Definition Phenylobacterium zucineum HLK1, complete genome.
Accession NC_011144
Length 3,996,255

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The map label for this gene is 197105801

Identifier: 197105801

GI number: 197105801

Start: 2652559

End: 2654043

Strand: Reverse

Name: 197105801

Synonym: PHZ_c2339

Alternate gene names: NA

Gene position: 2654043-2652559 (Counterclockwise)

Preceding gene: 197105805

Following gene: 197105799

Centisome position: 66.41

GC content: 71.52

Gene sequence:

>1485_bases
ATGGCAAGGATGCGGATGACGGTCTTCACTCCGGGCGAGACGTGCTGGCGTACGGCCCCGGCCGACCGTGTGGCGTTCCT
GATCGACAACGAGGCCTACTTCACCGCCGCCTTCGAGGCGATCCAGAAGGCCCGGCGCTCGATCCTGCTGCTGGGCTGGG
GCTTCGATCCGCGTACGCGGCTGTTCCCCGACGGCTACGACGGCCCCGCCGACCCGGACGAGGTGGGGCGCATCCTGCTC
CGGCTTTCCGAGGCCCGGCCGGACCTCGACATCCGCCTGCTGATCTGGAAGTCGGCCCTGCCGGTGAGCGCCAGCCAGCA
GTTCTTCCCGCACAAGGCCCGCAGCTGGTTCAAGGGCACCAACATCAAGTTCCGGCTGGACGACCAGGTCCCGTTCGGCG
CCTGCCACCACCAGAAGGTTCTGGTGATCGACGACCGCCTGGCGTTCTGCGGCGGCGGCGACATCTCTGTGGACCGCTGG
GACACCCCCGGCCACCTGGAGGTGGATCCGCGGCGGATCATGCCCAGCCAGAGCTACCACCCCCCGCGCCACGAGGTGAT
GATGATGGTCGACGGCGCCGCGGCCAGGGCGCTGGGCGACCATTTCCGCGAGCGCTGGCGCGCCGCCGAGCCCGAACCGA
TCGAGCCGCCCCCGGACGCCGGGGGCGATCCCTGGCCCGATCACGTGCCGCCGCACATCTTCGGCGCCGAGGTGGCCATC
GCCCGCACCAGTCCGGCCTGGCGCGGCGCGCCGCTGGTCGAGGAGATCAAGGCCCTGACGCTGGAGTGCATCGGCAAGGC
GCGGGACGTGATCTACCTGGAGAACCAGTATTTCACCTCGCCGCTGGTGGCCGAGGCCCTGGCCGCCCGCCTGGCCGAAC
CGGACGGGCCCGAGGTGCTGCTGATCACCACGGGCAAGTCGCCGAGCTGGTTCGACCAGCTGACCATGGACCGGGCGCGC
GGGGCGATCATCTGGCGGCTGCGCGCCGCCGACGTGTTCGGACGCTTCCGGGCGTTCTACCCGACGACCTCGGGCGGCTC
GAACATCATCGTCCACTCCAAGGCCAGCATCTTCGACGACCGAGTGGTCCGGGTGGGCTCGGCGAACCTCAACAACCGCT
CCTTCGGCTTCGACACCGAGATCGAGCTCGGGGTGGAGGCGCAGGAGGAGGCGGCCCGCCTGCACGTCTCGGCGCTGCGG
GATCGCCTGGTGGGCCACTTCCTGGGCGTGACGGGCGACTCGGTGACCAAGGCCCGCGCCGAGCACGGCGGCCTGGTGGG
GGCGGTGGACGCCCTGAACCGCGACGGTCGGCTGGTGCCGGTCGACCCCTCGCGCCGCTCGCACTTCGAGGAGTTCATCG
CCGCCTATCACGTGGGCGACCCCGCGGGCGTGGCCGACTCGTGGCGGCTGGGCCGGCGGCGCGAGCGGCTGTTCGCCGAG
GCGCGCGAGCTCTCCGACCAGGCGCACCGGCAGTCCCAGGGCTAG

Upstream 100 bases:

>100_bases
CGCCCGCCCGGGCGGCGCGCTTTTCTCTTGCGCGGAAGGTCTGCGGAACCCCACCTGAGCCATGGGCTTTCTGGAGCGTG
GCCATGACGGCCGCGGGCTC

Downstream 100 bases:

>100_bases
ACCGGCGGCGCTAGGCCACGTCGAAGTCCATGACCAGGGGCAGGTGGTCCGACGCCACCCGGGTCAGCGGATCGAACGGG
GCGAAGACGTCGTGCACCTC

Product: phospholipase D/transphosphatidylase

Products: NA

Alternate protein names: Phospholipase D; SNARE Associated Golgi Protein; Phospholipase D Family Protein; SNARE Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Related Protein; Phospholipase D Domain Protein; Transmembrane Phospholipase Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase/Transphosphatidylase; Phospholipase D Alpha; Phospholipase Protein; Phospholipase D Active Site Motif Domain Protein; Phospholipase; Phospholipase D Protein; Phospholipase/Phosphatidylserine Synthase; Phospholipase D Superfamily Protein

Number of amino acids: Translated: 494; Mature: 493

Protein sequence:

>494_residues
MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILL
RLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRW
DTPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI
ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRAR
GAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALR
DRLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE
ARELSDQAHRQSQG

Sequences:

>Translated_494_residues
MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILL
RLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRW
DTPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI
ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRAR
GAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALR
DRLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE
ARELSDQAHRQSQG
>Mature_493_residues
ARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILLR
LSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWD
TPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAIA
RTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRARG
AIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRD
RLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAEA
RELSDQAHRQSQG

Specific function: Unknown

COG id: COG1502

COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55042; Mature: 54911

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50035 PLD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTR
CCCEEEEEECCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCC
LFPDGYDGPADPDEVGRILLRLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGT
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHCCHHHHHHHCCC
NIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWDTPGHLEVDPRRIMPSQSYH
CEEEEECCCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCCCEEECHHHCCCCCCCC
PPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI
CCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEE
ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVL
EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE
LITTGKSPSWFDQLTMDRARGAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDD
EEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHEECCCCCCCCEEEEECCCHHCCC
RVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRDRLVGHFLGVTGDSVTKARA
CEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE
HHCCEEEEHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ARELSDQAHRQSQG
HHHHHHHHHHHCCC
>Mature Secondary Structure 
ARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTR
CCEEEEEECCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCC
LFPDGYDGPADPDEVGRILLRLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGT
CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHCCHHHHHHHCCC
NIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWDTPGHLEVDPRRIMPSQSYH
CEEEEECCCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCCCEEECHHHCCCCCCCC
PPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI
CCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEE
ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVL
EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE
LITTGKSPSWFDQLTMDRARGAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDD
EEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHEECCCCCCCCEEEEECCCHHCCC
RVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRDRLVGHFLGVTGDSVTKARA
CEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE
HHCCEEEEHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
ARELSDQAHRQSQG
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA