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The map label for this gene is bkdR [H]

Identifier: 197105842

GI number: 197105842

Start: 2699102

End: 2699581

Strand: Reverse

Name: bkdR [H]

Synonym: PHZ_c2381

Alternate gene names: 197105842

Gene position: 2699581-2699102 (Counterclockwise)

Preceding gene: 197105844

Following gene: 197105839

Centisome position: 67.55

GC content: 63.96

Gene sequence:

>480_bases
ATGGCGACAAAACTCGACGCGATCGACACGCGGATCCTGAATGCGCTCATTCGGGATGGGCGCATCACCTGGAGCGACCT
CGCAGAGGAAGTCGGCCTCTCAGTGACGCCGACAATGCGGCGCGTGCGGCAGATGGAGGAGGCGGGCGTCATCCGTGGAT
ATGGCGCGCATCTCGATGTCACCCGGCTGATCGGCGAGATGCCGGTCTTCGTGTCCGTCACCATGGAGCGGCAGGTTGCA
AGCGCTCTGGCGGGGCTCGAGAGGGCGGTCGCGGATCTGCCCGAGGTGATGAGCGGTCACCTCATGAGCGGCACGCAGGA
TTACCTCCTGCACGCCTATGTCCGTGACATGGAACACTACCGGTCTCTGCTGGACCGGCTGACCCAGATTCCGGGGATCG
CGCACATTCAGTCGAGCTTCGTACTGAACACGTTTCTTGCGCGCGACGCCCCGCTGCTCGAGCCTTCAACGCGGCGCTGA

Upstream 100 bases:

>100_bases
TTGCCCTACGCTCCGCGAGGGTTTCCGACCAAAGTTCTCGCCACCTCGGCCAATCCGTGGTGAAACCCGCCACGTTTCAG
CTTCGGAATAGTTGAAAGTC

Downstream 100 bases:

>100_bases
TCGGCCGGAGGCTCCAGCGTCGCTGGCTTGCGTCAGGCTGCGCTGGTCCTCAGCCGTCGCCGGGCGGCCAGGGCCTCGGT
CAATGCCGAAGCCCACGCAG

Product: transcriptional regulator, AsnC family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MATKLDAIDTRILNALIRDGRITWSDLAEEVGLSVTPTMRRVRQMEEAGVIRGYGAHLDVTRLIGEMPVFVSVTMERQVA
SALAGLERAVADLPEVMSGHLMSGTQDYLLHAYVRDMEHYRSLLDRLTQIPGIAHIQSSFVLNTFLARDAPLLEPSTRR

Sequences:

>Translated_159_residues
MATKLDAIDTRILNALIRDGRITWSDLAEEVGLSVTPTMRRVRQMEEAGVIRGYGAHLDVTRLIGEMPVFVSVTMERQVA
SALAGLERAVADLPEVMSGHLMSGTQDYLLHAYVRDMEHYRSLLDRLTQIPGIAHIQSSFVLNTFLARDAPLLEPSTRR
>Mature_158_residues
ATKLDAIDTRILNALIRDGRITWSDLAEEVGLSVTPTMRRVRQMEEAGVIRGYGAHLDVTRLIGEMPVFVSVTMERQVAS
ALAGLERAVADLPEVMSGHLMSGTQDYLLHAYVRDMEHYRSLLDRLTQIPGIAHIQSSFVLNTFLARDAPLLEPSTRR

Specific function: Positive regulator of the bkd operon for branched-chain keto acid dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=139, Percent_Identity=41.726618705036, Blast_Score=103, Evalue=4e-24,
Organism=Escherichia coli, GI87081742, Length=140, Percent_Identity=30.7142857142857, Blast_Score=79, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17745; Mature: 17614

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATKLDAIDTRILNALIRDGRITWSDLAEEVGLSVTPTMRRVRQMEEAGVIRGYGAHLDV
CCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
TRLIGEMPVFVSVTMERQVASALAGLERAVADLPEVMSGHLMSGTQDYLLHAYVRDMEHY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHH
RSLLDRLTQIPGIAHIQSSFVLNTFLARDAPLLEPSTRR
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ATKLDAIDTRILNALIRDGRITWSDLAEEVGLSVTPTMRRVRQMEEAGVIRGYGAHLDV
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCHHH
TRLIGEMPVFVSVTMERQVASALAGLERAVADLPEVMSGHLMSGTQDYLLHAYVRDMEHY
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHHHHHHHHHHH
RSLLDRLTQIPGIAHIQSSFVLNTFLARDAPLLEPSTRR
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]