| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105891
Identifier: 197105891
GI number: 197105891
Start: 2773193
End: 2774716
Strand: Reverse
Name: 197105891
Synonym: PHZ_c2430
Alternate gene names: NA
Gene position: 2774716-2773193 (Counterclockwise)
Preceding gene: 197105894
Following gene: 197105890
Centisome position: 69.43
GC content: 70.21
Gene sequence:
>1524_bases ATGACCACGACGCCCCCCGACAGCGCGCCCGAGCCCGAGCCGTCGTCCACGCCATCGGGCCGGCGGCGTCTTCTTCCGGG CGGGACGCGGCTCGCCGAGATCCTCGGCGCCGCGGGTCACACGCTTGTCAGCGCCGTCGCCGATCTGATCGACAACTCCA TCTCCGCCCAGGCGACTGAGATCCACATCACCTTCGGCCAGCCGAATGGCGGCCACGGCCGCTGGATGACGATCCGCGAC AACGGCGTCGGCATGTCGGCTGAAGAGCTCGATGAGGCGCTGCGGATCGGCGGCGCGGCGGATTATGGTCCCCGCAGTCT GGGCAAGTTCGGCTTCGGCCTGAAGGGCGCTTCCTGGTCGCAGGCGCGCCGCTTCAAGGTGATCACGCGGCAGGCTGGCG GTTCGATCCGGCACCTGGGCTGGGATTCCGACGACATGGCGAACTTCGAGGTCGACGAGACCCCGCTCGACGCCTGGGAG CGGGAGGTCGCCGACCCGAAGGAACGCGGCACGGTGGTGCTCTGGAAGGATATGAAGGCGCCGATGGTCGCGCCGGCGGC GCGCGGCGTGCCGCCGTTCGTGGCGGAGATCCAGGATCTGAGCCGCCATCTGGGGCTCGTCTTCCACCGCTTTCTAGACG GCGACGCCCGCGGACGCCCGCCCCTGAAGATCTGGGTCCAGGGGACGGAGGTCGAAAGCAATGGCCCCGCCAGCCATCCT CTGACGGAGCACTACGACGCCAAGACCCTGAAGGTTGAGCACCCGGGGGGCACGGCGGAGGTTCGCGTCGAGCCCATCCT GCTGCCGCATGAGGACGAGCTGCGCGACTATCACGGCGAAGGCTGGCAGGCGGCCGCCGACAAGATCGGCTACTGGGGCA AGCGCAACGAGACCCAGGGGCTCTTTCTCTACCGCAATGATCGCCTGATCCGCTGGGGCGGGTGGCACGACATGTGGGCG ACCATGGACGAAAAGCGGAAGCTCGCCCGGGTGATCCTCGACATTCCGCCGGCGCTCGACGAAGCGTTCAACATCGACAT CTCCAAACAGAGGGTTCAGCTGCCCGCCTTCCTGCAGAAGCAGATCAAGCCCCTCGCGGAGACGGTGCGGAAGGCCAGCC TCGCGAAGTTCGGGCGCAGGCCCGCGCCGCCCCCGGCGCCGCCAGTTCCGCCGGCAGCGCCAGGGCCCGGCGGGCCGGGT GGTCCGGCGCCATCGCCGGGGCCAGGCGGCCCGCCGCCCTCTGGCGGGCCGAGCCCGAACCCATCACCGCCATCCGCGCC GCCGCCGCCGACCCCACAGGTGGTGTTTCGCAGGGTGACGTCGACCAAGTTCGCCTGGCAGCTGGTGGAAGGTCTGACCG GTGAACGGACGCTGCAGGTCAGCGGGCTCAGCCCGGCCCTGGGCGAGCTGGCCGACGCGGTCGCGTCCGACCCGGTGGCG CGAGAGGCGCTGGTCGCCTTCCTGGAGGATCTCGACCGAGTTGACGCCCAGCAGGCGCTGATCGACGACGCAGCGGGCGC ATGA
Upstream 100 bases:
>100_bases CATGATCGCGCTGCAGCACGATGAGGCGCCCAGGATTCACCGACTTCTGGCTGAAGCACGGCCCGACCTGTTCAGCGGCC CTGCTCTTAAGGATCCCAAG
Downstream 100 bases:
>100_bases CCATCGCGCGTGTCTACGACTTGAGACCTGCCCAGGTCAGCTGGACGGACACGCTTGGCGATCCGCCGGAGGGCGCCTGG CGGCGTCTCGAGCGCAGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Hypothethical Protein; Acetate/Butyrate Kinase Domain-Containing Protein; DNA Mismatch Repair; Type II Restriction- System Methylation Subunit
Number of amino acids: Translated: 507; Mature: 506
Protein sequence:
>507_residues MTTTPPDSAPEPEPSSTPSGRRRLLPGGTRLAEILGAAGHTLVSAVADLIDNSISAQATEIHITFGQPNGGHGRWMTIRD NGVGMSAEELDEALRIGGAADYGPRSLGKFGFGLKGASWSQARRFKVITRQAGGSIRHLGWDSDDMANFEVDETPLDAWE REVADPKERGTVVLWKDMKAPMVAPAARGVPPFVAEIQDLSRHLGLVFHRFLDGDARGRPPLKIWVQGTEVESNGPASHP LTEHYDAKTLKVEHPGGTAEVRVEPILLPHEDELRDYHGEGWQAAADKIGYWGKRNETQGLFLYRNDRLIRWGGWHDMWA TMDEKRKLARVILDIPPALDEAFNIDISKQRVQLPAFLQKQIKPLAETVRKASLAKFGRRPAPPPAPPVPPAAPGPGGPG GPAPSPGPGGPPPSGGPSPNPSPPSAPPPPTPQVVFRRVTSTKFAWQLVEGLTGERTLQVSGLSPALGELADAVASDPVA REALVAFLEDLDRVDAQQALIDDAAGA
Sequences:
>Translated_507_residues MTTTPPDSAPEPEPSSTPSGRRRLLPGGTRLAEILGAAGHTLVSAVADLIDNSISAQATEIHITFGQPNGGHGRWMTIRD NGVGMSAEELDEALRIGGAADYGPRSLGKFGFGLKGASWSQARRFKVITRQAGGSIRHLGWDSDDMANFEVDETPLDAWE REVADPKERGTVVLWKDMKAPMVAPAARGVPPFVAEIQDLSRHLGLVFHRFLDGDARGRPPLKIWVQGTEVESNGPASHP LTEHYDAKTLKVEHPGGTAEVRVEPILLPHEDELRDYHGEGWQAAADKIGYWGKRNETQGLFLYRNDRLIRWGGWHDMWA TMDEKRKLARVILDIPPALDEAFNIDISKQRVQLPAFLQKQIKPLAETVRKASLAKFGRRPAPPPAPPVPPAAPGPGGPG GPAPSPGPGGPPPSGGPSPNPSPPSAPPPPTPQVVFRRVTSTKFAWQLVEGLTGERTLQVSGLSPALGELADAVASDPVA REALVAFLEDLDRVDAQQALIDDAAGA >Mature_506_residues TTTPPDSAPEPEPSSTPSGRRRLLPGGTRLAEILGAAGHTLVSAVADLIDNSISAQATEIHITFGQPNGGHGRWMTIRDN GVGMSAEELDEALRIGGAADYGPRSLGKFGFGLKGASWSQARRFKVITRQAGGSIRHLGWDSDDMANFEVDETPLDAWER EVADPKERGTVVLWKDMKAPMVAPAARGVPPFVAEIQDLSRHLGLVFHRFLDGDARGRPPLKIWVQGTEVESNGPASHPL TEHYDAKTLKVEHPGGTAEVRVEPILLPHEDELRDYHGEGWQAAADKIGYWGKRNETQGLFLYRNDRLIRWGGWHDMWAT MDEKRKLARVILDIPPALDEAFNIDISKQRVQLPAFLQKQIKPLAETVRKASLAKFGRRPAPPPAPPVPPAAPGPGGPGG PAPSPGPGGPPPSGGPSPNPSPPSAPPPPTPQVVFRRVTSTKFAWQLVEGLTGERTLQVSGLSPALGELADAVASDPVAR EALVAFLEDLDRVDAQQALIDDAAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54430; Mature: 54299
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTPPDSAPEPEPSSTPSGRRRLLPGGTRLAEILGAAGHTLVSAVADLIDNSISAQATE CCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEE IHITFGQPNGGHGRWMTIRDNGVGMSAEELDEALRIGGAADYGPRSLGKFGFGLKGASWS EEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHH QARRFKVITRQAGGSIRHLGWDSDDMANFEVDETPLDAWEREVADPKERGTVVLWKDMKA HHHHEEEEEHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCEEEEECCCC PMVAPAARGVPPFVAEIQDLSRHLGLVFHRFLDGDARGRPPLKIWVQGTEVESNGPASHP CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECCCCCCCCC LTEHYDAKTLKVEHPGGTAEVRVEPILLPHEDELRDYHGEGWQAAADKIGYWGKRNETQG CCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC LFLYRNDRLIRWGGWHDMWATMDEKRKLARVILDIPPALDEAFNIDISKQRVQLPAFLQK EEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH QIKPLAETVRKASLAKFGRRPAPPPAPPVPPAAPGPGGPGGPAPSPGPGGPPPSGGPSPN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSPPSAPPPPTPQVVFRRVTSTKFAWQLVEGLTGERTLQVSGLSPALGELADAVASDPVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCHHH REALVAFLEDLDRVDAQQALIDDAAGA HHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TTTPPDSAPEPEPSSTPSGRRRLLPGGTRLAEILGAAGHTLVSAVADLIDNSISAQATE CCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCEEEE IHITFGQPNGGHGRWMTIRDNGVGMSAEELDEALRIGGAADYGPRSLGKFGFGLKGASWS EEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCCCHH QARRFKVITRQAGGSIRHLGWDSDDMANFEVDETPLDAWEREVADPKERGTVVLWKDMKA HHHHEEEEEHHCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHCCHHHCCCEEEEECCCC PMVAPAARGVPPFVAEIQDLSRHLGLVFHRFLDGDARGRPPLKIWVQGTEVESNGPASHP CCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECEECCCCCCCCC LTEHYDAKTLKVEHPGGTAEVRVEPILLPHEDELRDYHGEGWQAAADKIGYWGKRNETQG CCCCCCCEEEEEECCCCCEEEEEEEEECCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCCC LFLYRNDRLIRWGGWHDMWATMDEKRKLARVILDIPPALDEAFNIDISKQRVQLPAFLQK EEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHH QIKPLAETVRKASLAKFGRRPAPPPAPPVPPAAPGPGGPGGPAPSPGPGGPPPSGGPSPN HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSPPSAPPPPTPQVVFRRVTSTKFAWQLVEGLTGERTLQVSGLSPALGELADAVASDPVA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHCCHHH REALVAFLEDLDRVDAQQALIDDAAGA HHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA