| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is uxaA [H]
Identifier: 197105918
GI number: 197105918
Start: 2808956
End: 2810434
Strand: Direct
Name: uxaA [H]
Synonym: PHZ_c2457
Alternate gene names: 197105918
Gene position: 2808956-2810434 (Clockwise)
Preceding gene: 197105916
Following gene: 197105919
Centisome position: 70.29
GC content: 74.17
Gene sequence:
>1479_bases ATGACCGAACCGGCCGACGCCCTGATCATCGACCCGCGCGACGACGTCGCCGTGGCCGTGCGCCCCGTGGCGGCCGGGGA GGAGCTCCTGGGCGTGCGGGCGGCCGCGGACATCCCCGCCGGCCACAAGATGGCGGTCAGGGCCGTCCCCGCTGGCGGCG AGGTGCGCAAGTACGGCTGGCCGATCGGGCGCGCCACCGCCGACATCCGGCCCGGGGACCACGTCCACACCCACAACCTC GCCACGGCCCTCTCGACGCACGAGGACTACGCCTGGCGGCTGGCCCCGGCCGAGCCGCTGCCGGACACCCCCGGGACCTT CCAGGGCTATCGGCGCAAGGACGGGCGGGTCGGCACGCGCAACGAGATCTGGATCCTGTGCACCGTCGGCTGCGTCGCCC GCACGGCCCAGCGCATCGCCGAGCAGGCGCGGCGGCGGTTCGAGGGCCGCGTCGACGGCGTCCACGCCCTGACCCATCCC TTCGGCTGCTCGCAGCTGGGCGGCGACCTCGACGCCACCCGCGCGATGATCGCGGCCCTCGCCGGCCACCCCAACGCGGG CGGCGTGCTGATCCTGGGCCTCGGCTGCGAGAGCAACCAGCTTTCGGCCCTGCTGGAGGCCGCGCCGCACCTCGACCGGG AACGCCTGCGCGCCTTCACCGCCCAGGCCTCGGAGGACGAGCTGGAGGAGGGGCTGAAGGCCGTCGAAGAGCTGGTCGTC GTCGCCGAGGGGGACCGCCGCGAGCCCTGCCCGGTCTCGGATCTGGTGATCGGCGTGAAGTGCGGCGGCTCGGACGGCTT TTCGGGCCTGACCGCCAATCCGCTGGTGGGCCGTATCGCCGACAAGGTCTGCGGGGCGGGCGGTACGGCGGTGCTGACCG AGATTCCCGAGATCTTCGGCGCCGAACAGCTGCTGATGGCGCGGGCCCGGGACGAGGCGGTGTTCCGCGGCCTCGCCGAC GTCGTGAACGACTTCAAGGCCTACTTCACGCGCCACGGAGAGCCGGTCAGCGAGAACCCCTCCCCCGGCAACATCGCGGG CGGCATCACCACCCTGGAGGAGAAGTCGCTGGGCGCCGTCCAGAAGGCGGGCCGCGGGCCCGTCACCGAGGTGGTCCGCT ACGGCGGCCAGGCGCACGAGCCGGGCGTCGTGCTGCTGGAGGCCCCCGGGAACGACGCGGTCTCCTCCACCGCCCTGACC GCGGCGGGCGCGACCGTGATCCTGTTCACCACCGGCCGGGGCACGCCGCTGGGCTTCCCCGCCCCCACCCTGAAGATCGC CACCAACTCGGGCCTCGCCCAGCGCAAGCCGCACTGGATCGACTTCGACGCCGGCCGCATCGCCGCCGGCGAGAGCCTGG ACGCCGCCGCCGACCGGCTGATGGACCTGGTGCTGGCCACCGCGAGCGGCCGGCCGACCCAGGCCGAGGAGAACGGCGAA CGCGAGATCGCCCTCTGGAAACGCGGGGTCACCCTGTGA
Upstream 100 bases:
>100_bases TAATCGCAAGCGCGGGAGATTCAAAATCCGGGTTTGTACGGATCGCACGGAATGCGACGCCGCCGCTTGAGCTTTTGATG ACACCGGTTACCATTTTGCG
Downstream 100 bases:
>100_bases AGCGCCTCTCCGACGCGACGCTGGCCCAGGCCGGCGCGCCCGTGCTCACGCCGGCCTACGACCGAACGACCCTGCGCACC GGCGTGGTCCACTTCGGCCC
Product: altronate hydrolase
Products: NA
Alternate protein names: Altronic acid hydratase [H]
Number of amino acids: Translated: 492; Mature: 491
Protein sequence:
>492_residues MTEPADALIIDPRDDVAVAVRPVAAGEELLGVRAAADIPAGHKMAVRAVPAGGEVRKYGWPIGRATADIRPGDHVHTHNL ATALSTHEDYAWRLAPAEPLPDTPGTFQGYRRKDGRVGTRNEIWILCTVGCVARTAQRIAEQARRRFEGRVDGVHALTHP FGCSQLGGDLDATRAMIAALAGHPNAGGVLILGLGCESNQLSALLEAAPHLDRERLRAFTAQASEDELEEGLKAVEELVV VAEGDRREPCPVSDLVIGVKCGGSDGFSGLTANPLVGRIADKVCGAGGTAVLTEIPEIFGAEQLLMARARDEAVFRGLAD VVNDFKAYFTRHGEPVSENPSPGNIAGGITTLEEKSLGAVQKAGRGPVTEVVRYGGQAHEPGVVLLEAPGNDAVSSTALT AAGATVILFTTGRGTPLGFPAPTLKIATNSGLAQRKPHWIDFDAGRIAAGESLDAAADRLMDLVLATASGRPTQAEENGE REIALWKRGVTL
Sequences:
>Translated_492_residues MTEPADALIIDPRDDVAVAVRPVAAGEELLGVRAAADIPAGHKMAVRAVPAGGEVRKYGWPIGRATADIRPGDHVHTHNL ATALSTHEDYAWRLAPAEPLPDTPGTFQGYRRKDGRVGTRNEIWILCTVGCVARTAQRIAEQARRRFEGRVDGVHALTHP FGCSQLGGDLDATRAMIAALAGHPNAGGVLILGLGCESNQLSALLEAAPHLDRERLRAFTAQASEDELEEGLKAVEELVV VAEGDRREPCPVSDLVIGVKCGGSDGFSGLTANPLVGRIADKVCGAGGTAVLTEIPEIFGAEQLLMARARDEAVFRGLAD VVNDFKAYFTRHGEPVSENPSPGNIAGGITTLEEKSLGAVQKAGRGPVTEVVRYGGQAHEPGVVLLEAPGNDAVSSTALT AAGATVILFTTGRGTPLGFPAPTLKIATNSGLAQRKPHWIDFDAGRIAAGESLDAAADRLMDLVLATASGRPTQAEENGE REIALWKRGVTL >Mature_491_residues TEPADALIIDPRDDVAVAVRPVAAGEELLGVRAAADIPAGHKMAVRAVPAGGEVRKYGWPIGRATADIRPGDHVHTHNLA TALSTHEDYAWRLAPAEPLPDTPGTFQGYRRKDGRVGTRNEIWILCTVGCVARTAQRIAEQARRRFEGRVDGVHALTHPF GCSQLGGDLDATRAMIAALAGHPNAGGVLILGLGCESNQLSALLEAAPHLDRERLRAFTAQASEDELEEGLKAVEELVVV AEGDRREPCPVSDLVIGVKCGGSDGFSGLTANPLVGRIADKVCGAGGTAVLTEIPEIFGAEQLLMARARDEAVFRGLADV VNDFKAYFTRHGEPVSENPSPGNIAGGITTLEEKSLGAVQKAGRGPVTEVVRYGGQAHEPGVVLLEAPGNDAVSSTALTA AGATVILFTTGRGTPLGFPAPTLKIATNSGLAQRKPHWIDFDAGRIAAGESLDAAADRLMDLVLATASGRPTQAEENGER EIALWKRGVTL
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG2721
COG function: function code G; Altronate dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uxaA family [H]
Homologues:
Organism=Escherichia coli, GI1789475, Length=499, Percent_Identity=49.0981963927856, Blast_Score=465, Evalue=1e-132, Organism=Escherichia coli, GI1789516, Length=474, Percent_Identity=35.6540084388186, Blast_Score=247, Evalue=1e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007392 - InterPro: IPR013974 [H]
Pfam domain/function: PF04295 GD_AH_C; PF08666 SAF [H]
EC number: =4.2.1.7 [H]
Molecular weight: Translated: 51612; Mature: 51481
Theoretical pI: Translated: 5.36; Mature: 5.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPADALIIDPRDDVAVAVRPVAAGEELLGVRAAADIPAGHKMAVRAVPAGGEVRKYGW CCCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCC PIGRATADIRPGDHVHTHNLATALSTHEDYAWRLAPAEPLPDTPGTFQGYRRKDGRVGTR CCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCC NEIWILCTVGCVARTAQRIAEQARRRFEGRVDGVHALTHPFGCSQLGGDLDATRAMIAAL CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCHHHHHHHHHHH AGHPNAGGVLILGLGCESNQLSALLEAAPHLDRERLRAFTAQASEDELEEGLKAVEELVV HCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEE VAEGDRREPCPVSDLVIGVKCGGSDGFSGLTANPLVGRIADKVCGAGGTAVLTEIPEIFG EECCCCCCCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHC AEQLLMARARDEAVFRGLADVVNDFKAYFTRHGEPVSENPSPGNIAGGITTLEEKSLGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHH QKAGRGPVTEVVRYGGQAHEPGVVLLEAPGNDAVSSTALTAAGATVILFTTGRGTPLGFP HHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHEECCCEEEEEECCCCCCCCCC APTLKIATNSGLAQRKPHWIDFDAGRIAAGESLDAAADRLMDLVLATASGRPTQAEENGE CCEEEEEECCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC REIALWKRGVTL CEEEEECCCCCC >Mature Secondary Structure TEPADALIIDPRDDVAVAVRPVAAGEELLGVRAAADIPAGHKMAVRAVPAGGEVRKYGW CCCCCEEEECCCCCEEEEEEECCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHCCC PIGRATADIRPGDHVHTHNLATALSTHEDYAWRLAPAEPLPDTPGTFQGYRRKDGRVGTR CCCCCCCCCCCCCCEEHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCHHCCCCCCCCC NEIWILCTVGCVARTAQRIAEQARRRFEGRVDGVHALTHPFGCSQLGGDLDATRAMIAAL CCEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHCCCHHHHHHHHHHH AGHPNAGGVLILGLGCESNQLSALLEAAPHLDRERLRAFTAQASEDELEEGLKAVEELVV HCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHEEE VAEGDRREPCPVSDLVIGVKCGGSDGFSGLTANPLVGRIADKVCGAGGTAVLTEIPEIFG EECCCCCCCCCHHHEEEEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHC AEQLLMARARDEAVFRGLADVVNDFKAYFTRHGEPVSENPSPGNIAGGITTLEEKSLGAV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEHHHHHHHHH QKAGRGPVTEVVRYGGQAHEPGVVLLEAPGNDAVSSTALTAAGATVILFTTGRGTPLGFP HHCCCCCHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHEECCCEEEEEECCCCCCCCCC APTLKIATNSGLAQRKPHWIDFDAGRIAAGESLDAAADRLMDLVLATASGRPTQAEENGE CCEEEEEECCCCCCCCCCEEECCCCCEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC REIALWKRGVTL CEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9278503; 3038546 [H]