| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is uxaC
Identifier: 197105913
GI number: 197105913
Start: 2803543
End: 2804985
Strand: Reverse
Name: uxaC
Synonym: PHZ_c2452
Alternate gene names: 197105913
Gene position: 2804985-2803543 (Counterclockwise)
Preceding gene: 197105917
Following gene: 197105912
Centisome position: 70.19
GC content: 70.69
Gene sequence:
>1443_bases ATGACAAGGCCGCTGAGGCTGCATCCGGACCGCTTGTTCCCGGCCGACGCCGGCACGCGCGACATCGCCCGCCGTCTCTA CGGGTCCGTGAAGGACCTGCCGATCATCAGCCCGCACGGCCACACCGATCCCGAGTGGTTCGCGGGCGACGCGCCGTTCC CCGACGCAACCAACCTGTTCCTGGCCCCCGACCACTACCTCTACCGGATGCTCTATTCGCAGGGCGTGCCCCTGGACCGG CTGGGCGTCCCGTCGAAGGCGGGCCCGTCCCCGGCCGACCCGCGCGAGGCCTGGCGGATGCTGGCGTCCAACATGCACCT GTTCCGCGGCACGCCCTCGTCCATGTGGCTGAACCATGTGTTCGGCGAGGTGTTCGGCTTCGAGATCGAGCTGTCGGCCG AGACCGCCGACCTCTACTTCGACCGCATCGGCGAGGCGCTGCAGAGCCCCGCCTTCCGGCCGCGGGCCCTGTTCGAGCGG TTCAACATCGAACTGCTGGCCACCACCGAGAGCCCCACCGACGACCTGCGCCACCACAAGGCCATGCGCGCCAGCGGCTG GAAGGGCCGGGTGGTCACCGCCTACCGCCCCGACCCGGTGATCGACGCCGAGCACGAGGACTTCCGCGCGAGCCTTTCCC GCTTCGGCGAGCTGACCGGACAGGACGTCGAGAGCTGGTCAGGCTATCTCCAGGCGCACCGGATGCGCCGGGCGGCGTTC ATGGAGATGGGCGCCACCTCCACCGACCACGGCCACCCGACCGCGGCCACCGCCGACCTGTCGCTGGCTGACGCCGAGGC GCTGTTCCGCAAGCTGCTGTCGGCCGACTTCTCGCCCGCCGACGCCGAGCTGTTCCGGGCCCAGATGCTGACCGAGATGG CCAGGATGAGCCTGGACGACGGGCTGGTCATGCAGATCCACCCCGGCTCGTTCCGCAACCACAACGCCGGCCTCTTCGCC CGCTACGGGCGGGACAAGGGCGCCGACATCCCCACCCGGACCGACTACGTCCGGGCGCTGAAGCCGCTGCTGGACCGCTT CGGCAACGAGCGCGGCCTGTCGGTCATCGTCTTCACGCTGGACGAGAGCAGCTACGCCCGCGAGCTCGCGCCGCTGGCCG GCCACTATCCGGTGCTGAAGCTGGGCCCCGCCTGGTGGTTCCACGACAGCCCGGAAGGCATGCGCCGGTTCCGCGAGCAG ACCACCGAGACGGCGGGCTTCTACAACACGGTCGGCTTCAACGACGACACCCGGGCGTTCCTTTCGATCCCGGCCCGGCA TGACGTCGCCCGGCGGATCGACGCCGGCTTCCTCGCCCGGCTGGTGGCCGAGCACCGCCTATCCGAGGACGACGCCCACG AGACGGCGGTCGACCTCGCCTACAACCTGCCCAAGCGGGCCTACAAGCTGGACGAGCCGGCCAGGACGCCGGCCGCCGCC TGA
Upstream 100 bases:
>100_bases TTTCTGCTTCACTCAGGAAAGCCTCGGCAGCCGTCCGGCAAAGAGGTTGCGTGGCGTGATGACACCGGTTACCGAGGCCG CTTCAAGGGAGGACAGGTCG
Downstream 100 bases:
>100_bases CGACAGGAGACGTGTACGTGTTCAAGCGCATCTACCACGCGACCCACCCCGACATGATGGAGGGCGTCGACAACGAGACC CTGCGCCAGCGCTACCTGAT
Product: glucuronate isomerase
Products: NA
Alternate protein names: Glucuronate isomerase; Uronic isomerase
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MTRPLRLHPDRLFPADAGTRDIARRLYGSVKDLPIISPHGHTDPEWFAGDAPFPDATNLFLAPDHYLYRMLYSQGVPLDR LGVPSKAGPSPADPREAWRMLASNMHLFRGTPSSMWLNHVFGEVFGFEIELSAETADLYFDRIGEALQSPAFRPRALFER FNIELLATTESPTDDLRHHKAMRASGWKGRVVTAYRPDPVIDAEHEDFRASLSRFGELTGQDVESWSGYLQAHRMRRAAF MEMGATSTDHGHPTAATADLSLADAEALFRKLLSADFSPADAELFRAQMLTEMARMSLDDGLVMQIHPGSFRNHNAGLFA RYGRDKGADIPTRTDYVRALKPLLDRFGNERGLSVIVFTLDESSYARELAPLAGHYPVLKLGPAWWFHDSPEGMRRFREQ TTETAGFYNTVGFNDDTRAFLSIPARHDVARRIDAGFLARLVAEHRLSEDDAHETAVDLAYNLPKRAYKLDEPARTPAAA
Sequences:
>Translated_480_residues MTRPLRLHPDRLFPADAGTRDIARRLYGSVKDLPIISPHGHTDPEWFAGDAPFPDATNLFLAPDHYLYRMLYSQGVPLDR LGVPSKAGPSPADPREAWRMLASNMHLFRGTPSSMWLNHVFGEVFGFEIELSAETADLYFDRIGEALQSPAFRPRALFER FNIELLATTESPTDDLRHHKAMRASGWKGRVVTAYRPDPVIDAEHEDFRASLSRFGELTGQDVESWSGYLQAHRMRRAAF MEMGATSTDHGHPTAATADLSLADAEALFRKLLSADFSPADAELFRAQMLTEMARMSLDDGLVMQIHPGSFRNHNAGLFA RYGRDKGADIPTRTDYVRALKPLLDRFGNERGLSVIVFTLDESSYARELAPLAGHYPVLKLGPAWWFHDSPEGMRRFREQ TTETAGFYNTVGFNDDTRAFLSIPARHDVARRIDAGFLARLVAEHRLSEDDAHETAVDLAYNLPKRAYKLDEPARTPAAA >Mature_479_residues TRPLRLHPDRLFPADAGTRDIARRLYGSVKDLPIISPHGHTDPEWFAGDAPFPDATNLFLAPDHYLYRMLYSQGVPLDRL GVPSKAGPSPADPREAWRMLASNMHLFRGTPSSMWLNHVFGEVFGFEIELSAETADLYFDRIGEALQSPAFRPRALFERF NIELLATTESPTDDLRHHKAMRASGWKGRVVTAYRPDPVIDAEHEDFRASLSRFGELTGQDVESWSGYLQAHRMRRAAFM EMGATSTDHGHPTAATADLSLADAEALFRKLLSADFSPADAELFRAQMLTEMARMSLDDGLVMQIHPGSFRNHNAGLFAR YGRDKGADIPTRTDYVRALKPLLDRFGNERGLSVIVFTLDESSYARELAPLAGHYPVLKLGPAWWFHDSPEGMRRFREQT TETAGFYNTVGFNDDTRAFLSIPARHDVARRIDAGFLARLVAEHRLSEDDAHETAVDLAYNLPKRAYKLDEPARTPAAA
Specific function: Hexuronate conversion to KDG. [C]
COG id: COG1904
COG function: function code G; Glucuronate isomerase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the uronate isomerase family
Homologues:
Organism=Escherichia coli, GI2367192, Length=433, Percent_Identity=26.7898383371824, Blast_Score=152, Evalue=6e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): UXAC_PHEZH (B4RGF5)
Other databases:
- EMBL: CP000747 - RefSeq: YP_002131290.1 - GeneID: 6791973 - GenomeReviews: CP000747_GR - KEGG: pzu:PHZ_c2452 - HOGENOM: HBG293306 - OMA: AWAKTVP - ProtClustDB: PRK02925 - HAMAP: MF_00675 - InterPro: IPR003766 - InterPro: IPR023177 - Gene3D: G3DSA:1.10.2020.10
Pfam domain/function: PF02614 UxaC
EC number: =5.3.1.12
Molecular weight: Translated: 53883; Mature: 53752
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRPLRLHPDRLFPADAGTRDIARRLYGSVKDLPIISPHGHTDPEWFAGDAPFPDATNLF CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE LAPDHYLYRMLYSQGVPLDRLGVPSKAGPSPADPREAWRMLASNMHLFRGTPSSMWLNHV ECCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHH FGEVFGFEIELSAETADLYFDRIGEALQSPAFRPRALFERFNIELLATTESPTDDLRHHK HHHHHCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHH AMRASGWKGRVVTAYRPDPVIDAEHEDFRASLSRFGELTGQDVESWSGYLQAHRMRRAAF HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MEMGATSTDHGHPTAATADLSLADAEALFRKLLSADFSPADAELFRAQMLTEMARMSLDD HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC GLVMQIHPGSFRNHNAGLFARYGRDKGADIPTRTDYVRALKPLLDRFGNERGLSVIVFTL CEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE DESSYARELAPLAGHYPVLKLGPAWWFHDSPEGMRRFREQTTETAGFYNTVGFNDDTRAF CCCHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEE LSIPARHDVARRIDAGFLARLVAEHRLSEDDAHETAVDLAYNLPKRAYKLDEPARTPAAA EECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC >Mature Secondary Structure TRPLRLHPDRLFPADAGTRDIARRLYGSVKDLPIISPHGHTDPEWFAGDAPFPDATNLF CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCEE LAPDHYLYRMLYSQGVPLDRLGVPSKAGPSPADPREAWRMLASNMHLFRGTPSSMWLNHV ECCHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCEECCCCHHHHHHHH FGEVFGFEIELSAETADLYFDRIGEALQSPAFRPRALFERFNIELLATTESPTDDLRHHK HHHHHCEEEEECCCHHHHHHHHHHHHHHCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHH AMRASGWKGRVVTAYRPDPVIDAEHEDFRASLSRFGELTGQDVESWSGYLQAHRMRRAAF HHHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MEMGATSTDHGHPTAATADLSLADAEALFRKLLSADFSPADAELFRAQMLTEMARMSLDD HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCC GLVMQIHPGSFRNHNAGLFARYGRDKGADIPTRTDYVRALKPLLDRFGNERGLSVIVFTL CEEEEECCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEE DESSYARELAPLAGHYPVLKLGPAWWFHDSPEGMRRFREQTTETAGFYNTVGFNDDTRAF CCCHHHHHHHHHHCCCCEEEECCEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCEE LSIPARHDVARRIDAGFLARLVAEHRLSEDDAHETAVDLAYNLPKRAYKLDEPARTPAAA EECCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA