Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105890

Identifier: 197105890

GI number: 197105890

Start: 2770842

End: 2773196

Strand: Reverse

Name: 197105890

Synonym: PHZ_c2429

Alternate gene names: NA

Gene position: 2773196-2770842 (Counterclockwise)

Preceding gene: 197105891

Following gene: 197105889

Centisome position: 69.39

GC content: 68.07

Gene sequence:

>2355_bases
ATGACCATCGCGCGTGTCTACGACTTGAGACCTGCCCAGGTCAGCTGGACGGACACGCTTGGCGATCCGCCGGAGGGCGC
CTGGCGGCGTCTCGAGCGCAGGCTGCTTGGTGGGGGCCGGTGGAAGCCGGCGCAGGTCGAGAGTCTCGCCTCTGAATCTG
CGCGCGTGCTGCGGCACCTGCCGGATCCGAGGCAGACCAGCGCATTCCAGGGGCGCGGGCTCGTGGTGGGCTACGTGCAG
AGCGGCAAGACCGCCAACTACACGGCGGTCGCAGCCCGCGCCGTCGACGCTGGCTACCGCCTGGTGATCGTGCTTTCGGG
CATTCACGACGCCCTTCGCAATCAGACCCAGGTGCGGCTCGAAGAAGAGCTTGTCGGCGTCGATGAACCCGGCGGGCCGC
GCTGGCGTCTGCTGACCACGCGCGAGGGCGACTTCCGCGAACCCGAGGAAGATGTGCTGGCCGACGACGGCGCCTTCCTG
ATCGTGGCCAAGAAGAACGTACCCGTCCTGAAGCGCCTGGATGGGTGGCTCGAGGCGGTCGCGTCGCGCCTGCAGGGCGT
GCCCGTGCTGCTCATCGACGATGAAGCGGATCAGGCTTCGATCAACACGCGGGCCAATCGGGCGCCTGACCCCTCCCTGG
ATTCAGAGGGGACCACGGCGGCGCCAAGCGGCGCCGGACCCAGCGCGACGAACGCCCTCATCCGCTCGATGCTTGGACGT
GCCCCACAGGCCGCCTACGTGGCCTACACCGCCACGCCGTTCGCGAACATCTTCATCGATCCCGACGCAGTCGATCGAGA
CGTCGGCGAAGACCTGTTTCCACGCGACTTCGCCCTGCAGCTGCCTCGCCCGGAAGGCTACACCGGGACGGAGGAGCTGT
TCGGGGTCTCCGCTCAGGGACGAGACGTTTTCCGGCGGGTGCCGGACGAGGACGTCAGCGCGCTTCGGCAGGCGACCACT
CGCCGGAGCGCAAGGCCCGTTACGGTGCGCGCCGAAGAGCAGCTGCTGCCGAACTCGCTGACCGACGCCATTCTGGCCTT
CTGCCTCGCAGGGGCGATCCGGGAAGGACGTCCTGGGCTTCAGGGCAAGCCGCACACGATGCTGGTTCACGTGAGCGTGC
GGGTTGAAGACCAGACCCAGGTGCGCGCCGCGATTGAGGCCCAGGTGGATCTCTGGCTCGAGGCGATGCGCCAGGGCCAC
GACCTGACCGCGTTGTTCGTCGAAGCGCTCGAAACCCATTTCCGGGGTGTGTCGACCCCCCTGGACCCGCAGGCCACGGC
GCAGGCGGCGATCTCAGTGCTGCGGAGTCTCGACGTCCTGGAGCTCAACAGCGTCACGGGGGAAAACCTCGAATACGACA
CACGTCCGGCGCGGCACATCATCGCCGTGGGCGGGAACCGGCTGTCGCGCGGCCTGACCCTGGAAGGCCTGACGGTCTCG
TACTTCCTCAGAACTGCGTCGATGGCTGACACCCTGCTCCAGATGGCGCGGTGGTACGGCTTCCGCACAGGCTACGAGGA
TCTGATCAGGATCTGGACGACCGACGGGATCGCGCAGTGGTTCACTGAGCTGGCGCTCGTTGAAGAGAGCCTGCGGGACA
GCCTCCAGGCTCTCTATCGCGCCGGCCGCAGGCCCTCCGAGATGGCCATTCGCCTGCGCTCGCACAGCGCGCTCCTGCTG
ACGGCGAAGAACAAGGCCGCCATGGCCGAGACCCTGACCCTCTCGTGGTCGGGCGAGCATCCGCAGACCGTGATTCTGCC
GCTGCATGACCACACCCGGCTGGAGACCAATCGACGGCTCGCCGACCGCCTCATCGGGCTCTGCGGGCCTGGACGCGAGG
TCGCCGGCGGACAGCTGTTCCGGGATCTTCCTCCCGAGACCGTGGCCGACTTTCTGCGGCTCTTCCAGGCTCATCCCGAT
GCAGTGGCGATGCGAGGGGAGGCGATCGCCGACTGGATCATCCAGCGCGCCGCGGAGGGCGAACTGGTGGACTGGTCCGT
GCTGCTGGCGTCGGCCCAGCGCGGGACCGAGGTGCGCATCGGGGGTATCTCCACCCGCGTCGTCACCCGCAGCCGGATCA
GCAGCGAGGCGATCGGCATCCTCATCGATCCGCGGCACGAAGGCGCCGACCTTCCCGGGGGACCGGACGCCTATGTTCGC
GCCTCGGGCAACTATGACGCCCAGGCGATGCGGTCCGCCCGGTCTCCCACCCAGGGCCTGCTGATGGTCTACCCCCTCGA
CCCTGAGCCGCTCGGGGTTGAGAACCTCGACGCCGTGATCGGCGTCGCCCTGAGCCTGCCTTACACCTCAGACGGTCAAT
CCAGCGCCATCGTCAATCGCGGCGTCGCCTCATGA

Upstream 100 bases:

>100_bases
TCGCGTCCGACCCGGTGGCGCGAGAGGCGCTGGTCGCCTTCCTGGAGGATCTCGACCGAGTTGACGCCCAGCAGGCGCTG
ATCGACGACGCAGCGGGCGC

Downstream 100 bases:

>100_bases
GCGACTGGATCGAAACCTGGCGCGCGCTTCGCGCGAGCCGGCCCGTCGGGGAAGATCAGGTCGCAACGGCGCCGCTCGTG
CACGCAGGCGTGGAGACTTC

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease Z1 Domain Protein; Endonuclease Z1 Domain; Endonuclease Z1 Domain-Containing Protein; Conserved Hypothethical Protein; Z1 Domain-Containing Protein

Number of amino acids: Translated: 784; Mature: 783

Protein sequence:

>784_residues
MTIARVYDLRPAQVSWTDTLGDPPEGAWRRLERRLLGGGRWKPAQVESLASESARVLRHLPDPRQTSAFQGRGLVVGYVQ
SGKTANYTAVAARAVDAGYRLVIVLSGIHDALRNQTQVRLEEELVGVDEPGGPRWRLLTTREGDFREPEEDVLADDGAFL
IVAKKNVPVLKRLDGWLEAVASRLQGVPVLLIDDEADQASINTRANRAPDPSLDSEGTTAAPSGAGPSATNALIRSMLGR
APQAAYVAYTATPFANIFIDPDAVDRDVGEDLFPRDFALQLPRPEGYTGTEELFGVSAQGRDVFRRVPDEDVSALRQATT
RRSARPVTVRAEEQLLPNSLTDAILAFCLAGAIREGRPGLQGKPHTMLVHVSVRVEDQTQVRAAIEAQVDLWLEAMRQGH
DLTALFVEALETHFRGVSTPLDPQATAQAAISVLRSLDVLELNSVTGENLEYDTRPARHIIAVGGNRLSRGLTLEGLTVS
YFLRTASMADTLLQMARWYGFRTGYEDLIRIWTTDGIAQWFTELALVEESLRDSLQALYRAGRRPSEMAIRLRSHSALLL
TAKNKAAMAETLTLSWSGEHPQTVILPLHDHTRLETNRRLADRLIGLCGPGREVAGGQLFRDLPPETVADFLRLFQAHPD
AVAMRGEAIADWIIQRAAEGELVDWSVLLASAQRGTEVRIGGISTRVVTRSRISSEAIGILIDPRHEGADLPGGPDAYVR
ASGNYDAQAMRSARSPTQGLLMVYPLDPEPLGVENLDAVIGVALSLPYTSDGQSSAIVNRGVAS

Sequences:

>Translated_784_residues
MTIARVYDLRPAQVSWTDTLGDPPEGAWRRLERRLLGGGRWKPAQVESLASESARVLRHLPDPRQTSAFQGRGLVVGYVQ
SGKTANYTAVAARAVDAGYRLVIVLSGIHDALRNQTQVRLEEELVGVDEPGGPRWRLLTTREGDFREPEEDVLADDGAFL
IVAKKNVPVLKRLDGWLEAVASRLQGVPVLLIDDEADQASINTRANRAPDPSLDSEGTTAAPSGAGPSATNALIRSMLGR
APQAAYVAYTATPFANIFIDPDAVDRDVGEDLFPRDFALQLPRPEGYTGTEELFGVSAQGRDVFRRVPDEDVSALRQATT
RRSARPVTVRAEEQLLPNSLTDAILAFCLAGAIREGRPGLQGKPHTMLVHVSVRVEDQTQVRAAIEAQVDLWLEAMRQGH
DLTALFVEALETHFRGVSTPLDPQATAQAAISVLRSLDVLELNSVTGENLEYDTRPARHIIAVGGNRLSRGLTLEGLTVS
YFLRTASMADTLLQMARWYGFRTGYEDLIRIWTTDGIAQWFTELALVEESLRDSLQALYRAGRRPSEMAIRLRSHSALLL
TAKNKAAMAETLTLSWSGEHPQTVILPLHDHTRLETNRRLADRLIGLCGPGREVAGGQLFRDLPPETVADFLRLFQAHPD
AVAMRGEAIADWIIQRAAEGELVDWSVLLASAQRGTEVRIGGISTRVVTRSRISSEAIGILIDPRHEGADLPGGPDAYVR
ASGNYDAQAMRSARSPTQGLLMVYPLDPEPLGVENLDAVIGVALSLPYTSDGQSSAIVNRGVAS
>Mature_783_residues
TIARVYDLRPAQVSWTDTLGDPPEGAWRRLERRLLGGGRWKPAQVESLASESARVLRHLPDPRQTSAFQGRGLVVGYVQS
GKTANYTAVAARAVDAGYRLVIVLSGIHDALRNQTQVRLEEELVGVDEPGGPRWRLLTTREGDFREPEEDVLADDGAFLI
VAKKNVPVLKRLDGWLEAVASRLQGVPVLLIDDEADQASINTRANRAPDPSLDSEGTTAAPSGAGPSATNALIRSMLGRA
PQAAYVAYTATPFANIFIDPDAVDRDVGEDLFPRDFALQLPRPEGYTGTEELFGVSAQGRDVFRRVPDEDVSALRQATTR
RSARPVTVRAEEQLLPNSLTDAILAFCLAGAIREGRPGLQGKPHTMLVHVSVRVEDQTQVRAAIEAQVDLWLEAMRQGHD
LTALFVEALETHFRGVSTPLDPQATAQAAISVLRSLDVLELNSVTGENLEYDTRPARHIIAVGGNRLSRGLTLEGLTVSY
FLRTASMADTLLQMARWYGFRTGYEDLIRIWTTDGIAQWFTELALVEESLRDSLQALYRAGRRPSEMAIRLRSHSALLLT
AKNKAAMAETLTLSWSGEHPQTVILPLHDHTRLETNRRLADRLIGLCGPGREVAGGQLFRDLPPETVADFLRLFQAHPDA
VAMRGEAIADWIIQRAAEGELVDWSVLLASAQRGTEVRIGGISTRVVTRSRISSEAIGILIDPRHEGADLPGGPDAYVRA
SGNYDAQAMRSARSPTQGLLMVYPLDPEPLGVENLDAVIGVALSLPYTSDGQSSAIVNRGVAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 85484; Mature: 85353

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIARVYDLRPAQVSWTDTLGDPPEGAWRRLERRLLGGGRWKPAQVESLASESARVLRHL
CCCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
PDPRQTSAFQGRGLVVGYVQSGKTANYTAVAARAVDAGYRLVIVLSGIHDALRNQTQVRL
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHCCHHHEEE
EEELVGVDEPGGPRWRLLTTREGDFREPEEDVLADDGAFLIVAKKNVPVLKRLDGWLEAV
HHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
ASRLQGVPVLLIDDEADQASINTRANRAPDPSLDSEGTTAAPSGAGPSATNALIRSMLGR
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
APQAAYVAYTATPFANIFIDPDAVDRDVGEDLFPRDFALQLPRPEGYTGTEELFGVSAQG
CCCCEEEEEEECCCEEEEECCCHHCHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCC
RDVFRRVPDEDVSALRQATTRRSARPVTVRAEEQLLPNSLTDAILAFCLAGAIREGRPGL
HHHHHHCCCHHHHHHHHHHHHCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
QGKPHTMLVHVSVRVEDQTQVRAAIEAQVDLWLEAMRQGHDLTALFVEALETHFRGVSTP
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
LDPQATAQAAISVLRSLDVLELNSVTGENLEYDTRPARHIIAVGGNRLSRGLTLEGLTVS
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHCCCCEECCCHHH
YFLRTASMADTLLQMARWYGFRTGYEDLIRIWTTDGIAQWFTELALVEESLRDSLQALYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGRRPSEMAIRLRSHSALLLTAKNKAAMAETLTLSWSGEHPQTVILPLHDHTRLETNRRL
CCCCCHHHEEEEECCCEEEEEECCCHHEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHH
ADRLIGLCGPGREVAGGQLFRDLPPETVADFLRLFQAHPDAVAMRGEAIADWIIQRAAEG
HHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCC
ELVDWSVLLASAQRGTEVRIGGISTRVVTRSRISSEAIGILIDPRHEGADLPGGPDAYVR
CEEEHHHHHHHCCCCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEE
ASGNYDAQAMRSARSPTQGLLMVYPLDPEPLGVENLDAVIGVALSLPYTSDGQSSAIVNR
ECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHC
GVAS
CCCC
>Mature Secondary Structure 
TIARVYDLRPAQVSWTDTLGDPPEGAWRRLERRLLGGGRWKPAQVESLASESARVLRHL
CCEEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHC
PDPRQTSAFQGRGLVVGYVQSGKTANYTAVAARAVDAGYRLVIVLSGIHDALRNQTQVRL
CCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHCCHHHEEE
EEELVGVDEPGGPRWRLLTTREGDFREPEEDVLADDGAFLIVAKKNVPVLKRLDGWLEAV
HHHHCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHH
ASRLQGVPVLLIDDEADQASINTRANRAPDPSLDSEGTTAAPSGAGPSATNALIRSMLGR
HHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
APQAAYVAYTATPFANIFIDPDAVDRDVGEDLFPRDFALQLPRPEGYTGTEELFGVSAQG
CCCCEEEEEEECCCEEEEECCCHHCHHCCCCCCCCCCEEECCCCCCCCCHHHHHCCCCCC
RDVFRRVPDEDVSALRQATTRRSARPVTVRAEEQLLPNSLTDAILAFCLAGAIREGRPGL
HHHHHHCCCHHHHHHHHHHHHCCCCCEEEECHHHHCCCHHHHHHHHHHHHHHHHCCCCCC
QGKPHTMLVHVSVRVEDQTQVRAAIEAQVDLWLEAMRQGHDLTALFVEALETHFRGVSTP
CCCCCEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCC
LDPQATAQAAISVLRSLDVLELNSVTGENLEYDTRPARHIIAVGGNRLSRGLTLEGLTVS
CCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCEEEEECCCHHCCCCEECCCHHH
YFLRTASMADTLLQMARWYGFRTGYEDLIRIWTTDGIAQWFTELALVEESLRDSLQALYR
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGRRPSEMAIRLRSHSALLLTAKNKAAMAETLTLSWSGEHPQTVILPLHDHTRLETNRRL
CCCCCHHHEEEEECCCEEEEEECCCHHEEEEEEEEECCCCCCEEEEECCCCCCHHHHHHH
ADRLIGLCGPGREVAGGQLFRDLPPETVADFLRLFQAHPDAVAMRGEAIADWIIQRAAEG
HHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHCCCC
ELVDWSVLLASAQRGTEVRIGGISTRVVTRSRISSEAIGILIDPRHEGADLPGGPDAYVR
CEEEHHHHHHHCCCCCEEEECCCEEEEHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEE
ASGNYDAQAMRSARSPTQGLLMVYPLDPEPLGVENLDAVIGVALSLPYTSDGQSSAIVNR
ECCCCCHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHC
GVAS
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA