| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is hyuE [H]
Identifier: 197105870
GI number: 197105870
Start: 2743181
End: 2743924
Strand: Reverse
Name: hyuE [H]
Synonym: PHZ_c2409
Alternate gene names: 197105870
Gene position: 2743924-2743181 (Counterclockwise)
Preceding gene: 197105874
Following gene: 197105869
Centisome position: 68.66
GC content: 64.92
Gene sequence:
>744_bases ATGACGACGATCCACCTCATCACGCCCGTCACGACGAGGGGCATTCGGGACCTGAAGGAAATCGCGCATCTGGAGAGCCC GTCGCTCTCGTTCACCCACTCGCTGCTCGACCGCGGCCCGTCCTCGATCGAAAGCGAGTTCGATGAAGCGCTGGCGGTTC CGGACACGATCGTCAGAGCGATCGAGGCCGAACAGGCGGGCGCTGACGCGATCATCATCGACTGCATGGGTGACCCGGGG CTGAAGGCCGCCCGTGAGGTGGTGAAGATCCCGGTCCTCGGTCCCTCGGAAACCTCGATGCATCTGGCCGCCATGCTCGG TCAGAAGTTCAGCGTCGTCACCGTCCTGAACTCGGTGAAGCCGATGCTGGCCAATCTCGCGCGCGTCTACGGCGTCTACG AGAAGCTGGCTTCCATCCTGGTGGTCGATATCCCCGTGCTGGAGCTCGAACAGCGGTTCGCCGAAGTCCAGAGCGCCCTG GCGAACTCGGCCCTGCAGGCGGTGGAGCGCGACGGCGCCGACGTGATCGTGCTGGGCTGCACGGGCTTCCTCGGCTGCGC TGCGGCGATCGAAGAGCATCTGCAGAGCGCCGGCCATGACATCCCGGTGATCGACCCCATTCCAGCGACCGTCTGTGTCG CCGAGGCCGTGGCCAAGGCCGGGCTTCGCCACAGCAAGCGCACCTACGCCACACCCAGAGCCAAAGAGATCATCGGCTTC AACATTCCAAGGACCGCCGTCTGA
Upstream 100 bases:
>100_bases TACTAAGCAGGGTTGGGCCTCTCCCTAATGCGAATGTTGTTCTGTCGGCCGTCCGCCCGCCAACTGTCCGCACAACAGAC CGGCAGATGCGAGCGCGGCC
Downstream 100 bases:
>100_bases GCGGATCTTCTCGGGGAGGGGACTTCAATCATGAGCAACGTCGTTTCTAAGGGGCGCCTGCTGCTGCTGGCGACCGCCGC CGCCTGCTTGCCTGCGGCGG
Product: Asp/Glu racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTTIHLITPVTTRGIRDLKEIAHLESPSLSFTHSLLDRGPSSIESEFDEALAVPDTIVRAIEAEQAGADAIIIDCMGDPG LKAAREVVKIPVLGPSETSMHLAAMLGQKFSVVTVLNSVKPMLANLARVYGVYEKLASILVVDIPVLELEQRFAEVQSAL ANSALQAVERDGADVIVLGCTGFLGCAAAIEEHLQSAGHDIPVIDPIPATVCVAEAVAKAGLRHSKRTYATPRAKEIIGF NIPRTAV
Sequences:
>Translated_247_residues MTTIHLITPVTTRGIRDLKEIAHLESPSLSFTHSLLDRGPSSIESEFDEALAVPDTIVRAIEAEQAGADAIIIDCMGDPG LKAAREVVKIPVLGPSETSMHLAAMLGQKFSVVTVLNSVKPMLANLARVYGVYEKLASILVVDIPVLELEQRFAEVQSAL ANSALQAVERDGADVIVLGCTGFLGCAAAIEEHLQSAGHDIPVIDPIPATVCVAEAVAKAGLRHSKRTYATPRAKEIIGF NIPRTAV >Mature_246_residues TTIHLITPVTTRGIRDLKEIAHLESPSLSFTHSLLDRGPSSIESEFDEALAVPDTIVRAIEAEQAGADAIIIDCMGDPGL KAAREVVKIPVLGPSETSMHLAAMLGQKFSVVTVLNSVKPMLANLARVYGVYEKLASILVVDIPVLELEQRFAEVQSALA NSALQAVERDGADVIVLGCTGFLGCAAAIEEHLQSAGHDIPVIDPIPATVCVAEAVAKAGLRHSKRTYATPRAKEIIGFN IPRTAV
Specific function: Responsible for racemization of the D-5-substituted hydantoins to their corresponding L-amino acids [H]
COG id: COG4126
COG function: function code E; Hydantoin racemase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To yeast DCG1 and S.pombe SPAC1F7.10 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.99.5 [H]
Molecular weight: Translated: 26219; Mature: 26087
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIHLITPVTTRGIRDLKEIAHLESPSLSFTHSLLDRGPSSIESEFDEALAVPDTIVRA CCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH IEAEQAGADAIIIDCMGDPGLKAAREVVKIPVLGPSETSMHLAAMLGQKFSVVTVLNSVK HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH PMLANLARVYGVYEKLASILVVDIPVLELEQRFAEVQSALANSALQAVERDGADVIVLGC HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC TGFLGCAAAIEEHLQSAGHDIPVIDPIPATVCVAEAVAKAGLRHSKRTYATPRAKEIIGF CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCC NIPRTAV CCCCCCC >Mature Secondary Structure TTIHLITPVTTRGIRDLKEIAHLESPSLSFTHSLLDRGPSSIESEFDEALAVPDTIVRA CEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHH IEAEQAGADAIIIDCMGDPGLKAAREVVKIPVLGPSETSMHLAAMLGQKFSVVTVLNSVK HHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHH PMLANLARVYGVYEKLASILVVDIPVLELEQRFAEVQSALANSALQAVERDGADVIVLGC HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECC TGFLGCAAAIEEHLQSAGHDIPVIDPIPATVCVAEAVAKAGLRHSKRTYATPRAKEIIGF CHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHCC NIPRTAV CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1339422 [H]