCCGCAACTTCCCCGACGTGGCGAACGCCTCGCGCCGCATGAAGAAGTCAGAGTG GGAGGCCTGCCAGGCCAACGGCGTCACCGACATTCTCGAGGTGAAGATCGGCTACGACGGCATCGTCATCGCCAACGCCA AGAACGCCCCGACCTTCCACCTGACCCGCGAACAGATCTACCGCGCGCTCGCCGCCGAGGTCCCGCAGGGCTCCGGCTTC GCCACCAACACGGCGGCGACCTGGAGCGCCGTCGCGCCCGGGCTGCCGAACGAGCGGATCGTCGCCTACGGCCCGCCGCC GACCTCGGGCACGCGCGACGCCTTCGTCGAACTGGCCATGGAGAAGGGCGCCGAGAAGGTCCCGGCCATGGCCGCACTGA AGTCCTCGGACGAAGAGGCGTTCAAGCAGCGCGCCCACACCCTGCGCAAGGACGGCGCCTGGATCGACGCCGGCGAGAAC GACAACGTCATCGTCCAGACCCTCGAGAAGACCCCGAACGCGGTCGGCGTGTTCGGCTATTCCTTCCTCGAGAACAACAT GGACAAGGTGAAGGCCGCCGACATCGAGGGCGTCTCGCCGACCCTGGAGAACATTTCGACGGGCAAGTACCCGCTGTCGC GTTCGCTCTACATCTACGTGAAGAGGGCGAACATCGGCGTCACGCCGGGCCTGAAGGAGTTCGTGGACGGCTTCCTGTCG GAGGCCGCCGTCGGGCGCGGCGGCTATCTGCTGCAGCGCGGCCTGATCCCGCTGCCGGCCGACGAACTGACCGCCCAGCG CGACGCGGCCAAGGCCCTGACGCCGATGACGGCGCCCGCCTCCTGA
Upstream 100 bases:
>100_bases CACGCTGCTGAACATCCCGAACGACGAGGTCTGATCATCCGTCAACGAACTGTCACACGCAGGTGATAGCGCGACGCCAA CCGACATCCGGAGCTCCGCC
Downstream 100 bases:
>100_bases GGACGGTGCAAGGCTCTGCAGGGGAGGCCCGCCGTTCGGCGGGCCTTTTCTTTTTCGCGGGCGCGCTCGCGAACGCGCGG ATCATCAAATGTACTGATGC
Product: phosphate ABC transporter, periplasmic phosphate-binding protein PstS
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MRFPILTATVALAALSLAACGQGGGSPAGQGAAPKGGAQGQVWAAGSSTVFPFATRVAETVARTTGGAPAKVESLGTGGG IKLFCGGAGRNFPDVANASRRMKKSEWEACQANGVTDILEVKIGYDGIVIANAKNAPTFHLTREQIYRALAAEVPQGSGF ATNTAATWSAVAPGLPNERIVAYGPPPTSGTRDAFVELAMEKGAEKVPAMAALKSSDEEAFKQRAHTLRKDGAWIDAGEN DNVIVQTLEKTPNAVGVFGYSFLENNMDKVKAADIEGVSPTLENISTGKYPLSRSLYIYVKRANIGVTPGLKEFVDGFLS EAAVGRGGYLLQRGLIPLPADELTAQRDAAKALTPMTAPAS
Sequences:
>Translated_361_residues MRFPILTATVALAALSLAACGQGGGSPAGQGAAPKGGAQGQVWAAGSSTVFPFATRVAETVARTTGGAPAKVESLGTGGG IKLFCGGAGRNFPDVANASRRMKKSEWEACQANGVTDILEVKIGYDGIVIANAKNAPTFHLTREQIYRALAAEVPQGSGF ATNTAATWSAVAPGLPNERIVAYGPPPTSGTRDAFVELAMEKGAEKVPAMAALKSSDEEAFKQRAHTLRKDGAWIDAGEN DNVIVQTLEKTPNAVGVFGYSFLENNMDKVKAADIEGVSPTLENISTGKYPLSRSLYIYVKRANIGVTPGLKEFVDGFLS EAAVGRGGYLLQRGLIPLPADELTAQRDAAKALTPMTAPAS >Mature_361_residues MRFPILTATVALAALSLAACGQGGGSPAGQGAAPKGGAQGQVWAAGSSTVFPFATRVAETVARTTGGAPAKVESLGTGGG IKLFCGGAGRNFPDVANASRRMKKSEWEACQANGVTDILEVKIGYDGIVIANAKNAPTFHLTREQIYRALAAEVPQGSGF ATNTAATWSAVAPGLPNERIVAYGPPPTSGTRDAFVELAMEKGAEKVPAMAALKSSDEEAFKQRAHTLRKDGAWIDAGEN DNVIVQTLEKTPNAVGVFGYSFLENNMDKVKAADIEGVSPTLENISTGKYPLSRSLYIYVKRANIGVTPGLKEFVDGFLS EAAVGRGGYLLQRGLIPLPADELTAQRDAAKALTPMTAPAS
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37485; Mature: 37485
Theoretical pI: Translated: 8.43; Mature: 8.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFPILTATVALAALSLAACGQGGGSPAGQGAAPKGGAQGQVWAAGSSTVFPFATRVAET CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH VARTTGGAPAKVESLGTGGGIKLFCGGAGRNFPDVANASRRMKKSEWEACQANGVTDILE HHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE VKIGYDGIVIANAKNAPTFHLTREQIYRALAAEVPQGSGFATNTAATWSAVAPGLPNERI EEECCCEEEEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCE VAYGPPPTSGTRDAFVELAMEKGAEKVPAMAALKSSDEEAFKQRAHTLRKDGAWIDAGEN EEECCCCCCCCHHHHHHHHHHHCCHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCC DNVIVQTLEKTPNAVGVFGYSFLENNMDKVKAADIEGVSPTLENISTGKYPLSRSLYIYV CCEEEEEECCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEE KRANIGVTPGLKEFVDGFLSEAAVGRGGYLLQRGLIPLPADELTAQRDAAKALTPMTAPA EECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC S C >Mature Secondary Structure MRFPILTATVALAALSLAACGQGGGSPAGQGAAPKGGAQGQVWAAGSSTVFPFATRVAET CCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH VARTTGGAPAKVESLGTGGGIKLFCGGAGRNFPDVANASRRMKKSEWEACQANGVTDILE HHHHCCCCCCCHHHCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEE VKIGYDGIVIANAKNAPTFHLTREQIYRALAAEVPQGSGFATNTAATWSAVAPGLPNERI EEECCCEEEEECCCCCCEEEECHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCE VAYGPPPTSGTRDAFVELAMEKGAEKVPAMAALKSSDEEAFKQRAHTLRKDGAWIDAGEN EEECCCCCCCCHHHHHHHHHHHCCHHCCHHHHHHCCCHHHHHHHHHHHHHCCCEEECCCC DNVIVQTLEKTPNAVGVFGYSFLENNMDKVKAADIEGVSPTLENISTGKYPLSRSLYIYV CCEEEEEECCCCCEEEHHHHHHHHCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCEEEEEE KRANIGVTPGLKEFVDGFLSEAAVGRGGYLLQRGLIPLPADELTAQRDAAKALTPMTAPA EECCCCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCC S C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]