Click here to switch to the map view.

The map label for this gene is 197105844

Identifier: 197105844

GI number: 197105844

Start: 2703253

End: 2703510

Strand: Reverse

Name: 197105844

Synonym: PHZ_c2383

Alternate gene names: NA

Gene position: 2703510-2703253 (Counterclockwise)

Preceding gene: 197105849

Following gene: 197105842

Centisome position: 67.65

GC content: 62.4

Gene sequence:

>258_bases
ATGGCCAAGGCCACGACCAACGCGCTGCAGAAGCCTCTCACCCCCTCAGCCGAACTCGCCCAGATCGTCGGCGCCGGTCA
GCTGTCCCGCGGTGAAACCGTCTCGCGCGTGTGGGACTACATCAAGACCAACAGGCTGCAGAACCCGCAGAACAAGCGCG
AGATCGTCGCCGACGCGAAGCTGAAGCCGATCTTCGGCGGCAAGGACCGTGTCTCGATGTTCGAGATGAGCAAGCATCTC
TCCGGGCACCTGAAGTAA

Upstream 100 bases:

>100_bases
CGGAGCCTAGGCGAGGCAGGCCCGCGGACGCAACGCTACGGCCCGGCTTTCCGGCCGCGGCGACTCGCCGAAACCTGCGG
TCTGGACAGGAGACACATCA

Downstream 100 bases:

>100_bases
GATCGCAGCCCACCCGGGCCGGGGGGGGGGGGCGACGCGCCGGCGCGTGTGCGCCGGCGCGTCGCCTCCGGCCGTCTCAG
GCGGCCTGCTCAATGGGCGC

Product: SWIB-domain-containing protein implicated in chromatin remodeling

Products: NA

Alternate protein names: DNA poisomerase III; SWIB/MDM2 Domain Protein; Fused DNA poisomerase I/SWI Domain-Containing Protein; SwiB Complex Protein; SWIB Complex; SWIB/MDM2 Domain Superfamily; DNA poisomerase Domain-Containing Protein; DNA poisomerase I; SWIB Complex Protein

Number of amino acids: Translated: 85; Mature: 84

Protein sequence:

>85_residues
MAKATTNALQKPLTPSAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFGGKDRVSMFEMSKHL
SGHLK

Sequences:

>Translated_85_residues
MAKATTNALQKPLTPSAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFGGKDRVSMFEMSKHL
SGHLK
>Mature_84_residues
AKATTNALQKPLTPSAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAKLKPIFGGKDRVSMFEMSKHLS
GHLK

Specific function: Unknown

COG id: COG5531

COG function: function code B; SWIB-domain-containing proteins implicated in chromatin remodeling

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Saccharomyces cerevisiae, GI6323889, Length=69, Percent_Identity=46.3768115942029, Blast_Score=72, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6324869, Length=74, Percent_Identity=45.945945945946, Blast_Score=71, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9404; Mature: 9273

Theoretical pI: Translated: 10.90; Mature: 10.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKATTNALQKPLTPSAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAK
CCCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCC
LKPIFGGKDRVSMFEMSKHLSGHLK
CCCCCCCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AKATTNALQKPLTPSAELAQIVGAGQLSRGETVSRVWDYIKTNRLQNPQNKREIVADAK
CCCCCHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCC
LKPIFGGKDRVSMFEMSKHLSGHLK
CCCCCCCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA