| Definition | Phenylobacterium zucineum HLK1, complete genome. |
|---|---|
| Accession | NC_011144 |
| Length | 3,996,255 |
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The map label for this gene is 197105801
Identifier: 197105801
GI number: 197105801
Start: 2652559
End: 2654043
Strand: Reverse
Name: 197105801
Synonym: PHZ_c2339
Alternate gene names: NA
Gene position: 2654043-2652559 (Counterclockwise)
Preceding gene: 197105805
Following gene: 197105799
Centisome position: 66.41
GC content: 71.52
Gene sequence:
>1485_bases ATGGCAAGGATGCGGATGACGGTCTTCACTCCGGGCGAGACGTGCTGGCGTACGGCCCCGGCCGACCGTGTGGCGTTCCT GATCGACAACGAGGCCTACTTCACCGCCGCCTTCGAGGCGATCCAGAAGGCCCGGCGCTCGATCCTGCTGCTGGGCTGGG GCTTCGATCCGCGTACGCGGCTGTTCCCCGACGGCTACGACGGCCCCGCCGACCCGGACGAGGTGGGGCGCATCCTGCTC CGGCTTTCCGAGGCCCGGCCGGACCTCGACATCCGCCTGCTGATCTGGAAGTCGGCCCTGCCGGTGAGCGCCAGCCAGCA GTTCTTCCCGCACAAGGCCCGCAGCTGGTTCAAGGGCACCAACATCAAGTTCCGGCTGGACGACCAGGTCCCGTTCGGCG CCTGCCACCACCAGAAGGTTCTGGTGATCGACGACCGCCTGGCGTTCTGCGGCGGCGGCGACATCTCTGTGGACCGCTGG GACACCCCCGGCCACCTGGAGGTGGATCCGCGGCGGATCATGCCCAGCCAGAGCTACCACCCCCCGCGCCACGAGGTGAT GATGATGGTCGACGGCGCCGCGGCCAGGGCGCTGGGCGACCATTTCCGCGAGCGCTGGCGCGCCGCCGAGCCCGAACCGA TCGAGCCGCCCCCGGACGCCGGGGGCGATCCCTGGCCCGATCACGTGCCGCCGCACATCTTCGGCGCCGAGGTGGCCATC GCCCGCACCAGTCCGGCCTGGCGCGGCGCGCCGCTGGTCGAGGAGATCAAGGCCCTGACGCTGGAGTGCATCGGCAAGGC GCGGGACGTGATCTACCTGGAGAACCAGTATTTCACCTCGCCGCTGGTGGCCGAGGCCCTGGCCGCCCGCCTGGCCGAAC CGGACGGGCCCGAGGTGCTGCTGATCACCACGGGCAAGTCGCCGAGCTGGTTCGACCAGCTGACCATGGACCGGGCGCGC GGGGCGATCATCTGGCGGCTGCGCGCCGCCGACGTGTTCGGACGCTTCCGGGCGTTCTACCCGACGACCTCGGGCGGCTC GAACATCATCGTCCACTCCAAGGCCAGCATCTTCGACGACCGAGTGGTCCGGGTGGGCTCGGCGAACCTCAACAACCGCT CCTTCGGCTTCGACACCGAGATCGAGCTCGGGGTGGAGGCGCAGGAGGAGGCGGCCCGCCTGCACGTCTCGGCGCTGCGG GATCGCCTGGTGGGCCACTTCCTGGGCGTGACGGGCGACTCGGTGACCAAGGCCCGCGCCGAGCACGGCGGCCTGGTGGG GGCGGTGGACGCCCTGAACCGCGACGGTCGGCTGGTGCCGGTCGACCCCTCGCGCCGCTCGCACTTCGAGGAGTTCATCG CCGCCTATCACGTGGGCGACCCCGCGGGCGTGGCCGACTCGTGGCGGCTGGGCCGGCGGCGCGAGCGGCTGTTCGCCGAG GCGCGCGAGCTCTCCGACCAGGCGCACCGGCAGTCCCAGGGCTAG
Upstream 100 bases:
>100_bases CGCCCGCCCGGGCGGCGCGCTTTTCTCTTGCGCGGAAGGTCTGCGGAACCCCACCTGAGCCATGGGCTTTCTGGAGCGTG GCCATGACGGCCGCGGGCTC
Downstream 100 bases:
>100_bases ACCGGCGGCGCTAGGCCACGTCGAAGTCCATGACCAGGGGCAGGTGGTCCGACGCCACCCGGGTCAGCGGATCGAACGGG GCGAAGACGTCGTGCACCTC
Product: phospholipase D/transphosphatidylase
Products: NA
Alternate protein names: Phospholipase D; SNARE Associated Golgi Protein; Phospholipase D Family Protein; SNARE Associated Golgi Protein-Like Protein; SNARE Associated Golgi Protein-Related Protein; Phospholipase D Domain Protein; Transmembrane Phospholipase Protein; SNARE Associated Golgi Protein-Associated Protein; Phospholipase/Transphosphatidylase; Phospholipase D Alpha; Phospholipase Protein; Phospholipase D Active Site Motif Domain Protein; Phospholipase; Phospholipase D Protein; Phospholipase/Phosphatidylserine Synthase; Phospholipase D Superfamily Protein
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILL RLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRW DTPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRAR GAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALR DRLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE ARELSDQAHRQSQG
Sequences:
>Translated_494_residues MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILL RLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRW DTPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRAR GAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALR DRLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE ARELSDQAHRQSQG >Mature_493_residues ARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTRLFPDGYDGPADPDEVGRILLR LSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGTNIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWD TPGHLEVDPRRIMPSQSYHPPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAIA RTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVLLITTGKSPSWFDQLTMDRARG AIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDDRVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRD RLVGHFLGVTGDSVTKARAEHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAEA RELSDQAHRQSQG
Specific function: Unknown
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55042; Mature: 54911
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTR CCCEEEEEECCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCC LFPDGYDGPADPDEVGRILLRLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGT CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHCCHHHHHHHCCC NIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWDTPGHLEVDPRRIMPSQSYH CEEEEECCCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCCCEEECHHHCCCCCCCC PPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI CCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEE ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVL EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE LITTGKSPSWFDQLTMDRARGAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDD EEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHEECCCCCCCCEEEEECCCHHCCC RVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRDRLVGHFLGVTGDSVTKARA CEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE HHCCEEEEHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH ARELSDQAHRQSQG HHHHHHHHHHHCCC >Mature Secondary Structure ARMRMTVFTPGETCWRTAPADRVAFLIDNEAYFTAAFEAIQKARRSILLLGWGFDPRTR CCEEEEEECCCCHHHCCCCCCEEEEEEECCHHHHHHHHHHHHHCCEEEEEEECCCCCCC LFPDGYDGPADPDEVGRILLRLSEARPDLDIRLLIWKSALPVSASQQFFPHKARSWFKGT CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCHHHCCHHHHHHHCCC NIKFRLDDQVPFGACHHQKVLVIDDRLAFCGGGDISVDRWDTPGHLEVDPRRIMPSQSYH CEEEEECCCCCCCCCCCCEEEEEECCEEEECCCCCEEECCCCCCCEEECHHHCCCCCCCC PPRHEVMMMVDGAAARALGDHFRERWRAAEPEPIEPPPDAGGDPWPDHVPPHIFGAEVAI CCHHHEEEEECCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEECCEEEE ARTSPAWRGAPLVEEIKALTLECIGKARDVIYLENQYFTSPLVAEALAARLAEPDGPEVL EECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCEEE LITTGKSPSWFDQLTMDRARGAIIWRLRAADVFGRFRAFYPTTSGGSNIIVHSKASIFDD EEECCCCCCHHHHHHHHHCCCEEEEEEEHHHHHHHHHEECCCCCCCCEEEEECCCHHCCC RVVRVGSANLNNRSFGFDTEIELGVEAQEEAARLHVSALRDRLVGHFLGVTGDSVTKARA CEEEECCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH EHGGLVGAVDALNRDGRLVPVDPSRRSHFEEFIAAYHVGDPAGVADSWRLGRRRERLFAE HHCCEEEEHHHCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH ARELSDQAHRQSQG HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA