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The map label for this gene is yoaB [C]

Identifier: 197105834

GI number: 197105834

Start: 2691212

End: 2691571

Strand: Reverse

Name: yoaB [C]

Synonym: PHZ_c2373

Alternate gene names: 197105834

Gene position: 2691571-2691212 (Counterclockwise)

Preceding gene: 197105835

Following gene: 197105833

Centisome position: 67.35

GC content: 65.83

Gene sequence:

>360_bases
ATGAGCGACATCGAACGGATCGCGACGAATCCTCGGCGGGGCCGCGTCGTGATTCACAATGGGCTCGCCTTCCTGGGCGG
CCAGGCCGCTGATGATCGTAGCGGCGACATTCGTAGCCAGACGGCGCAAGCGCTGGCGAAGGCGGACAAGGCGCTCGCGG
AGGCGGGATCGGACCGCACCCGAATCCTATCGGCGCAGATCTGGCTCAAGGATATCGCGCGCGACTTCGCTGGCATGAAC
GAGGTCTGGGACGGCTGGATGTCGCCCGAGCATGCGCCGGCAAGGGCCACAGCTCAGTGCGAGATGGCAGCGCCGAACGT
CCTGGTCGAGATCACGATGGTGGCGGCGGTGGCCACTTAA

Upstream 100 bases:

>100_bases
AACTTAACAGGCGCTCGACGCGGGACGGCGAAGCGCGCGCGCCGCTCGCCGCCTCCGACGATTAGCCATTCCGCCAGAGA
GCGCAGGACCGGAGACGTAC

Downstream 100 bases:

>100_bases
GCCTCCGTCGCGCGCCCGACACACGACCCGTCCGGCATTCTCCTCCCCGCCGGACGCAGAACTTCGCCCCGGTCGTAACG
GCCGGGGTTCTTTTTAGGCC

Product: translation initiation inhibitor, yjgF family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MSDIERIATNPRRGRVVIHNGLAFLGGQAADDRSGDIRSQTAQALAKADKALAEAGSDRTRILSAQIWLKDIARDFAGMN
EVWDGWMSPEHAPARATAQCEMAAPNVLVEITMVAAVAT

Sequences:

>Translated_119_residues
MSDIERIATNPRRGRVVIHNGLAFLGGQAADDRSGDIRSQTAQALAKADKALAEAGSDRTRILSAQIWLKDIARDFAGMN
EVWDGWMSPEHAPARATAQCEMAAPNVLVEITMVAAVAT
>Mature_118_residues
SDIERIATNPRRGRVVIHNGLAFLGGQAADDRSGDIRSQTAQALAKADKALAEAGSDRTRILSAQIWLKDIARDFAGMNE
VWDGWMSPEHAPARATAQCEMAAPNVLVEITMVAAVAT

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=114, Percent_Identity=42.1052631578947, Blast_Score=84, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12759; Mature: 12627

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDIERIATNPRRGRVVIHNGLAFLGGQAADDRSGDIRSQTAQALAKADKALAEAGSDRT
CCCHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
RILSAQIWLKDIARDFAGMNEVWDGWMSPEHAPARATAQCEMAAPNVLVEITMVAAVAT
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure 
SDIERIATNPRRGRVVIHNGLAFLGGQAADDRSGDIRSQTAQALAKADKALAEAGSDRT
CCHHHHHCCCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHH
RILSAQIWLKDIARDFAGMNEVWDGWMSPEHAPARATAQCEMAAPNVLVEITMVAAVAT
HHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA