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The map label for this gene is ycjC [C]

Identifier: 197105901

GI number: 197105901

Start: 2789046

End: 2789666

Strand: Direct

Name: ycjC [C]

Synonym: PHZ_c2440

Alternate gene names: 197105901

Gene position: 2789046-2789666 (Clockwise)

Preceding gene: 197105893

Following gene: 197105902

Centisome position: 69.79

GC content: 62.48

Gene sequence:

>621_bases
ATGCGTGACAGCAGCAAACCTGCGCCCCGCCGCGAGAGCGGACGGGGGCGTCGGAAGGACCGGATCAATATCGGGCCAGC
GGTCCGAGTCCGGCGAAAGGAGCTGGGGCTCACGCTGAAGGAGCTGGCTGAGCGCTCTGGTCTGTCGGTCGCATTCATCT
CGCAGATCGAGCGAGGGAAGACGGCTCCCTCGATCATTTCGCTGCTTCAGATCTCCGATGCGCTCGGCGTCGGTGTGAAC
CACTTCGTCGAAGCCACTCAGGAAGAAAAACTGATCCGTCGGGGGCGGGACCCGGAGTTCATCGATGTCGACTCACCGAC
CACCTATATCCGGCTCAGCAATTCGTTCCCCGAACAGAAGCTCGAGCCACTGATCTTCATCCTCCAGCCTGGCTACATCT
CCGAGGCGGCGAACATCGGTGAAGGACATCTGGGCGAGGGCTTCCTGTACGTCCTCGAGGGGCGTGTATCGGGGGAGTAC
CGGGGGGCTTCGTTCAGCCTCTCCCCCGGCGACAGCATGCACTATCAGCTCACCAGCTCGCTCGCGCTGAGCAATCCTGG
CAAGCGCGAGGCGAAGCTGCTCTGGGTCGGCTCTGTCGTGCTGTTCTCCTCCAATGGCTGA

Upstream 100 bases:

>100_bases
CTACTGCCGGGTGGCGAGCGCGACTCACCGCCGGTTGACACCGTCCGCGAGCCGCTACACTTTACTAGAAATTATGCTAT
ACGAGACGAGTAGGGGCGGA

Downstream 100 bases:

>100_bases
GCTGGCGCGCCTTTCAGGTCTGACGCCTGACGCCGGGTACCCCACCGCTCTGCGCGGATGGTTCGCGGTCGCGATGCTCA
CGGTCGTCTACGTCTTTTCG

Product: transcriptional regulator, Cro/CI family

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator XRE Family; Cupin 2 Domain-Containing Protein; Transcriptional Regulator Cro/CI Family; MerR Family Transcriptional Regulator; Cupin 2 Conserved Barrel Domain Protein; Cro/CI Family Transcriptional Regulator; Transcriptional Regulator XRE Family With Cupin Sensor; Transcriptional Regulator MerR Family; Cupin 2 Conserved Barrel Domain-Containing Protein; Regulatory Protein; Helix-Turn-Helix Transcriptional Regulator PuuR; Cupin Domain Protein; HTH-Type Transcriptional Regulator YdcN; Epoxidase; Transcriptional Regulator Merr Family; Transcriptional Regulator XRE Family Protein; Helix-Turn-Helix Transcriptional Regulator; Transcriptional Regulator Xre Familiy; Helix-Turn-Helix Protein; Transcriptional Regulator Xre Family; Transcription Regulator; XRE Family-Like Protein

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MRDSSKPAPRRESGRGRRKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGVGVN
HFVEATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISEAANIGEGHLGEGFLYVLEGRVSGEY
RGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLWVGSVVLFSSNG

Sequences:

>Translated_206_residues
MRDSSKPAPRRESGRGRRKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGVGVN
HFVEATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISEAANIGEGHLGEGFLYVLEGRVSGEY
RGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLWVGSVVLFSSNG
>Mature_206_residues
MRDSSKPAPRRESGRGRRKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGKTAPSIISLLQISDALGVGVN
HFVEATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQKLEPLIFILQPGYISEAANIGEGHLGEGFLYVLEGRVSGEY
RGASFSLSPGDSMHYQLTSSLALSNPGKREAKLLWVGSVVLFSSNG

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22639; Mature: 22639

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDSSKPAPRRESGRGRRKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHHHHHHHCCCEEHHHHHHHCCC
TAPSIISLLQISDALGVGVNHFVEATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCC
LEPLIFILQPGYISEAANIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSS
CCCEEEEECCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEECH
LALSNPGKREAKLLWVGSVVLFSSNG
HCCCCCCCCCEEEEEEEEEEEEECCC
>Mature Secondary Structure
MRDSSKPAPRRESGRGRRKDRINIGPAVRVRRKELGLTLKELAERSGLSVAFISQIERGK
CCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHHCCCHHHHHHHCCCEEHHHHHHHCCC
TAPSIISLLQISDALGVGVNHFVEATQEEKLIRRGRDPEFIDVDSPTTYIRLSNSFPEQK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCC
LEPLIFILQPGYISEAANIGEGHLGEGFLYVLEGRVSGEYRGASFSLSPGDSMHYQLTSS
CCCEEEEECCCCHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCEEEECCCCCEEEEEECH
LALSNPGKREAKLLWVGSVVLFSSNG
HCCCCCCCCCEEEEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA