| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is virB2
Identifier: 197105810
GI number: 197105810
Start: 2660517
End: 2660816
Strand: Direct
Name: virB2
Synonym: PHZ_c2348
Alternate gene names: NA
Gene position: 2660517-2660816 (Clockwise)
Preceding gene: 197105809
Following gene: 197105811
Centisome position: 66.58
GC content: 66.33
Gene sequence:
>300_bases ATGACTTTCGCCCGCCGGCGCCTGGCGCTCGCCGCCCTGCTTGCGCTCAGCGCCTCCCCCGCCTTCGCTCAATCCACCAG CGTCGGGGGCGATCTCGGCGGCTTCATCCAGAACATCATCGATCTCCTGAACAGCGGCGTCATCCGCGGTCTCGCCGTCC TGGCCGTGATCATCACCGGCATCGCGTGGATGTTCGGCCATCTCGATCTGCGCCGCGCGGGGACCGTCGTGGTCGGGATC ATCGTGATCTTCGGAGCCACAACCATCGTCGATCTGATCACGGGAGGGGCCGGTGCGTAA
Upstream 100 bases:
>100_bases CTGCATCTCCCCCCGCGGCGGCCCCGACGTGGGACGTGTTCGCACGCGCCCGGATCAGGTCCGGCGGCTTTGTGCTCACC CCCTCTTCTGGAGATCTCAG
Downstream 100 bases:
>100_bases CGCCGAGCGCCTGACCGAAGACCCCCTGTTCCTGGCCTGCACCCGGCCTGCCCTGTTCCTCGGGGTTCCGATGGAAGCGG TCGGCGCCAATCTGATCGTC
Product: Type IV secretory pathway, VirB2 components (pilins)
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MTFARRRLALAALLALSASPAFAQSTSVGGDLGGFIQNIIDLLNSGVIRGLAVLAVIITGIAWMFGHLDLRRAGTVVVGI IVIFGATTIVDLITGGAGA
Sequences:
>Translated_99_residues MTFARRRLALAALLALSASPAFAQSTSVGGDLGGFIQNIIDLLNSGVIRGLAVLAVIITGIAWMFGHLDLRRAGTVVVGI IVIFGATTIVDLITGGAGA >Mature_98_residues TFARRRLALAALLALSASPAFAQSTSVGGDLGGFIQNIIDLLNSGVIRGLAVLAVIITGIAWMFGHLDLRRAGTVVVGII VIFGATTIVDLITGGAGA
Specific function: Unknown
COG id: COG3838
COG function: function code U; Type IV secretory pathway, VirB2 components (pilins)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10048; Mature: 9917
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFARRRLALAALLALSASPAFAQSTSVGGDLGGFIQNIIDLLNSGVIRGLAVLAVIITG CCHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH IAWMFGHLDLRRAGTVVVGIIVIFGATTIVDLITGGAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TFARRRLALAALLALSASPAFAQSTSVGGDLGGFIQNIIDLLNSGVIRGLAVLAVIITG CHHHHHHHHHHHHHHHCCCCHHHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH IAWMFGHLDLRRAGTVVVGIIVIFGATTIVDLITGGAGA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA